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Fig 4 AAVrg open loop, in Regulation of REM Sleep by Inhibitory Neurons in the Dorsomedial Medulla
<p>Sleep recordings for AAVrg open loop experiments. Associated with Figure 4.</p>
Fig 1 ChR2 open loop, in Regulation of REM Sleep by Inhibitory Neurons in the Dorsomedial Medulla
<p>Sleep recording data for 120 s optogenetic stimulation experiments. Associated with Figure 1.</p>
WildfireDB: An Open-Source Dataset Connecting Wildfire Spread with Relevant Determinants
<p>Modeling fire spread is critical in fire risk management. Creating data-driven models to forecast spread remains challenging due to the lack of comprehensive data sources that relate fires with relevant covariates. We present the first comprehensive and open-source dataset that relates historical fire data with relevant covariates such as weather, vegetation, and topography. Our dataset, named <em>WildfireDB</em>, contains over 17 million data points that capture how fires spread in the continental USA in the last decade. The paper accompanying this dataset is part of the 2021 Neural Information Processing Systems (NeurIPS) Dataset and Benchmark Track. The paper describes the algorithmic approach used to create and integrate the data, describe the dataset, and present benchmark results regarding data-driven models that can be learned to forecast the spread of wildfires.</p> <p> </p> <p>Please see https://colab.research.google.com/drive/1cm2Z4E0HzXMAcuUrE26wHXL2FS_pIj3t?usp=sharing for an introduction about how to load the database using python (pandas).</p>
FIGURE 4. Eugenia acutata. A. Leaf twig with opened flowers. B. Inflorescence with flowers bud. C in Taxonomic monograph of Eugenia sect. Schizocalomyrtus (Myrtaceae: Myrteae), a group within Eugenia with unusual flowers
FIGURE 4. Eugenia acutata. A. Leaf twig with opened flowers. B. Inflorescence with flowers bud. C. Fruits. (A: A.C. Leonello s.n.; B: M. Verdi 6538; C: N.M. Ivanauskas 5020).
Subspecies and Distribution. P. g. gymnocercus Fischer, 1814 — subtropical grasslands of NE Argentina, SE Brazil, Paraguay, and Uruguay. Pg. antiquus Ameghino, 1889 — Pampas grasslands, monte scrublands, and open woodlands of C Argentina. P. g. lordi Massoia, 1982 — Chaco-montane tropical forest ecotone in NW Argentina (Salta & Jujuy Provinces). The subspecific status of the Pampas Fox from Entre Rios Province in Argentina remains unclear, and there are no data regarding the taxonomic position of Bolivian foxes. in Canidae
Subspecies and Distribution. P. g. gymnocercus Fischer, 1814 — subtropical grasslands of NE Argentina, SE Brazil, Paraguay, and Uruguay. Pg. antiquus Ameghino, 1889 — Pampas grasslands, monte scrublands, and open woodlands of C Argentina. P. g. lordi Massoia, 1982 — Chaco-montane tropical forest ecotone in NW Argentina (Salta & Jujuy Provinces). The subspecific status of the Pampas Fox from Entre Rios Province in Argentina remains unclear, and there are no data regarding the taxonomic position of Bolivian foxes.
Distribution. Widely but patchily distributed in open areas ranging from E Chad and N Central African Republic to extreme W Ethiopia, then south through most of E Africa to N South Africa, Namibia, and C Angola. in Manidae
Distribution. Widely but patchily distributed in open areas ranging from E Chad and N Central African Republic to extreme W Ethiopia, then south through most of E Africa to N South Africa, Namibia, and C Angola.
