Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Single-cell transcriptional profiles of different tissue-derived myeloid cells from naïve and MDA-MB-231 tumor-bearing humanized mice
GEO Series GSE217499. Homo sapiens; Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Targeting T cell plasticity by pooled single cell CRISPR-screening in preclinical models of kidney and gut inflammation
GEO Series GSE267740. Mus musculus; Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell transcriptomic studies of mouse colonic lamina propria cells from wildtype or RORgtS182A mutant mice
GEO Series GSE173887. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
A cis-regulatory atlas of maize single cells
GEO Series GSE155178. Arabidopsis thaliana; Zea mays. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Diverse homeostatic and immunomodulatory roles of immune cells in the developing mouse lung revealed at single cell resolution
GEO Series GSE147668. Mus musculus. 4052 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing reveals ulcerative colitis patients’ response to anti-TNF-α therapy
GEO Series GSE298464. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
RETRACTED: Decoding aging and maturation related transcriptome and methylome dynamics in mouse oocytes by single cell parellel sequencing technology
GEO Series GSE119906. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
single cell RNA-seq from Purkinje cell (ENCSR268IGT)
GEO Series GSE78355. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from GM12878 (ENCSR000AJC)
GEO Series GSE78310. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell dissection of multiomics changes and epigenetic regulations in human high-grade serous ovarian cancer
GEO Series GSE189955. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
TARGET-seq: novel method for single-cell mutational analysis and parallel RNA-sequencing [validation in cell lines; Figure 2 and Figure S3]
GEO Series GSE105451. Homo sapiens. 180 samples. Type: Expression profiling by high throughput sequencing.
single-cell RNA sequencing reveals the lymph node atlas of breast cancer metastases
GEO Series GSE188807. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A single-cell multi-modal ATAC + gene expression sequencing in tendinopathy
GEO Series GSE213803. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects (10 X V3)
GEO Series GSE141469. Mus musculus; Homo sapiens; Canis lupus familiaris. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of colonic epithelium reveals unexpected shifts in cellular composition and molecular phenotype in treatment-naïve adult Crohn’s disease
GEO Series GSE164985. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of KPC pancreatic tumor cells
GEO Series GSE126539. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Indexed single-cell RNA-seq of mensenchymal bone marrow cells
GEO Series GSE134098. Mus musculus. 91 samples. Type: Expression profiling by high throughput sequencing.
Conversion of Human Fibroblasts to Stably Self-Renewing Neural Stem Cells with a Single Zinc-Finger Transcription Factor
GEO Series GSE64882. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
A survey of human brain transcriptome diversity at the single cell level
GEO Series GSE67835. Homo sapiens. 466 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomes of the Regenerating Intestine Reveal a Revival Stem Cell
GEO Series GSE123516. Mus musculus. 196 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.