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571 results for “sheath”
Optic Nerve Sheath Diameter / Eyeball Transverse Diameter Ratio and Prognosis of Sepsis Associated Encephalopathy
ClinicalTrials.gov study NCT05918705. IPD Sharing: NO. Countries: 1. Publications: 10.
Pediatric Caudal Injection Volume on Optic Nerve Sheath Diameter and Cerebral Oxygenation
ClinicalTrials.gov study NCT04491032. IPD Sharing: NO. Countries: 1. Publications: 1.
Effects of Combined Rectus Sheath and Ilioinguinal Nerve Block on Opioid Consumption in HALDN
ClinicalTrials.gov study NCT06941259. IPD Sharing: NO. Countries: 1. Publications: 2.
Optic Nerve Sheath Diameter Changes in Laparoscopic Cholecystectomy
ClinicalTrials.gov study NCT07162922. IPD Sharing: NO. Countries: 1. Publications: 1.
Optic Nerve Sheath Ultrasound During Electroconvulsive Therapy
ClinicalTrials.gov study NCT06607679. IPD Sharing: YES. Countries: 1. Publications: 10.
Assessment of Radial Artery Patency Following Catheterization With a 7F Sheath
ClinicalTrials.gov study NCT01753817. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Optic Nerve Sheath Diameters in Idiopathic Intracranial Hypertension Patients
ClinicalTrials.gov study NCT04603118. IPD Sharing: YES. Countries: 1. Publications: 29.
Data for "Do Alternate Wetting and Drying Irrigation Technology and Nitrogen Rates Affect Rice Sheath Blight?"
<p>See data_descriptor.html for a complete description of these data files and the experimental design.</p>
Exploring human splenic red pulp vasculature in virtual reality. Details of sheathed capillaries and the open capillary network. Supplementary material
<p>Supplementary files demonstrate our data in an interactive application. Please download und unpack the file, then launch file "start.bat". Please note that loading the original images takes some time. If you have a Steam VR headset, it is detected and used automatically.</p> <ol> <li><strong>Supplementary file 1 </strong><br> Localization of arteries and arterioles in ROI 4.<br> ROI 4 with all endothelia and some periarterial fibroblasts colored blue (CD34), smooth muscle alpha-actin (SMA) colored white and capillary sheaths depicted in green (CD271). Most arteries and arterioles can be localized by white color. White appears in a vertex of the blue reconstruction of CD34 staining, if a surface reconstructed for SMA labelling is closer than 8.75 µm to this vertex. Capillary sheaths connected to the selected arterioles (marked red in Suppl. file 2) are green and non-connected sheaths fed by other arterioles are dark green (CD271).</li> <li><strong>Supplementary file 2</strong><br> Relation of capillary sheaths to terminal arterioles in ROI4.<br> ROI 4 with all endothelia and some periarterial fibroblasts colored blue (CD34), selected terminal artery and terminal arterioles manually labelled red and capillary sheaths connected to the labelled arterioles in green (CD271). Non-connected sheaths fed by other arterioles are dark green (CD271). Follicular dendritic cells (FDCs) in follicles are light green (CD271). This file corresponds to Fig. 3 and to Suppl. Video 1-3.</li> <li><strong>Supplementary file 3</strong><br> Relation of capillary sheaths to terminal arterioles in ROI 2.<br> ROI 2 with all endothelia and some periarterial fibroblasts colored blue (CD34), selected terminal artery and terminal arterioles manually labelled red and capillary sheaths connected to the labelled arterioles in green (CD271). Non-connected sheaths fed by other arterioles are dark green (CD271). FDCs in follicles are light green (CD271). This file corresponds to Fig. 4a,b.</li> <li><strong>Supplementary file 4</strong><br> Relation of capillary sheaths to terminal arterioles in ROI 1.<br> ROI 1 with all endothelia and some periarterial fibroblasts colored blue (CD34), selected terminal artery and terminal arterioles manually labelled red and capillary sheaths connected to the labelled arterioles in green (CD271). Non-connected sheaths fed by other arterioles are dark green (CD271). FDCs in follicles are light green (CD271)</li> <li><strong>Supplementary file 5</strong><br> White pulp in 3D (ROI 3).