Open-Source Low-Cost Cardiac Optical Mapping System
<p>Optical fluorescence imaging data for <strong>Open-Source Low-Cost Cardiac Optical Mapping System </strong>PLOS ONE paper submission</p>
Open Education in European Libraries of Higher Education (2021 report dataset)
<p>In May-June 2021 SPARC Europe ran a survey among academic librarians in Europe. The survey was framed by the <a href="http://portal.unesco.org/en/ev.php-URL_ID=49556&URL_DO=DO_TOPIC&URL_SECTION=201.html">UNESCO Recommendation on OER</a>.</p> <p>Launched in May 2021, the survey, which targeted academic librarians across Europe, garnered over 230 responses from 28 countries. This data forms the basis for the<a href="https://zenodo.org/record/5734980"> 2021 report Open Education in European Libraries of Higher Education</a>.</p> <p>The survey questionnaire can be found <a href="https://zenodo.org/record/4892450">here</a>.</p> <p>The two-page summary of the key takeaways and recommendations from the report can be found here: <a href="https://zenodo.org/record/5862319">https://zenodo.org/record/5862319</a>.</p> <p>This dataset contains survey data anonymised and largely without free-text answers to ensure anonymity (.xlsx).</p> <p> </p> <p> </p> <p> </p> <p> </p> <p> </p> <p> </p>
Figure 2 in Snakes on an African plain: the radiation of Crotaphopeltis and Philothamnus into open habitat (Serpentes: Colubridae)
Figure 2 Chronogramsfor Crotaphopeltis and Philothamnus, with supportvalues fromthe BEAST analysis of theunconstrainedphylogeny (Fig. S1). Supported nodes (≥ 0.95 posterior probability) are indicated by black dots. Within Philothamnus, clade 1 denotes a group of species that comprise of predominantly forest species in the northern Afrotropical realm, and clade 2 a group of species that comprise open habitat specialists in southern Africa, as well as widespread habitat generalists in the rest of sub-Saharan Africa. Habitat reconstructions and terminal taxa are colour-coded according habitat classes; green (closed habitat), brown (open habitat) and green + brown (both open and closed habitats), with likelihood values for each state (Table 1) shown as a proportion in the pie charts at each node. Full-size DOI: 10.7717/peerj.11728/fig-2
Figure 1 in Snakes on an African plain: the radiation of Crotaphopeltis and Philothamnus into open habitat (Serpentes: Colubridae)
Figure 1 Habitat classification for genetic samples of Crotaphopeltis and Philothamnus species. Sampled localities were projected onto the biome map of Olson et al. (2001). Closed habitat (forest classes) is indicated by darker grey shades. Open habitat (including savanna) is shaded white to light grey. Full-size DOI: 10.7717/peerj.11728/fig-1
Input data for Open-data based carbon emission intensity signals for electricity generation in European countries -- top down vs. bottom up approach
<p>This dataset contains all necessary input data to reproduce the results of the paper "Open-data based carbon emission intensity signals for electricity generation in European countries -- top down vs. bottom up approach".</p>
Output data for Open-data based carbon emission intensity signals for electricity generation in European countries -- top down vs. bottom up approach
<p>This dataset contains all output data (results) of the paper "Open-data based carbon emission intensity signals for electricity generation in European countries -- top down vs. bottom up approach".</p>
Open Science Team 7 - Survey Raw Data
<p>Raw Data files (.csv and .xlxs) from Team 7's survey. All responses have been anonymized</p>
FIGURE 19. Lamproderma sauteri var. atrogriseum Meyl. A. Sporocarps. B. Open sporocarp. C in Revision of the Donald T. Kowalski's collections of Lamproderma (Myxomycetes, Amoebozoa) reveals twice higher species diversity
FIGURE 19. Lamproderma sauteri var. atrogriseum Meyl. A. Sporocarps. B. Open sporocarp. C. Columella and capillitium in transmitted light. D. Spores in transmitted light (edge view). E. Spores in transmitted light (top view). F. Spore by SEM. G. Details of spore ornamentation by SEM. Bars: A–B = 1 mm, C = 500 μm, D–F = 10 μm, G = 3 μm. A, C: coll. DTK 7073, B, F–G: coll. DTK 7116, D–E: coll. DTK 7145.
Documentos de Cine y Fotografía más citados en Open Syllabus, clasificados por tipo de documento y especialidad
<p>Listado de los documentos encontrados en la categoría de Cine y Fotografía como los más utilizados en los syllabus recogidos por la página.</p>
FIGURE 1. Primulina pingleensis. A. Habitat. B. Habit. C. Leaf blade. D. Bracts. E. Cyme. F. Opened corolla. G. Pistil. H. Flower, front view. I. Stamen, side view. J. Flower, top view. K. Flower, side view. L. Stigma. M. Disc. N in Primulina pingleensis (Gesneriaceae), a new species from Guangxi, China
FIGURE 1. Primulina pingleensis. A. Habitat. B. Habit. C. Leaf blade. D. Bracts. E. Cyme. F. Opened corolla. G. Pistil. H. Flower, front view. I. Stamen, side view. J. Flower, top view. K. Flower, side view. L. Stigma. M. Disc. N. Calyx lobe, adaxial view. Photos by Ying Qin.
