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2,614
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ShareScore release 0.9.0
Dataset results
2,614 results for “RNA-seq analysis”
The effect of WB436B or siRNA towards STAT3 on the whole-transcriptome analysis with total RNA sequencing (RNA-Seq) in BxPC3 cells
GEO Series GSE217399. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of dark-induced senescence of the leaves of Ran-GDP and Ran-GTP overexpression transgenic plants
GEO Series GSE173375. Arabidopsis thaliana. 10 samples. Type: Expression profiling by high throughput sequencing.
RNA-SEQ analysis of postnatal Ret-positive (EGFP-labeled) nociceptive (NaV1.8 population) dorsal root ganglia L345 or L6S1 neurons.
GEO Series GSE77893. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq analysis of rice spikelets.
<p>R source code and input data used for RNA-Seq analysis of rice spikelets.</p>
Comprehensive RNA-seq analysis of colorectal cancer in a Korean cohort
<p>Colorectal cancer (CRC) is a leading cause of cancer-related mortality worldwide, and understanding the molecular mechanisms underlying CRC development and progression is critical for developing effective treatments. We performed RNA-Seq analysis of CRC and adjacent normal tissue samples from 214 Korean participants (comprising a total of 381 including 169 normal and 212 tumor samples) to investigate differential gene expression between the two groups. We identified a total of 19,575 expressed genes in CRC tissue and normal tissue, with 3,830 differentially expressed genes (DEGs) identified between the two groups. Functional annotation analysis revealed that upregulated DEGs were significantly enriched in pathways related to cell cycle, DNA replication, and IL-17, while downregulated DEGs were enriched in metabolic pathways. We also analyzed relationships between the clinical information and subtypes using Consensus Molecular Subtype (CMS). Our findings provide valuable insights into the molecular mechanisms underlying Korean CRC patients and suggest potential targets for developing new treatments for this deadly disease. The raw data and processed results of this study have been deposited in a public repository to enable further analysis and exploration.</p>
Integrated miRNA-mRNA transcriptomic analysis reveals antler growth regulatory network [RNA-seq]
GEO Series GSE163384. Cervus nippon. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq analysis of the TB-019 GSK M72/AS01E trial
GEO Series GSE102574. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of cells derived from breast milk
GEO Series GSE157785. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq Analysis of Prostate Cancer Cell Under Erastin Exposure
GEO Series GSE232034. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics analysis identifies intrinsic Trp53 driven metastatic breast cancer subtypes [RNA-seq]
GEO Series GSE301299. Mus musculus. 51 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq expression analysis of liver, adipose, skeletal muscle, heart, and pancreatic islets from DO founder strain mice fed high-fat, high-sugar diet. [Adipose]
GEO Series GSE266920. Mus musculus. 61 samples. Type: Expression profiling by high throughput sequencing.
Time course analysis of gene expression during hypoxia in several S. cerevisiae mutant strains using RNA-Seq
GEO Series GSE115171. Saccharomyces cerevisiae. 320 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of Slc39a8(neo/neo) versus wild-type mice: yolk sac, placenta and fetal liver, kidney, lung, heart and cerebellum
GEO Series GSE111080. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of THP-1 cell line upon knockdown of CHD4
GEO Series GSE106392. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq analysis of TBX18-driven reprogramming of ventricular myocytes to cardiac pacemaker cells
GEO Series GSE189815. Rattus norvegicus. 5 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq analysis of IbBBX24 transgenic sweet potato plants
GEO Series GSE140181. Ipomoea batatas. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq analysis of mice hypothalamus tissues.
GEO Series GSE162309. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing.
Gene expression analysis in islets from miR-203 TG mice [RNA-seq]
GEO Series GSE232473. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic Analysis Identifies B-Lymphocyte Kinase as a Therapeutic Target for Desmoplastic Small Round Cell Tumor Cancer Stem Cell-Like Cells [RNA-seq]
GEO Series GSE248761. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-SEQ analysis of E18.5 ALL Ret-positive (EGFP-labeled) male or female dorsal root ganglia neurons.
GEO Series GSE77891. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.