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FIGURE 3 in Morphology and SSU rRNA gene sequence of the new brackish water ciliate, Anteholosticha pseudomonilata n. sp. (Ciliophora, Hypotrichida, Holostichidae) from Korea

FIGURE 3. The alignment of variable sites for SSU rRNA gene sequences of Anteholosticha pseudomonilata n. sp. and five congeners. Nucleotide position number is marked at the top of each aligned line. Missing sites are indicate by gaps (–) and the sites matched with A. pseudomonilata are represented with dots.

FIGURE 2 in Morphology and SSU rRNA gene sequence of the new brackish water ciliate, Anteholosticha pseudomonilata n. sp. (Ciliophora, Hypotrichida, Holostichidae) from Korea

FIGURE 2. Photomicrographs of Anteholosticha pseudomonilata n. sp. from live cells (A–E), and after protargol staining (F– H). (A, B) Ventral view of typical individuals. (C) Partial of dorsal view, to show the distribution of cortical granules (arrowheads) and dorsal bristles (arrows). (D) Ventral view showing macronuclear nodules (arrows) and micronuclei (arrowheads). (E) Posterior body, arrows mark the inclusions within cytoplasm. (F) Ventral view of the holotype specimen (the same individual as illustrated in 1D, E and 2G, H), arrow denotes anterior end of left marginal row. (G) Ventral view of mid-posterior portion, arrows and arrowheads show micronuclei and macronuclear nodules, respectively. (H) Anterior portion of ventral side, showing the buccal cirrus (arrow), frontoterminal cirri (arrowheads), and the right frontal cirrus (double-arrowheads). Scale bars = 50 µm.

FIGURE 1. Anteholosticha pseudomonilata n in Morphology and SSU rRNA gene sequence of the new brackish water ciliate, Anteholosticha pseudomonilata n. sp. (Ciliophora, Hypotrichida, Holostichidae) from Korea

FIGURE 1. Anteholosticha pseudomonilata n. sp. from live cells (A–C), and after protargol impregnation (D, E). (A) Ventral view of a typical individual. (B) Ventral view, arrows indicate the inclusions within cytoplasm at both cell ends. (C) Noting arrangement of cortical granules (arrows). (D, E) Ventral and dorsal views of the holotype specimen, showing the general infraciliature. Arrow in D marks the posterior end of the midventral complex. Arrowheads in E depict the "extra" dikinetids ahead of the right marginal row. AZM = adoral zone of membranelles; BC = buccal cirrus; EM = endoral membrane; FC = frontal cirri; FTC = frontoterminal cirri; LMR = left marginal row; Ma = macronuclei; Mi = micronuclei; MP = midventral pairs; PM = paroral membrane; PTC = pretransverse ventral cirri; RMR = right marginal row; TC = transverse cirri; 1-4 = dorsal kineties. Scale bars in (A) = 40 µm; in (D, E) = 30 µm.

FIGURE 9. Phylogram obtained with RAxML and the combined mitochondrial sequence data. Bootstrap values above nodes. See Table 1 in Stictonectes rebeccae sp. n. from the Iberian Peninsula, with notes on its phylogenetic position (Coleoptera, Dytiscidae)

FIGURE 9. Phylogram obtained with RAxML and the combined mitochondrial sequence data. Bootstrap values above nodes. See Table 1 for localities.

FIGURE 3 Bayesian tree inferred from SSU gene rDNA sequences. Posterior probabilities exceeding 50 in A review of the genus Trischistoma Cobb, 1913 (Nematoda: Enoplida), with descriptions of four new species from New Zealand

FIGURE 3 Bayesian tree inferred from SSU gene rDNA sequences. Posterior probabilities exceeding 50% are given on appropriate clades. Nematode species, GenBank numbers are listed for each taxon.

FIGURE 4 Bayesian tree inferred from LSU gene rDNA sequences. Posterior probabilities exceeding 50 in A review of the genus Trischistoma Cobb, 1913 (Nematoda: Enoplida), with descriptions of four new species from New Zealand

FIGURE 4 Bayesian tree inferred from LSU gene rDNA sequences. Posterior probabilities exceeding 50% are given on appropriate clades. Nematode species and GenBank numbers are listed for each taxon if known.

FIGURE 3 in Linking operational clustered taxonomic units (OCTUs) from parallel ultra sequencing (PUS) to nematode species

FIGURE 3. Numbers of OCTUs formed at 99% within-OCTU similarity for each recovered nematode species. Brackets group species by the persistence (Always, Often, Never) of Head-Tail structure of OCTUs. Error bars indicate standard deviation across 7 metagenetic datasets.

FIGURE 5 in Linking operational clustered taxonomic units (OCTUs) from parallel ultra sequencing (PUS) to nematode species

FIGURE 5. Estimated (using the Head-Tail guidelines) number of nematode species from OCTUs generated at 99% within-OCTU similarity for sequencing reads recovered from soil, litter, and canopy habitats at La Selva Biological Station in Costa Rica.