A new marrellomorph arthropod from southern Ontario: A rare case of soft tissue preservation on a late Ordovician open marine shelf
<p>Ordovician open marine lagerstätten are relatively rare and widely dispersed, producing a patchy picture of the diversity and biogeography of non-mineralized marine organisms, and challenging our understanding of the fate of Cambrian groups. Here, for the first time, we report soft-bodied fossils, including a well-preserved marrellomorph arthropod, fragmentary carapaces, and macroalgae, from the late Ordovician (Katian) Upper Member of the Kirkfield Formation near Brechin, Ontario. The unmineralized elements and associated exceptionally preserved shelly biota were entombed rapidly in storm deposits that smothered the shallow, carbonate-dominated shelf. The marrellomorph, <em>Tomlinsonus dimitrii</em> gen. et sp. nov., is remarkable for its ornate, curving cephalic spines and pair of hypertrophied appendages, suggesting a slow-moving, benthic lifestyle. Re-evaluation of marrellomorph phylogeny using new data favours an arachnomorph affinity, though internal relationships are robust to differing outgroup selection. Clades Marrellida and Acercostraca are recovered, but the monophyly of Marrellomorpha is uncertain. The new taxon is recovered as sister to the Devonian <em>Mimetaster</em>, and, as the second youngest known marrellid, bridges an important gap in the evolution of this clade. More generally, the Brechin biota represents a rare window into Ordovician open marine shelf environments in Laurentia, representing an important point of comparison with contemporaneous lagerstätten from other paleocontinents, with great potential for further discoveries.</p>
FIGURES 2–14 in Unprecedented interweaving of single-helical and unequal double-helical chains into chiral metal–organic open frameworks with multiwalled tubular structures
FIGURES 2–14. Stipesoculus productus sp. nov. 2, 5–14, ♂; 3, 4, ♀. 2, Habitus, antennae and legs partly removed; 3, 4, 5, abdominal segments V–VIII; 6, 7, pygophore; 8, 9, 10, right paramere; 11, 12, phallus and basal structure; 13, 14, phallosoma and vesica. 2, 7, 10, 12, lateral view; 3, 6, 8, 13, dorsal view; 5, 4, 9, 11, 14, ventral view. Scale bar of 2–5 = 1 mm; of 6–7 = 0.5 mm; of 8–14 = 0.25 mm.
Isotope-selective pore-opening in a flexible metal-organic framework
<p>This dataset contains raw data underlying the results related to the paper "Isotope-selective pore-opening in a flexible metal-organic framework".</p> <p> </p>
Dataset for Mistic: an open-source multiplexed image t-SNE viewer
<p>This link consists of 10 anonymized non-small cell lung cancer (NSCLC) field of Views (FoVs) to test Mistic.</p> <p><strong>Mistic</strong></p> <p>Understanding the complex ecology of a tumor tissue and the spatio-temporal relationships between its cellular and microenvironment components is becoming a key component of translational research, especially in immune-oncology. The generation and analysis of multiplexed images from patient samples is of paramount importance to facilitate this understanding. In this work, we present Mistic, an open-source multiplexed image t-SNE viewer that enables the simultaneous viewing of multiple 2D images rendered using multiple layout options to provide an overall visual preview of the entire dataset. In particular, the positions of the images can be taken from t-SNE or UMAP coordinates. This grouped view of all the images further aids an exploratory understanding of the specific expression pattern of a given biomarker or collection of biomarkers across all images, helps to identify images expressing a particular phenotype or to select images for subsequent downstream analysis. Currently there is no freely available tool to generate such image t-SNEs.</p> <p><strong>Links</strong></p> <p><br> <a href="https://github.com/MathOnco/Mistic">Mistic code</a></p> <p><a href="https://mistic-rtd.readthedocs.io/">Mistic documentation</a></p> <p><a href="https://www.biorxiv.org/content/10.1101/2021.10.08.463728v1">Paper</a></p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.