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Figure 3 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 3 - Overview of the maximum likelihood phylogram inferred from combined plastid data (atpF–atpH, psbK–psbI, psbA–rps19–trnH, matK, trnL–trnF). Major clades in the complete tree are collapsed. The corresponding figures showing details of subsections of the tree are indicated. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The ML tree is presented in its entirety in Suppl. material 6.
Figure 19 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 19 - A portion (Agrostidinae p.p., Holcinae, Loliinae and Poinae) of the maximum likelihood phylogram inferred from combined plastid data (atpF–atpH, psbK–psbI, psbA–rps19–trnH, matK, trnL–trnF). ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Slashes (//) identify a branch shortened for presentation. An indel in atpF–atpH is mapped onto the phylogram.
Figure 17 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 17 - A portion (Phalaridinae and Scolochloinae) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. The subdivisional classification of Phalaris follows Voshell et al. (2016). The backbone branch represented by ellipses is shown only in Fig. 2.
Figure 7 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 7 - A portion (part of Agrostidinae p.p.) of the maximum likelihood phylogram inferred from ITS+ETS data. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50%. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Placements of samples with asterisks (***) are incongruent in nrDNA and plastid trees. One indel in ETS is mapped onto the phylogram.
Figure 16 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 16 - A portion (Koeleriinae clade A, part of Koeleriinae clade B, Trisetum subsect. Sibirica and Brizinae p.p.) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown.
Figure 14 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 14 - A portion (Aveninae s.str., Sesleriinae) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the upper left indicates the location in the overall tree of the portion shown.
Figure 18 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 18 - A portion (Agrostidinae p.p., Holcinae p.p. and Airinae p.p.) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the bottom left indicates the location in the overall tree of the portion shown. Backbone branches represented by ellipses are shown only in Fig. 2.
Figure 6 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 6 - A portion (Koeleriinae clade B) of the maximum likelihood phylogram inferred from ITS+ETS data. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50% or posterior probability <.5. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown.
Figure 23 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 23 - A portion (part of Agrostidinae p.p.) of the maximum likelihood phylogram inferred from combined plastid data (atpF–atpH, psbK–psbI, psbA–rps19–trnH, matK, trnL–trnF). ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50%. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Placement of the sample with asterisks (***) is incongruent in nrDNA and plastid trees. An indel in psbK–psbI is mapped onto the phylogram.
Figure 12 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 12 - A portion (part of Agrostidinae p.p. and Calothecinae p.p.) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown.
Figure 11 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 11 - A portion (part of Agrostidinae p.p.) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown.
Figure 10 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 10 - A portion (part of Agrostidinae p.p., Brizinae p.p., Calothecinae p.p. and Torreyochloinae) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Backbone branches represented by ellipses are shown only in Figure 2.
Figure 1 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 1 - Overview of the maximum likelihood phylogram inferred from ITS+ETS data. Major clades in the complete tree are collapsed. The corresponding figures showing details of subsections of the tree are indicated. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50%. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The ML tree is presented in its entirety in Suppl. material 3.
Figure 13 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 13 - A portion (Anthoxanthinae) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. The backbone branch represented by ellipses is shown only in Fig. 2.
Figure 5 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 5 - A portion (Sesleriinae, Aveninae s.str., Koeleriinae clade A) of the maximum likelihood phylogram inferred from ITS+ETS data. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50%. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Placements of samples with asterisks (***) are incongruent in nrDNA and plastid trees. Two indels in ETS and one in ITS are mapped onto the phylogram.
Figure 4 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 4 - A portion (Holcinae p.p., Agrostidinae p.p., Loliinae, Dactylidinae and Poinae) of the maximum likelihood phylogram inferred from ITS+ETS data. ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. A dash indicates bootstrap support <50%. No support is shown for branches with bootstrap support <50% and posterior probability <.5. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. The branch subtending Dactylidinae, with double slashes, is shortened for presentation. Backbone branches represented by ellipses are shown only in Figure 1.
