Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Construction of the axolotl cell landscape using combinatorial hybridization sequencing at single cell resolution [scRNA-seq]
GEO Series GSE201446. Ambystoma mexicanum; Homo sapiens; Mus musculus. 615 samples. Type: Expression profiling by high throughput sequencing.
Cell hashing enable sample multiplexing, multiplet identification and super-loading on droplet-based single cell RNA-sequencing platforms
GEO Series GSE108313. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Dissecting cell composition and cell-cell interaction network of human disease heart tissue by single-cell sequencing
GEO Series GSE121893. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Characterization of the single-cell (ES and MEF) transcriptional landscape by highly multiplex RNA-Seq
GEO Series GSE29087. Mus musculus. 96 samples. Type: Expression profiling by high throughput sequencing.
Precision targeting of beta-catenin induces tumor reprogramming and immunity in hepatocellular cancers [Single-cell RNA-seq hashtag immune]
GEO Series GSE270974. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state
GEO Series GSE214264. Mus musculus. 101 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Gene expression profile at single cell level of matched primary tumor and metastatic cells of breast cancer patient-derived xenograft models
GEO Series GSE211146. Homo sapiens. 2090 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics identifies stem cell-derived graft composition in a model of Parkinson’s disease.
GEO Series GSE132758. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of human MAIT cell transcriptional, functional and clonal diversity [Exp 3]
GEO Series GSE194188. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell analysis uncovers that metabolic reprogramming is essential for cardiomyocyte proliferation in the regenerating heart.
GEO Series GSE139218. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis of CD34+ Stem Cell-Derived Myeloid Cells Infected With Human Cytomegalovirus
GEO Series GSE124334. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell 10X Genomics Multiome Analysis of H3.3K4M Mutant Brain Samples
GEO Series GSE293881. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Dnmt3a haploinsufficiency transforms Flt3-ITD myeloproliferative disease into a rapid, spontaneous, and fully-penetrant acute myeloid leukemia (Single Cell RNA-Seq)
GEO Series GSE77847. Mus musculus. 96 samples. Type: Expression profiling by high throughput sequencing.
Absolute Scaling of Single-Cell Transcriptomes Reveals Pervasive Hypertranscription in Adult Stem and Progenitor Cells
GEO Series GSE221184. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome analysis of Cyfip2 knockout mouse forebrain
GEO Series GSE248722. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
A single-cell and spatially resolved atlas of human breast cancers
GEO Series GSE176078. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome and surface protein expression analysis identify OX40+GITR+ pathogenic T helper 17 in anklyosing spondilytis [CITE-seq]
GEO Series GSE216884. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
HypoMap – a unified single cell gene expression atlas of the murine hypothalamus
GEO Series GSE208355. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of decidual immune cell landscape in the occurrence of adverse pregnancy outcomes induced by Toxoplasma gondii infection
GEO Series GSE254302. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling implicates the psychological stress-induced disruption of spermatogenesis
GEO Series GSE233950. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.