Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
342
datasets available to search
ShareScore release 0.9.0
Dataset results
342 results for “Electron Microscopy”
Figure 2 in Cavichiana bromelicola: description of the immature stages of a sharpshooter using scanning electron microscopy, with biological notes (Insecta: Hemiptera: Cicadellidae: Cicadellini)
Figure 2. Immature stages of Cavichiana bromelicola, habitus, dorsal view. (a), first stadium. (b), second stadium. (c), third stadium. (d), fourth stadium. (e), fifth stadium.
Figure 3 in Cavichiana bromelicola: description of the immature stages of a sharpshooter using scanning electron microscopy, with biological notes (Insecta: Hemiptera: Cicadellidae: Cicadellini)
Figure 3. Scanning electron microscopy (SEM) of the head of a fourth stadium nymph (except Figure a) of Cavichiana bromelicola. (a), crown and pronotum of fifth stadium nymph, showing ocellar maculae, frontogenal sutures and median ecdysial line. (b), head, frontal view. (c), brochosomes, sensilla campaniformia and s. trichodea on frons. (d), gena with sensilla campaniformia, s. placodea and s. trichodea. (e), sensillum placodeum on gena, close to compound eye. (f), scape, pedicel and base of flagellum of antenna. (g), scape and pedicel, showing scale-like sculpturing. (h), scale-like sculpturing of pedicel at higher magnification. (i), part of face showing location of Evans organ. (j), Evans organ at higher magnification. (k), mouth parts. (l), apex of labium, showing sensilla basiconica and s. trichodea. br, brochosomes; ce, compound eye; cl, clypeus; cmi, cibarial muscular impression; cs, location of coronal suture; el, ecdysial line; eo, Evans organ; es, epistomal suture; fl, flagellum; fr, frons; fs, frontogenal suture; ge, gena; la, labium; lb, labrum; lo, lorum; mp, maxillary plate; ms, mandibular stylet; om, ocellar macula; pe, pedicel; pf, postfrons; pr, pronotum; sb, sensilla basiconica; sca, sensilla campaniformia; scp, scape; sls, scale-like sculpturing; sp, sensilla placodea; ss, subgenal suture; st, sensilla trichodea; ve, vertex; xs, maxillary stylet.
Figure 1 in Cavichiana bromelicola: description of the immature stages of a sharpshooter using scanning electron microscopy, with biological notes (Insecta: Hemiptera: Cicadellidae: Cicadellini)
Figure 1. (a), preoviposition egg of Cavichiana bromelicola showing ventral keel originating from anterior end (where the head of the embryo develops). (b), posterior end of egg (indicated by an asterisk in a) showing the chorion and an outer layer that is possibly derived from the ovary. (c), posterior end at higher magnification. (d), outer layer, which is very thin and thus easily damaged. ch, chorion; kl, ventral keel; ol, outer layer.
Figure 5 in Cavichiana bromelicola: description of the immature stages of a sharpshooter using scanning electron microscopy, with biological notes (Insecta: Hemiptera: Cicadellidae: Cicadellini)
Figure 5. Apical portion of abdomen of Cavichiana bromelicola, fourth stadium nymphs showing sexual dimorphism. (a), male. (b), female. go1, gonapophyses I; go2, gonapophyses II; py, pygofer. Notice fusion of gonapophyses I in male and separation in female.
Figure 4 in Cavichiana bromelicola: description of the immature stages of a sharpshooter using scanning electron microscopy, with biological notes (Insecta: Hemiptera: Cicadellidae: Cicadellini)
Figure 4. Ommatidia of nymphs of Cavichiana bromelicola. (a), first stadium. (b), second stadium. (c), third stadium. (d), fourth stadium. (e), fifth stadium. (f), sensillum coeloconicum, fourth stadium. oma, ommatidia; sco, sensilla coeloconica; st, sensilla trichodea.