<br> ROI 3 with all endothelia and some periarterial fibroblasts colored blue (CD34) and capillary sheaths in green (CD271). FDCs in follicles are light green (CD271). Arteries and terminal arterioles were not labelled.</li> <li><strong>Supplementary file 6 </strong><br> Sheathed capillaries exhibit short open-ended side branches.<br> ROI 2 with all endothelia and some periarterial fibroblasts colored blue (CD34) and with selected terminal artery and terminal arterioles labelled light blue. Capillary sheaths connected to the selected arterioles are green (CD271) and unconnected sheaths are dark green (CD271). The open-ended side branches of the selected sheathed capillaries were manually labelled red and are visualized in their entire length. This file corresponds to Fig. 4c.</li> <li><strong>Supplementary file 7</strong><br> Terminal arterioles may have a few unsheathed connections to the red pulp capillary network.<br> ROI 2 with all endothelia and some periarterial fibroblasts colored blue (CD34) and with selected terminal artery and terminal arterioles labelled light blue. Capillary sheaths connected to the selected arterioles are green (CD271) and unconnected sheaths are dark green (CD271). Connections from a terminal arteriole to the red pulp capillary network lacking sheaths were manually labelled red. A part of the capillary network after the connection is colored yellow. This file corresponds to Figs. 4d,e.</li> <li><strong>Supplementary file 8</strong><br> B-lymphocytes accumulate around terminal arteries and in/around capillary sheaths.<br> Lower part of ROI 2 with selected terminal artery and terminal arterioles colored blue and connected capillary sheaths in green (CD271). B-lymphocytes were digitally reduced in number and automatically labelled red (CD20). The B-cells accumulate around a terminal artery and around (and inside) capillary sheaths. This file corresponds to Fig. 6 and to Suppl. Video 4.</li> <li><strong>Supplementary file 9</strong><br> Reduction of B-lymphocytes is inevitable for visualization.<br> ROI 2 showing Suppl. file 8 integrated into the entire ROI 2. A large number of B-lymphocytes is present in the red pulp of ROI 2 (CD20 visualized in white). These cells are self-occluding and necessitate reducing B-lymphocytes as shown in Suppl. Fig. 8 to highlight accumulations.</li> <li><strong>Supplementary file 10</strong><br> Red pulp venule with potential connections to capillary network.<br> A red pulp venule with capillaries in ROI 1. Capillary and venous endothelium is shown in light blue (CD34). A part of a red pulp venule with potential contributing capillaries (CD34, blue) was manually selected in addition to a terminal arteriole (light red). The capillary sheaths connected with this arteriole are green (CD271). Non-connected sheaths are dark green (CD 271) and FDCs in follicles are light green (CD271). Capillaries from the red pulp network, which appear to be connected to the venule were manually colored red. Two of the red capillaries seem to originate from a sheathed capillary. This file corresponds to Fig. 5a-d and to Suppl. Video 5.</li> </ol> <p>Bounding boxes for all files have a side length of 1 mm with exception of Suppl. File 8 which is 800 (b) x 620 (h) x 614 (d) µm.</p> <p>As for videos, each video is in three quality settings:</p> <ul> <li>..._h264_8bit.mov is the most generic H.264 HQ setting. Should play everywhere, also with QuickTime.</li> <li>..._h265_10bit.mov is the 10 bit video version, encoded with HEVC encoder. Should be the same or higher quality with less size. Might not play everywhere.</li> <li>..._h264_8bit_small.mov is the H.264 LQ setting with much lower resolution, use this if your download bandwidth is limited.</li> </ul> <p>Now, there are 5 videos to supplement the submission:</p> <ol> <li><a href="https://zenodo.org/record/3993324/files/suppl%20video%201%20-%20sheath%20video%20r4%20full%20h264%208bit.mov">suppl video 1 - sheath r4 full .