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779
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ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
Allele-specific H3K27me3, H3K27ac and Ctcf ChIP-seq in Smchd1 control and Smchd1 deleted female neural stem cells. [H3K27me3]
GEO Series GSE112045. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF occupancy in the mouse telencephalon and medial ganglionic eminence
GEO Series GSE105071. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming
GEO Series GSE123670. Mus musculus. 187 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Mapping of CTCF and CTCFL binding sites in 3T3 and p19 cells
GEO Series GSE103198. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome wide targeting of the epigenetic regulatory protein CTCF to gene promoters by the transcription factor TFII-I
GEO Series GSE60918. Mus musculus. 10 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning
GEO Series GSE142781. Mus musculus. 170 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Gene expression analysis of Drosophila melanogaster S2 cells after RNAi-mediated depletion of the insulator factor CTCF
GEO Series GSE12719. Drosophila melanogaster. 4 samples. Type: Expression profiling by array.
Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements
GEO Series GSE198763. Drosophila melanogaster. 44 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq analysis of CTCF binding sites in lymphocyte subsets [DN thymocytes]
GEO Series GSE41739. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Functional mutations form at CTCF-cohesin binding sites in melanoma due to uneven nucleotide excision repair across the motif
GEO Series GSE81945. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF and cohesin regulate chromatin loop stability with distinct dynamics
GEO Series GSE90994. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286984. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF binding in B cells and Plasmablasts
GEO Series GSE44637. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
De novo mutations in the genome organizer CTCF cause Intellectual Disability (RNA-Seq)
GEO Series GSE46831. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [cHi-C]
GEO Series GSE205778. Mus musculus. 20 samples. Type: Other.
Metabolic regulation of CTCF expression and chromatin association dictates starvation response in mice and flies
GEO Series GSE207692. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [RNA-seq]
GEO Series GSE198761. Drosophila melanogaster. 6 samples. Type: Expression profiling by high throughput sequencing.
Analysis of three-dimensional enhancer network regulated by CTCF in CD4+ T cells
GEO Series GSE243839. Mus musculus. 72 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF
GEO Series GSE260914. Mus musculus. 78 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
ChIP-chip assay on circular chromosome conformation capture (4C) genomic DNA sample from human telomerase-immortalized corneal epithelial (HTCE) cells with the specification of CTCF binding
GEO Series GSE84295. Homo sapiens. 1 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.