Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Integration of M. tuberculosis phenotype with single cell RNA-seq to interrogate host macrophage heterogeneity in vivo.
GEO Series GSE167232. Mus musculus; Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods
GEO Series GSE142286. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
single-nucleus RNA-seq of enriched retinal ganglion cells (RGCs) with RGC-specific overexpression of hOprm1 under optic nerve crush injury condition
GEO Series GSE248537. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging [CosMx Spatial]
GEO Series GSE290466. Homo sapiens. 92 samples. Type: Other.
Single-cell RNA sequencing revealed the transcriptional landscape and heterogeneity of macrophages in the intestinal tissues of WT and LncRNA17Rik knockout mice.
GEO Series GSE288190. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Characterization of the single-cell transcriptional landscape by highly multiplex RNA-Seq
GEO Series GSE21180. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Time-course single-cell and spatial transcriptomics of reovirus-induced myocarditis in neonatal mice
GEO Series GSE189636. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Identifies Key Components of Tumor Microenvironment for Extranodal Natural Killer/T-cell lymphoma
GEO Series GSE203663. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods (Cel_Seq)
GEO Series GSE118704. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Ultra-high throughput single-cell RNA sequencing by combinatorial fluidic indexing
GEO Series GSE168620. Mus musculus; Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of dermal leukocytes
GEO Series GSE223845. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Reconstruction of the decidual pathway in human endometrial cells using single-cell RNA-Seq
GEO Series GSE127918. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic Profiling of the Developing Cardiac Conduction System at Single-Cell Resolution
GEO Series GSE132658. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
10x single-cell RNAseq profiling of CD45+ melanoma-infiltrating leukocytes from APOE2 and APOE4 knock-in mice
GEO Series GSE146613. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Profiling of colonic wounds and intact tissues in Hgfac WT and KO mice
GEO Series GSE235741. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Estrogen-induced cell cycle arrest as an unexpected outcome of aromatase inhibitor-resistance: Insights from single-cell analysis of a patient-derived xenograft model
GEO Series GSE156752. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Integrating whole transcriptome assays on a lab-on-a-chip for single cell gene profiling
GEO Series GSE6941. Mus musculus. 16 samples. Type: Expression profiling by array.
Simultaneous trimodal single cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
GEO Series GSE158013. Homo sapiens. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Invitro_scATAC]
GEO Series GSE173934. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptional profiles of BM, PB and lung neutrophils from naïve (C57BL/6J), AT3, and AT3-gcsf tumor-bearing mice
GEO Series GSE217595. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.