</a>.. shows the region ROI4 with full vasculature, similar to Fig. 3 of the manuscript,</li> <li><a href="https://zenodo.org/record/3993324/files/suppl%20video%202%20-%20sheath%20video%20r4%20select%20h264%208bit.mov">suppl video 2 - sheath r4 select .</a>... shows only the selection of the vasculature from ROI4, similar to Fig. 3 of the manuscript,</li> <li><a href="https://zenodo.org/record/3993324/files/suppl%20video%203%20-%20sheath%20video%20r4%20clipping%20h264%208bit.mov">suppl video 3 - sheath r4 clipping .</a>... showcases the front plane clipping technique we used for diagnostics in VR. This demonstrates the contents of Fig. 8 in dynamics.</li> <li><a href="https://zenodo.org/record/3993324/files/suppl%20video%204%20-%20sheath%20video%20r2%20bcell%20h264%208bit.mov">suppl video 4 - sheath bcell .</a>.. shows the selection of the B-cells to supplement Fig. 6 in the manuscript.</li> <li><a href="https://zenodo.org/record/3993324/files/suppl%20video%205%20-%20sheath%20video%20r1%20vene%20h264%208bit.mov">suppl video 5 - sheath r1 vene .</a>.. shows a red pulp venule and its apparent connections, this supplements Fig. 5 of the manuscript.</li> </ol>
Data from: De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways
Background: Sheath rot disease caused by Sarocladium oryzae is an emerging threat for rice cultivation at global level. However, limited information with respect to genomic resources and pathogenesis is a major setback to develop disease management strategies. Considering this fact, we sequenced the whole genome of highly virulent Sarocladium oryzae field isolate, Saro-13 with 82x sequence depth. Results: The genome size of S. oryzae was 32.78 Mb with contig N50 18.07 Kb and 10526 protein coding genes. The functional annotation of protein coding genes revealed that S. oryzae genome has evolved with many expanded gene families of major super family, proteinases, zinc finger proteins, sugar transporters, dehydrogenases/reductases, cytochrome P450, WD domain G-beta repeat and FAD-binding proteins. Gene orthology analysis showed that around 79.80 % of S. oryzae genes were orthologous to other Ascomycetes fungi. The polyketide synthase dehydratase, ATP-binding cassette (ABC) transporters, amine oxidases, and aldehyde dehydrogenase family proteins were duplicated in larger proportion specifying the adaptive gene duplications to varying environmental conditions. Thirty-nine secondary metabolite gene clusters encoded for polyketide synthases, nonribosomal peptide synthase, and terpene cyclases. Protein homology based analysis indicated that nine putative candidate genes were found to be involved in helvolic acid biosynthesis pathway. The genes were arranged in cluster and structural organization of gene cluster was similar to helvolic acid biosynthesis cluster in Metarhizium anisophilae. Around 9.37 % of S. oryzae genes were identified as pathogenicity genes, which are experimentally proven in other phytopathogenic fungi and enlisted in pathogen-host interaction database. In addition, we also report 13212 simple sequences repeats (SSRs) which can be deployed in pathogen identification and population dynamic studies in near future. Conclusions: Large set of pathogenicity determinants and putative genes involved in helvolic acid and cerulenin biosynthesis will have broader implications with respect to Sarocladium disease biology. This is the first genome sequencing report globally and the genomic resources developed from this study will have wider impact worldwide to understand Rice-Sarocladium interaction.
Figure 5 from: Simutnik SA, Perkovsky EE, Khomych MR, Vasilenko DV (2022) Two new genera of Encyrtidae (Hymenoptera, Chalcidoidea) with reduced ovipositor sheaths. Journal of Hymenoptera Research 89: 47-60. https://doi.org/10.3897/jhr.89.79180
Figure 5 R. voblenkoi, gen. et sp. nov., holotype female A body, lateral (hyp – hypopygium, st – strigil) B head, anterior part of the mesosoma, dorsolateral C forewing (f – marginal fringe, unc – uncus) D apex of gaster, lateral (cers – cercal setae). Scale bars: 0.2 mm (A–C); 0.1 mm (D).