Figure 20 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 20 - A portion (Calamagrostis pisinna, Lagurus, Aveninae s.str. and Koeleriinae clade A) of the maximum likelihood phylogram inferred from combined plastid data (atpF–atpH, psbK–psbI, psbA–rps19–trnH, matK, trnL–trnF). ML bootstrap support (left) and BI poster probabilities (right) are recorded along branches. No support is shown for branches with bootstrap support <50% and posterior probability <.5. A dash indicates bootstrap support <50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown. Placements of samples with asterisks (***) are incongruent in nrDNA and plastid trees. Slashes (//) identify a branch shortened for presentation. Two indels in psbK–psbI are mapped onto the phylogram.
Figure 15 from: Saarela JM, Bull RD, Paradis MJ, Ebata SN, Peterson PM, Soreng RJ, Paszko B (2017) Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1). PhytoKeys 87: 1-139. https://doi.org/10.3897/phytokeys.87.12774
Figure 15 - A portion (Lagurus, Koeleriinae clade B) of the maximum likelihood phylogram inferred from ITS data. ML bootstrap support is recorded along branches when >50%. The shaded area of the smaller tree on the left indicates the location in the overall tree of the portion shown.
◂Fig. 5 Cells of phylogenetically related strains (light microscopy). a Thecate cell in dorsal view. b Thecate cell in ventral view, note the sulcus extending onto the epitheca (arrow). c Putatively necrotic, thecate cell. d Thecate cell with one bulge on the epitheca (arrow), note that this was the only such cell among thousands of inspected cells. e, f Coccoid cells, apparently without thecae. g Two thecate cells enclosed in the parental theca. h Two connected, immotile cells enclosed in the parental thecae. j Lid of epitheca in dorsal-apical view (mirrored), composed of plates 2′‒4′, all intercalary plates and plates 2′′‒6′′. l‒m Same opened theca in ventral view (l) and dorsal view (m), note the sulcus extending onto the epitheca (arrow), the dorsal opening and all apical and all intercalary plates and plates 3′′‒5′′ remaining with the hypotheca. n Chloroplasts (as inferred from autofluorescence), note the space occupied by the nucleus. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′: postcingular plate; na: anterior intercalary plate. Scale= 10 µm in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
◂Fig. 5 Cells of phylogenetically related strains (light microscopy). a Thecate cell in dorsal view. b Thecate cell in ventral view, note the sulcus extending onto the epitheca (arrow). c Putatively necrotic, thecate cell. d Thecate cell with one bulge on the epitheca (arrow), note that this was the only such cell among thousands of inspected cells. e, f Coccoid cells, apparently without thecae. g Two thecate cells enclosed in the parental theca. h Two connected, immotile cells enclosed in the parental thecae. j Lid of epitheca in dorsal-apical view (mirrored), composed of plates 2′‒4′, all intercalary plates and plates 2′′‒6′′. l‒m Same opened theca in ventral view (l) and dorsal view (m), note the sulcus extending onto the epitheca (arrow), the dorsal opening and all apical and all intercalary plates and plates 3′′‒5′′ remaining with the hypotheca. n Chloroplasts (as inferred from autofluorescence), note the space occupied by the nucleus. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′: postcingular plate; na: anterior intercalary plate. Scale= 10 µm
Figure 5 from: Compton JA, Schrire BD, Könyves K, Forest F, Malakasi P, Mattapha S, Sirichamorn Y (2019) The Callerya Group redefined and Tribe Wisterieae (Fabaceae) emended based on morphology and data from nuclear and chloroplast DNA sequences. PhytoKeys 125: 1-112. https://doi.org/10.3897/phytokeys.125.34877
Figure 5 Wisteriopsisjaponica (Siebold & Zucc.) J.Compton & Schrire. A Habit B stipels C lower surface of leaflet D flower bud with bract and bracteoles E flower F1 calyx outer surface F2 calyx inner surface and detail of hairs G standard petal inner surface H wing petal I keel petal J staminal column K ovary and style L pods M pod interior and seed N ventral view of seed O lateral view of seed A–C, E–K from Maximowicz s.n.. 1863 D from Oldham 386, L–O from Togasi MSM1, 1950. Drawn by Margaret Tebbs.
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International Brain Laboratory public data
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OpenNeuro
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