Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,411
datasets available to search
ShareScore release 0.9.0
Dataset results
1,411 results for “Cell States”
Single-cell chromatin accessibility identifies pancreatic islet cell type– and state-specific regulatory programs of diabetes risk [snATAC-seq]
GEO Series GSE160472. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SETDB1 Orchestrates Metabolic Reprogramming to Regulate Cell State Maintenance and Cell Fate Differentiation
GEO Series GSE270622. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Functional dissection of metabolic trait-associated variants in steady state and stimulated human skeletal muscle cells [II]
GEO Series GSE282190. Homo sapiens. 8 samples. Type: Other.
RB1 depleted pluripotent stem cell retinal organoids recapitulate state cell transitions of retinoblastoma development
GEO Series GSE173447. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
SMARCB1 loss interacts with neuronal differentiation state to block maturation and impact cell stability
GEO Series GSE157012. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (Sorted Bulk RNA-Seq)
GEO Series GSE108443. Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing.
RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells (miRNA-Seq)
GEO Series GSE79654. Mus musculus. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Gene exression in single T cells across division states.
GEO Series GSE119139. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Defining transcriptional signatures of human hair follicle cell states
GEO Series GSE129611. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Direct Induction of Neural Progenitor Cells Transiently Passes Through a Partially-reprogrammed State
GEO Series GSE76857. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state
GEO Series GSE214264. Mus musculus. 101 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Endothelin2 signaling in the neural retina promotes the endothelial tip cell state and inhibits angiogenesis
GEO Series GSE50059. Mus musculus. 8 samples. Type: Expression profiling by array.
A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment
GEO Series GSE120409. Homo sapiens; Mus musculus. 833 samples. Type: Expression profiling by high throughput sequencing; Other.
Genome-wide maps of chromatin state for H3.3 tagged cells
GEO Series GSE45023. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
MEK and GSK3β inhibition drives ES cells into a naive pluripotent state irrespective of their global methylation status
GEO Series GSE72302. Mus musculus. 16 samples. Type: Expression profiling by array.
Chromatin States in Human ES Cells Reveal Key Regulatory Sequences and Genes Involved in Pluripotency and Self-renewal
GEO Series GSE18292. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Neoantigen-targeted DC vaccine generates durable T cell responses exhibiting the full spectrum of differentiation states in NSCLC patients
GEO Series GSE240361. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing; Other.
MPP8 is essential for sustaining self-renewal of ground-state pluripotent stem cells
GEO Series GSE150926. Mus musculus. 110 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Bmp signaling maintains a mesoderm progenitor cell state in the mouse tailbud
GEO Series GSE101810. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A model that cancer cells’ metastatic competence is determined by their states
GEO Series GSE112038. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.