Nomad-FAIR North-Remote-Tool Example Dataset Electron Microscopy
<p><strong>Dataset.Objective.Aperture.Energy.Slit.cdf.nx5.zip<br> Dataset.Objective.Aperture.Energy.Slit.dm3.cdf.zip<br> parser-focalseries-gatandm-cdf2nx5.py</strong><br> An example dataset for focus-series reconstruction (in-line holography).<br> The dataset supplements/comes from a research study <a href="https://doi.org/10.1016/j.ultramic.2021.113264">https://doi.org/10.1016/j.ultramic.2021.113264</a></p> <p><strong>em-sprint09-example.zip</strong></p> <p>This archive contains an example YAML file how metadata to e.g. 1613_Si_HAADF_610_kx.emd<br> (see below) are stored internally in a NOMAD OASIS when saving entries into the customized<br> ELN schema of the EM example that was developed in Sprint09 Area B in the FAIRmat project.<br> This eln_data.yaml file serves as an input to the dataconverter/em reader tool to supplement<br> the numerical data from the 1613_Si_HAADF_610_kx.emd file with metadata during the creation<br> of the emd.nxs file.</p> <p>Furtermore, this archive contains a Bruker BCF, a Velox EMD, and a Digital Micrograph v3 DM3<br> file. These file formats can be used as input to the dataconverter/em reader tool to inject<br> specific numerical data while creating an instance of an NXem-compliant NeXus file.</p> <p>The files have the following SHA256 checksum to verify their integriety:</p> <p>sha256sum eln_data.yaml<br> c0fd230336ce7cd8e2715445ea6af404202b4ab9d7e7186838748bd0559d536f</p> <p>sha256sum 46_ES-LP_L1_brg.bcf<br> bf5ca0f862af49726b848a8a60d73af6f1669990131288ac4b4ca6cb57e58aff</p> <p>sha256sum 1613_Si_HAADF_610_kx.emd<br> 6ed0e8b8c170a0ed307e5c877fd891767a38e636f4680632e9b00c46a2b963b9</p> <p>sha256sum EELS_map_2_ROI_1_location_4.dm3<br> b97850f6c6b100740813c34d20eda294ef66a6130daa42a6cf975c4572ff599c</p> <p> </p>
Automated Stitching of Noisy Scanning Electron Microscopy Images for Integrated Circuit Reverse Engineering
<p>A scanning electron microscope (<strong>SEM</strong>) usually creates images in the range of megapixel resolutions, but analyzing an IC layer requires resolutions in the gigapixel range. To create such large images, many individual images must be taken and then fused into one large image, which poses unique challenges: <strong>SEM</strong> images are affected by distortion due to charging effects and often exhibit high levels of noise and low contrast. One way of reducing the entry barrier to IC reverse engineering is to develop algorithms that can provide good results even in the case of suboptimal image quality, as can be produced by older, more readily available <strong>SEMs</strong>.</p> <p>This dataset contains images and additional information that has been cut from the PAINE paper due to length constraints. It also links to the thesis which served as base for the PAINE paper.</p>
Transmission-scanning electron microscopy of interface fracture of ferrite deformation twins
Open the record for dataset details and reuse information.
Atomic resolution high-angle annular dark field scanning transmission electron microscopy imaging of WSe2 encapsulated within hexagonal boron nitride
Open the record for dataset details and reuse information.
Airfuge Ultracentrifugation of Suspensions on Electron Microscopy Grids for Particle Enrichment - Video
<p>The video shows the ultracentrifugation of suspensions to enrich particles on electron microscopy grids for negative staining electron microscopy. For this purpose, an air-driven desktop ultracentrifuge, the Airfuge, is used with a fixed-angle rotor. Electron microscopy grids are placed in particular adaptors and the suspension is directly centrifuged on the grids. The method is used for diagnostic electron microscopy of infectious pathogens in clinical samples. The protocol of the procedure is available at https://doi.org/10.5281/zenodo.12731515.</p>
Electron microscopy images and morphometric data of SARS-CoV-2 variants in ultrathin plastic sections - Dataset 05 (SARS-CoV-2 Delta B.1.617.2)
<p>Dataset 05 comprises 153 transmission electron microscopy images of extracellular SARS-CoV-2 (isolate Delta B.1.617.2) particles in ultrathin plastic sections (45 nm) through Vero cell cultures. The images were recorded with dimensions of 4112 x 3008 pixels at a pixel size of 0.1641 nm and stored in 16-bit TIF format. It is recommended that an image viewer capable of reading 16-bit images, such as IrfanView, be used to visualize the images. The image files have been size calibrated and can be opened with the correct size calibration using ImageJ or Fiji with the Bioformats importer. A PDF document is provided with the image files, which describes the methods used for the generation of the images. Additionally, an XLSX file is included, offering morphometric particle measurements and the calculated statistical values for their distribution. The dataset was produced as dataset 05 for a comparative morphometric analysis of evolving SARS-CoV-2 variants. Further datasets used for the analysis are available in this repository (see dataset description document).</p>
