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315
datasets available to search
ShareScore release 0.9.0
Dataset results
315 results for “gene diversity”
Diversity of Human Copy Number Variation and Multicopy Genes
GEO Series GSE24334. Homo sapiens. 5 samples. Type: Genome variation profiling by genome tiling array.
Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions
GEO Series GSE89275. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Immune Gene Diversity and STING1 Variants in Shaping Cancer Immunity Across Different Genetic Ancestry Populations
GEO Series GSE314074. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Tumor type and cell type-specific gene expression alterations in diverse pediatric central nervous system tumors identified using single nuclei RNA-seq
GEO Series GSE211362. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiling of the striatum in drug naïve Diversity Outbred mice
GEO Series GSE162732. Mus musculus. 416 samples. Type: Expression profiling by high throughput sequencing.
Sex Diversity in Proximal Tubule and Endothelial Gene Expression in Mice with Ischemic Acute Kidney Injury
GEO Series GSE144622. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
The marked diversity of unique cortical enhancers enables the generation of neuron-specific tools by Enhancer-Driven Gene Expression (EDGE)
GEO Series GSE112897. Mus musculus. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Early metazoan cell type diversity and the evolution of multicellular gene regulation
GEO Series GSE111068. Mnemiopsis leidyi; Trichoplax adhaerens; Amphimedon queenslandica. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Olfactory Sensory Neuron Diversity Beyond OR Genes in mice [scATACseq]
GEO Series GSE224601. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The Integrator complex controls the termination of transcription at diverse classes of gene targets
GEO Series GSE65090. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A gene silencing screen uncovers diverse tools for targeted gene repression in Arabidopsis
GEO Series GSE197063. Arabidopsis thaliana. 251 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Mouse Smartseq3 Data from Mold et al. Clonally Heritable Gene Expression Imparts a Layer of Diversity in Cell Types
GEO Series GSE252510. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Tumor type and cell type-specific gene expression alterations in diverse pediatric central nervous system tumors identified using single nuclei RNA-seq
GEO Series GSE241396. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
A scalable two-step genome editing strategy for generating full-length gene humanized mice at diverse genomic loci
GEO Series GSE294590. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Cell type-specific network analysis in Diversity Outbred mice identifies genes potentially responsible for human bone mineral density GWAS associations
GEO Series GSE269583. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Broccoli consumption alters microbial diversity, host and bacterial gene expression in mice fed a Total Western Diet [RNA-seq]
GEO Series GSE280358. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
Studying relative gene expression in Head and Neck (HNSCC) tumor under diverse culture conditions
GEO Series GSE63545. Homo sapiens. 4 samples. Type: Expression profiling by array.
Divergent immue responses to commensal Clostridia classified based on motility gene arrangement and flagellin diversity
GEO Series GSE290365. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Supplemental Material for "Overcoming challenges in variant calling: exploring sequence diversity in candidate genes for plant development in perennial ryegrass (Lolium perenne)"
<p>Supplemental materials to the manuscript.</p>
Targeted capture of hundreds of nuclear genes unravels phylogenetic relationships of the diverse Neotropical palm tribe Geonomateae.
<p>The tribe Geonomateae is a widely distributed group of 103 species of Neotropical palms which contains six ecologically important understory or subcanopy genera. Although it has been the focus of many studies, our understanding of the evolutionary history of this group, and in particular of the taxonomically complex genus <em>Geonoma</em>, is far from complete due to a lack of molecular data. Specifically, the previous Sanger sequencing-based studies used a few informative characters and partial sampling. To overcome these limitations, we used a recently developed Arecaceae-specific target capture bait set to undertake a phylogenomic analysis of the tribe Geonomateae. We sequenced 3,988 genes for 85% of the species of the tribe, including 84% of the species of the largest genus, <em>Geonoma</em>.<em> </em>Phylogenetic relationships were inferred using both concatenation and coalescent methods. Overall, our phylogenetic tree is highly supported and congruent with taxonomic delimitations although several morphological taxa were revealed to be non-monophyletic. It is the first time that such a large genomic dataset is provided for an entire tribe within the Arecaceae. Our study lays the groundwork not only for detailed macro- and micro-evolutionary studies within the group, but also sets a workflow for understanding other species complexes across the tree of life.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.