FIGURE 2 in Linking operational clustered taxonomic units (OCTUs) from parallel ultra sequencing (PUS) to nematode species

FIGURE 2. Number of nematode species recovered using different levels of within-OCTU (operational clustered taxonomic units) similarity. Bars represent means across 7 metagenetic datasets. Error bars indicate standard deviation. Note: out of 41 used nematode species, three did not amplify (Porazinska et al. 2009a).

FIGURE 4 in Linking operational clustered taxonomic units (OCTUs) from parallel ultra sequencing (PUS) to nematode species

FIGURE 4. An example of OCTUs generated at 99% within-OCTU similarity matching Bursaphelenchus seani illustrating Head-Tail structure associated with the presence of within-species/individual variation of the SSU repeats. OCTUPUS generates a series of indices allowing OCTU ranking. When ranked by "Bit Score" and Reads, OCTUs can be divided into two categories: 1. Head – a single OCTU (27) that contains most abundant (63) and most common sequencing reads and matches a database (DB match) sequence (B. seani 175) at the highest value of bit score (525), Evalue and % Similarity (100) across the OCTU length. 2. Tail – many OCTUs each with fewer than the Head OCTU reads and lower values of bit score and % similarity.

FIGURE 1 in Linking operational clustered taxonomic units (OCTUs) from parallel ultra sequencing (PUS) to nematode species

FIGURE 1. Nematode OCTUs generated at different levels of within-OCTU similarity. Points represent the means across 7 metagenetic datasets, bars represent standard deviation.

FIGURE 4. Bayesian tree inferred from LSU gene DNA sequences. Posterior probabilities exceeding 50 in Laimaphelenchus persicus n. sp. (Nematoda: Aphelenchoididae) from Iran

FIGURE 4. Bayesian tree inferred from LSU gene DNA sequences. Posterior probabilities exceeding 50% are given on appropriate clades. Nematode species and GenBank numbers are listed for each taxon.

FIGURES 14–22 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURES 14–22. Servaea incana (cont.) 14 known and predicted distribution; 15–20 male palp (15–17 'light' male and 19–20 'dark' male; 21 anterior view of geniculate male chelicera; 22 anterior view of rounded female chelicera. Scale: 0.2 mm

FIGURES 39–46. Servaea spinibarbis. 39–40 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURES 39–46. Servaea spinibarbis. 39–40 dorsal view (39 female, 40 male); 41–42 female genitalia (41 dorsal view of cleared specimen, 42 ventral view of external characteristics); 43–45 male palp (43 ventral view, 44 anterior lateral view, 45 posterior lateral view); 46 known and predicted distribution. Scale: total body 1 mm; remainder 0.2 mm.

FIGURES 23–30. Servaea melaina n in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURES 23–30. Servaea melaina n. sp. 23–24 dorsal view (23 female, 24 male); 25–26 female genitalia (25 dorsal view of cleared specimen, 26 ventral view of external characteristics); 27–29 male palp (27 ventral view, 28 anterior lateral view, 29 posterior lateral view); 30 known and predicted distribution. Scale: total body 1 mm; remainder 0.2 mm

FIGURES 47–54. Servaea villosa. 47–48 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURES 47–54. Servaea villosa. 47–48 dorsal view (47 female, 48 male); 49–50 female genitalia (49 dorsal view of cleared specimen, 50 ventral view of external characteristics); 51–53 male palp (51 ventral view, 52 anterior lateral view, 53 posterior lateral view); 54 known and predicted distribution. Scale: total body 1 mm; remainder 0.2 mm.

FIGURE 5 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURE 5. Phenetic tree resulting from Neighbour Joining analysis inferred from the COI data-set. Branch lengths are proportional to genetic differences (see scale bar).

FIGURES 6–13. Servaea incana. 6–9 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURES 6–13. Servaea incana. 6–9 dorsal view (6 'light' female and 7 'dark' female; 8 'light' male and 9 'dark' male); 10– 14 female genitalia (10 dorsal view of cleared holotype of S. incana, 11 ventral view of external characteristics of holotype of S. incana; 12 dorsal view of cleared lectotype of S. vestita, 13 ventral view of external characteristics of lectotype of S. vestita). Scale: total body 1 mm; remainder 0.2 mm.

FIGURE 3 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURE 3 General anatomy of the female reproductive tract showing the two patterns observed. A. Servaea incana, S. vestita, S. villosa and S. zabkai. B. S. melaina, S. narraweena and S. spinibarbis.

FIGURE 4 in Revision of Australian jumping spider genus Servaea Simon 1887 (Aranaea: Salticidae) including use of DNA sequence data and predicted distributions

FIGURE 4. Spinning biplot for the males of S. spinibarbis (X), S. narraweena (Z) and S. melaina (Y) based on eight morphological characters showing the second and fourth dimensions.