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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
NFIB Is a Pioneer Factor for DNA Replication by Acting as a Genome Organizer [Micro-C]
GEO Series GSE201864. Homo sapiens. 8 samples. Type: Other.
Homotypic clustering of L1 and B1 repeats organizes 3D genome
GEO Series GSE123806. Mus musculus. 8 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide analysis of Prz1 in fission yeast reveals a novel inhibitory role in flocculation and a conserved activating role in cell wall organization [ChIP-chip]
GEO Series GSE77760. Schizosaccharomyces pombe. 4 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Genome Organization Drives Chromosome Fragility [ChIP-seq]
GEO Series GSE99195. Mus musculus; Mus spretus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (HiChIP)
GEO Series GSE185883. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Systematic analysis of circadian gene expression mediated by epigenetic modification and 3D genome organization in Rice [Hi-C]
GEO Series GSE213090. Oryza sativa Indica Group. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_ATAC)
GEO Series GSE133879. Triticum aestivum. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Organization and replicon interactions within the highly segmented Borrelia burgdorferi genome
GEO Series GSE225771. Borreliella burgdorferi. 22 samples. Type: Other.
A novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads
GEO Series GSE52122. Danio rerio; Staphylococcus aureus. 45 samples. Type: Genome variation profiling by genome tiling array; Genome variation profiling by array.
Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features.
GEO Series GSE29183. Mus musculus; Drosophila melanogaster. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin condensation is independent from nuclear condensation in late-stage terminal erythropoiesis revealed from the dynamic three-dimensional genomic organizations [Hi-C]
GEO Series GSE184974. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription
GEO Series GSE40304. Escherichia coli str. K-12 substr. MG1655. 4 samples. Type: Expression profiling by array.
Transcription-dependent domain-scale 3D genome organization in dinoflagellates
GEO Series GSE153950. Breviolum minutum. 35 samples. Type: Other.
3D genome organization in the epithelial-mesenchymal transition spectrum [scHi-C_OVCA429shGRHL]
GEO Series GSE201918. Homo sapiens. 9 samples. Type: Other.
3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [T8_CUT&Tag]
GEO Series GSE228950. Mus musculus. 44 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters
GEO Series GSE215325. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
The 3D genomics of lampbrush chromosomes highlights the role of active transcription in chromatin organization
GEO Series GSE288415. Gallus gallus. 40 samples. Type: Other; Expression profiling by high throughput sequencing.
PfSET2 is involved in genome organization of var gene family in Plasmodium falciparum [HiC]
GEO Series GSE169028. Plasmodium falciparum 3D7. 4 samples. Type: Other.
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [ChIP-Seq]
GEO Series GSE143719. Oryza sativa. 98 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
PfSET2 is involved in genome organization of var gene family in Plasmodium falciparum [ChIPseq_HP1]
GEO Series GSE193761. Plasmodium falciparum 3D7. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.