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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
295
datasets available to search
ShareScore release 0.9.0
Dataset results
295 results for “midbrain”
ATAC-seq from midbrain (ENCSR384JBF)
GEO Series GSE172911. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNase-seq from midbrain (ENCSR706IDL)
GEO Series GSE90386. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptional profiling of myeloid cells (CD11b) and astrocytes (ACSA2) from the striatum and the midbrain of control and parkinsonian animals in the MPTP mouse model
GEO Series GSE244652. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR889XXJ)
GEO Series GSE83001. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR502WUI)
GEO Series GSE82745. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR253IEG)
GEO Series GSE82539. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ChIP-seq from midbrain (ENCSR129OJN)
GEO Series GSE82455. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RNAseq analysis on E14.5 midbrain material from mouse, Lmx1b fl/fl; Pitx3-Cre vs Lmx1v wt/wt;Pitx3-Cre littermates
GEO Series GSE121120. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
experiment in midbrain primary cultures, enriched in dopaminergic neurons
GEO Series GSE4551. Rattus norvegicus. 12 samples. Type: Expression profiling by array.
Single cell atlas of the human midbrain reveals cell state specific to Parkinson’s disease
GEO Series GSE157783. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
snRNA-Seq data of human iPSC-midbrain organoids without and with microglia
GEO Series GSE213288. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Parkinson’s Disease Genetic Risk in a Midbrain Neuronal Cell Line
GEO Series GSE109706. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Enhancer landscape of mouse developing midbrain at 11.5 dpc embryos
GEO Series GSE49652. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Purification of functional human ES/iPSC-derived midbrain dopaminergic progenitors using LRTM1
GEO Series GSE72875. Mus musculus. 4 samples. Type: Expression profiling by array.
Targeting genes of AP-2d in the mouse midbrain
GEO Series GSE27296. Mus musculus. 2 samples. Type: Expression profiling by array.
Modelling G2019S-LRRK2 sporadic Parkinson’s disease in 3D midbrain organoids
GEO Series GSE125234. Homo sapiens. 4 samples. Type: Expression profiling by array.
Differential expression between floor plate and ventral lateral region in E10.5 mouse embryo midbrain
GEO Series GSE25178. Mus musculus. 6 samples. Type: Expression profiling by array.
Biphasic activation of WNT signaling enhances the derivation of midbrain dopamine neurons for translational use [ChIP-seq]
GEO Series GSE162882. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An iPSC-derived midbrain dopaminergic neuronal model of aromatic amino acid decarboxylase (AADC) deficiency gives insight into neurodevelopmental disease features
GEO Series GSE153990. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Expression data from mouse ventral midbrain
GEO Series GSE55119. Mus musculus. 4 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.