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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single-Cell RNA-seq Transcriptome Profiling from Male Germ Cells Isolated from Late Fetal and Neonatal Mouse Testes
GEO Series GSE124904. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome and Crosstalk Analysis Reveals Immune Alterations and Key Pathways in the Bone Marrow of Knee Osteoarthritis Patients
GEO Series GSE274018. Homo sapiens. 77 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptomics of human carotid artery plaques V2
GEO Series GSE294291. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics reveals lineage trajectory of the retinal ganglion cells in wild-type and Atoh7-null retinas
GEO Series GSE149040. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Integrative single cell and spatial transcriptomic analysis reveal reciprocal microglia-plasma cell crosstalk in the mouse brain during chronic Trypanosoma brucei infection
GEO Series GSE200642. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals prominent expression of IL-14, IL-18 and IL-32 in psoriasis
GEO Series GSE221648. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Tabula Muris: Transcriptomic characterization of 20 organs and tissues from Mus musculus at single cell resolution
GEO Series GSE109774. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing.
Landscape of single-cell transcriptomics of human placent in pathophysiological pregnancies
GEO Series GSE174399. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Single cell and population transcriptomics reveal epithelial remodeling in type 2-high asthma
GEO Series GSE145013. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA transcriptome reveals the underlying mechanisms by which losartan alleviates nitrogen mustard induced corneal injury
GEO Series GSE291819. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics in the lungs of CLEC5A-deficient mice with CLP-induced polymicrobial sepsis
GEO Series GSE249835. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A comprehensive transcriptome portrait of colorectal cancer derived organoid at single cell levels (Single cell RNA-seq)
GEO Series GSE120065. Homo sapiens. 52 samples. Type: Expression profiling by high throughput sequencing.
Validation of noise models for single-cell transcriptomics
GEO Series GSE54695. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Integrative Single-cell Transcriptomics and Single-cell Epigenomics Mapping the Developmental Dynamics of Fetal Retina
GEO Series GSE228370. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptome dynamics in stabilized pituitary gonadotrope cells [mini_dropseq]
GEO Series GSE111458. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas
GEO Series GSE111672. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive single cell transcriptome lineages of a proto-vertebrate
GEO Series GSE131155. Ciona intestinalis. 23 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of human fibrous dysplasia bone reveals a fibrotic transcriptome and somatic, mosaic GNAS R201H/C mutations in endothelial, perivascular, and stromal cells
GEO Series GSE301458. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing.
Targeted single-cell transcriptome readouts for high-throughput genetics and functional genomics
GEO Series GSE135497. Mus musculus; Homo sapiens. 57 samples. Type: Expression profiling by high throughput sequencing.
Temporal single cell transcriptome atlas of zebrafish anterior segment development reveals high degree of conservation between the trabecular meshwork and the annular ligament
GEO Series GSE218068. Danio rerio. 5 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.