Figure 4 from: Simutnik SA, Perkovsky EE, Khomych MR, Vasilenko DV (2022) Two new genera of Encyrtidae (Hymenoptera, Chalcidoidea) with reduced ovipositor sheaths. Journal of Hymenoptera Research 89: 47-60. https://doi.org/10.3897/jhr.89.79180
Figure 4 Rovnopositor voblenkoi gen. et sp. nov., holotype female A head, antenna, lateral (m – mandible, r – radicle) B piece of amber with holotype (arrow) C body, dorsolateral (ac – acropleuron, c – cercus, f – marginal fringe, ot – oblique truncation, pl3 – metapleuron, pp – prepectus, sp – spiracle) D body, ventral. Scale bars: 0.1 mm (A); 1 mm (B); 0.2 mm (C, D).
Figure 2 from: Simutnik SA, Perkovsky EE, Khomych MR, Vasilenko DV (2022) Two new genera of Encyrtidae (Hymenoptera, Chalcidoidea) with reduced ovipositor sheaths. Journal of Hymenoptera Research 89: 47-60. https://doi.org/10.3897/jhr.89.79180
Figure 2 A. puchkovi, gen. et sp.nov., holotype female A head, mesoscutum, dorsal B head, anterior part of the mesosoma, ventral (ot – oblique truncation) C body, ventrolateral (ac – acropleuron, pre – prepectus, str – subtegular region, v1 + v2 – ovipositor stylet) D subtegular region, ventrolateral. Scale bars: 0.2 mm (A, B); 0.5 mm (C).
Figure 1 from: Simutnik SA, Perkovsky EE, Khomych MR, Vasilenko DV (2022) Two new genera of Encyrtidae (Hymenoptera, Chalcidoidea) with reduced ovipositor sheaths. Journal of Hymenoptera Research 89: 47-60. https://doi.org/10.3897/jhr.89.79180
Figure 1 A cover slip at some angle to the surface of the amber, the inclusion is shown by an arrow BArchaeocercoides puchkovi, gen. et sp. nov., holotype female, body, dorsal (pst – parastigma, stv – stigmal vein) C syninclusion, crawler of CoccoideaDA. puchkovi, gen. et sp. nov., fossilized near the crawler of Coccoidea (arrow). Scale bars: 0.5 mm (A, B, D); 0.2 mm (C).
Figure 3 from: Simutnik SA, Perkovsky EE, Khomych MR, Vasilenko DV (2022) Two new genera of Encyrtidae (Hymenoptera, Chalcidoidea) with reduced ovipositor sheaths. Journal of Hymenoptera Research 89: 47-60. https://doi.org/10.3897/jhr.89.79180
Figure 3 A. puchkovi, gen. et sp. nov., holotype female A wings (cs – covering setae, lc– linea calva, unc – uncus) B body, lateral (v1 + v2 – ovipositor stylet) C apex of gaster, lateral (c – cercus, hyp– hypopygium, v3? – supposedly, ovipositor sheath) D apex of gaster, posterolateral. Scale bars: 0.2 mm (A, C, D); 0.5 mm (B).
Figure 7 in Life history and host utilization pattern of a strepsipteran parasite (Insecta: Strepsiptera) on the Blissine bugs (Hemiptera: Lygaeidae) living under dwarf bamboo leaf sheaths
Figure 7. Seasonal changes in frequency distribution of the strepsipteran parasites per host.
Figure 2 in Life history and host utilization pattern of a strepsipteran parasite (Insecta: Strepsiptera) on the Blissine bugs (Hemiptera: Lygaeidae) living under dwarf bamboo leaf sheaths
Figure 2. Seasonal changes in the proportions of Macropes obnubilus adults and nymphs.
Figure 3 in Life history and host utilization pattern of a strepsipteran parasite (Insecta: Strepsiptera) on the Blissine bugs (Hemiptera: Lygaeidae) living under dwarf bamboo leaf sheaths
Figure 3. Seasonal changes in the rate of Blissoxenos esakii parasitism.
A Study of ASTX727 in People With Malignant Peripheral Nerve Sheath Tumors (MPNST)
ClinicalTrials.gov study NCT04872543. IPD Sharing: YES. Countries: 1. Publications: 0.
Rectus Sheath Block as an Adjunct to General Anesthesia for Midline Laparotomy Pain
ClinicalTrials.gov study NCT07393763. IPD Sharing: NO. Countries: 1. Publications: 0.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
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