Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
249
datasets available to search
ShareScore release 0.9.0
Dataset results
249 results for “3D Structure”
Consticted migration is associated with stable 3D genome structure differences in cancer cells (RNA-Seq)
GEO Series GSE143677. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Neonatal Hypothyroidism Rearranges the 3D Chromatin Structure in the Liver
GEO Series GSE252574. Mus musculus. 2 samples. Type: Other.
Two enhancers synergistically regulate HoxB genes expressions and retinoic acid-induced early ESCs differentiation through 3D chromatin structure
GEO Series GSE165725. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
H3S10-phosphorylation spreading in mitosis stably preserves 3D chromatin structure and functions
GEO Series GSE252349. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
3D structure of the genome of F. graminearum strain PH-1
GEO Series GSE243436. Fusarium graminearum. 2 samples. Type: Other.
3D Chromosome Structure of SSCs, iGSCs and FGSCs
GEO Series GSE135104. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Reprogramming of 3D genome structure underlying HSPC development in zebrafish [HiC]
GEO Series GSE262187. Danio rerio. 9 samples. Type: Other.
Uncovering changes in 3D-chromatin structure and dynamic gene expression during spermatogenesis [RNA-seq]
GEO Series GSE280547. Sus scrofa. 9 samples. Type: Expression profiling by high throughput sequencing.
Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer
GEO Series GSE148079. Homo sapiens. 51 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Uncovering changes in 3D-chromatin structure and dynamic gene expression during spermatogenesis [Hi-C]
GEO Series GSE280549. Sus scrofa. 6 samples. Type: Other.
3D genomics analysis identifies enhancer hijacking caused by structural alterations and extrachromosomal circular DNA formation [HiChIP]
GEO Series GSE228246. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
3D genomics analysis identifies enhancer hijacking caused by structural alterations and extrachromosomal circular DNA formation [ChIP-Seq]
GEO Series GSE228166. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Consticted migration is associated with stable 3D genome structure differences in cancer cells
GEO Series GSE143678. Homo sapiens. 43 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
3D genomic analysis reveals novel enhancer-hijacking caused by complex structural alterations that drive oncogene overexpression
GEO Series GSE228247. Homo sapiens. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Maternal vitamin D deficiency impairs heart formation in mouse offspring through a change in 3D-chromatin structure
GEO Series GSE162895. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Reprogramming of 3D genome structure underlying HSPC development in zebrafish [ATAC-seq]
GEO Series GSE262186. Danio rerio. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RNA surveillance controls 3D genome structure via stable cohesin chromosome interaction
GEO Series GSE85147. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 120 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Consticted migration is associated with stable 3D genome structure differences in cancer cells (Hi-C)
GEO Series GSE143676. Homo sapiens. 27 samples. Type: Other.
Predicting modulaters of TE-driven chromatin 3D structure (HiC)
GEO Series GSE248860. Homo sapiens. 10 samples. Type: Other.
Role of Top1 and 3D Genome structure in SARS-CoV-2 infection [Hi-C]
GEO Series GSE162612. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.