Electron microscopy images and morphometric data of SARS-CoV-2 variants in ultrathin plastic sections - Dataset 03 (SARS-CoV-2 Alpha B.1.1.7)
<p>Dataset 03 comprises 147 transmission electron microscopy images of extracellular SARS-CoV-2 (isolate Alpha B.1.1.7) particles in ultrathin plastic sections (45 nm) through Vero cell cultures. The images were recorded with dimensions of 4112 x 3008 pixels at a pixel size of 0.1641 nm and stored in 16-bit TIF format. It is recommended that an image viewer capable of reading 16-bit images, such as IrfanView, be used to visualize the images. The image files have been size calibrated and can be opened with the correct size calibration using ImageJ or Fiji with the Bioformats importer. A PDF document is provided with the image files, which describes the methods used for the generation of the images. Additionally, an XLSX file is included, offering morphometric particle measurements and the calculated statistical values for their distribution. The dataset was produced as dataset 03 for a comparative morphometric analysis of evolving SARS-CoV-2 variants. Further datasets used for the analysis are available in this repository (see dataset description document).</p>
Electron microscopy images and morphometric data of SARS-CoV-2 variants in ultrathin plastic sections - Dataset 01 (SARS-CoV-2 Munich929)
<p>Dataset 01 comprises 150 transmission electron microscopy images of extracellular SARS-CoV-2 (isolate Munich929) particles in ultrathin plastic sections (45 nm) through Vero cell cultures. The images were recorded with dimensions of 4112 x 3008 pixels at a pixel size of 0.1641 nm and stored in 16-bit TIF format. It is recommended that an image viewer capable of reading 16-bit images, such as IrfanView, be used to visualize the images. The image files have been size calibrated and can be opened with the correct size calibration using ImageJ or Fiji with the Bioformats importer. A PDF document is provided with the image files, which describes the methods used for the generation of the images. Additionally, an XLSX file is included, offering morphometric particle measurements and the calculated statistical values for their distribution. The dataset was produced as dataset 01 for a comparative morphometric analysis of evolving SARS-CoV-2 variants. Further datasets used for the analysis are available in this repository (see dataset description document).</p>
FIGURE 5 in A new blind snake of the genus Letheobia (Serpentes: Typhlopidae) from Rwanda with redescriptions of L. gracilis (Sternfeld, 1910) and L. graueri (Sternfeld, 1912) and the introduction of a non-invasive preparation procedure for scanning electron microscopy in zoology
FIGURE 5. Preserved holotypes of Letheobia gracilis (ZMB 22030, total length 465.4 mm; outside) and L. akagerae sp. nov. (ZFMK 100862, total length 457.5 mm; centre); showing the extreme elongation in the new species.
FIGURE 2 in A new blind snake of the genus Letheobia (Serpentes: Typhlopidae) from Rwanda with redescriptions of L. gracilis (Sternfeld, 1910) and L. graueri (Sternfeld, 1912) and the introduction of a non-invasive preparation procedure for scanning electron microscopy in zoology
FIGURE 2. SEM images of lateral view of the head of the holotype of Letheobia gracilis (ZMB 22030; top), the holotype of L. akagerae sp. nov. (ZFMK 100862, centre), and a specimen of L. graueri (ZFMK 63138, bottom).
FIGURE 1 in A new blind snake of the genus Letheobia (Serpentes: Typhlopidae) from Rwanda with redescriptions of L. gracilis (Sternfeld, 1910) and L. graueri (Sternfeld, 1912) and the introduction of a non-invasive preparation procedure for scanning electron microscopy in zoology
FIGURE 1. SEM images of head scalation of the holotype of Letheobia gracilis (ZMB 22030; left), the holotype of L. akagerae sp. nov. (ZFMK 100862, centre), and a specimen of L. graueri (ZFMK 63138, right), showing the dorsal side (top row) and the ventral side (bottom row).
FIGURE 3 in A new blind snake of the genus Letheobia (Serpentes: Typhlopidae) from Rwanda with redescriptions of L. gracilis (Sternfeld, 1910) and L. graueri (Sternfeld, 1912) and the introduction of a non-invasive preparation procedure for scanning electron microscopy in zoology
FIGURE 3. SEM images showing details of the scale pits in (A) the holotype of Letheobia graueri (ZMB 27161) and (B) the holotype of L. gracilis (ZMB 22030).
FIGURE 3 in Description of the eggs of Psorophora ciliata and Psorophora ferox (Diptera: Culicidae, Aedini) from the east of the Brazilian state of Santa Catarina using scanning electron microscopy
FIGURE 3. Outer chorion of the egg of Psorophora ciliata, showing elongated tubercles in pentagons with margins delineated by short tubercles.
Liquid Phase Electron Microscopy of Bacterial Ultrastructure (2 of 2)
<p>Files from Axon Studios software from study D.radiodurans encapsulated in graphene liquid cells.</p>
OsO2 as the Contrast-Generating Chemical Species of Osmium-Stained Biological Tissues in Electron Microscopy
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.