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10,016 results for “Observation”
FIGURE 2 in The advertisement call of Chiasmocleis (Syncope) carvalhoi (Nelson, 1975) (Anura Microhylidae), with taxonomic remarks based on new morphological observations of specimens from Peruvian Amazonia
FIGURE 2. One of the males of Chiasmocleis (Syncope) carvalhoi (MCP 14418, 9.74 mm snout-vent length, 23.5º C) recorded in this study. (A) Dorsolateral and (B) ventral views in life. (C) Ventral view of its right hand in preservative, white arrow indicates the palmar tubercle. (D) Lateral view of the head in preservative, white arrow indicates the tympanum. Scale bars = 0.5 mm.
FIGURE 1 in The advertisement call of Chiasmocleis (Syncope) carvalhoi (Nelson, 1975) (Anura Microhylidae), with taxonomic remarks based on new morphological observations of specimens from Peruvian Amazonia
FIGURE 1. Map of Loreto, Peru, with symbols showing the known localities of Chiasmocleis (Syncope) carvalhoi. Red diamond: Type locality: Estirón, río Ampiyacu. Black diamond: Estación Biológica José Álvarez Alonso, Reserva Nacional Allpahuayo-Mishana (EBJAA—RNAM). Black circles, specimens sequenced in other studies: 1. Puerto Almendra, Arboreto UNAP; 2. Umarital, río Ampiyacu; 3. Hacienda Zamora, Loreto, near to EBJAA—RNAM.
Microphotographs of ash particles obtained by VOLCAT observation in Shinmoedake and Sakurajima
<p>We developed VOLCAT (Visual Observation Laboratory Capturing Ash Transition), a new-field based instrument for automatic onsite imaging of ash particles from ongoing activity. This dataset contains all microphotographs of ash particles obtained by VOLCAT at Shinmoedake and Sakurajima, Japan. The captions for each photo folder is also included.</p>
Data for "A Phaseless Auxiliary-Field Quantum Monte Carlo Perspective on the UniformElectron Gas at Finite Temperatures: Issues, Observations, and Benchmark Study"
<p>Phaseless AFQMC data (input and output) for "A Phaseless Auxiliary-Field Quantum Monte Carlo Perspective on the UniformElectron Gas at Finite Temperatures: Issues, Observations, and Benchmark Study" </p> <p> </p> <p>data: contains raw qmc data</p> <p>figures: contains analysed data + plotting scripts.</p>
Brewster angle optical reflection observation of self-limiting nanoparticle monolayer self-assembly at a liquid/liquid interface
<p>Real-time optical reflection of incident <i>p</i>-polarized light near Brewster's angle shows that after drop-casting iron oxide nanoparticles (NPs) in heptane on top of a diethylene glycol (DEG) liquid substrate, an iron oxide NP layer forms at the DEG/heptane interface, and it self-limits to a monolayer even when there are excess NPs dispersed in the upper heptane phase. Most modes of NP self-assembly do not self-limit growth after the formation of a single monolayer. Observations are compared to a reflection model incorporating the reflectances expected at each interface. An effective medium model of the dielectric constant is used to model the reflectance of the NP layer at the DEG/heptane interface.</p>
FIGURES 36–38 in Review of the genus Beckhoplia Dombrow, 2005 with the description of fifteen new species from South Africa and observations on its biogeography (Coleoptera: Scarabaeidae: Melolonthinae: Hopliini)
FIGURES 36–38. General drawings of the pygidium of Beckhoplia Dombrow, 2005 species, in posterior view ♂♂. 36, upper margin moderately convex, linear medially, lateral margin subparallel in upper fifth, linearly attenuate apically; 37, upper margin slightly convex, lateral margin linearly attenuate apically; 38, upper margin moderately convex, linear medially, lateral margin slightly convex attenuate apically. Scale bar 1 mm
Low surface brightness observations with the Roman Telescope: The intracluster light
<p>There is a huge amount of astrophysical events that remain barely studied due to the lack of large, deep surveys. These events are those which are very faint and extend over large areas of the sky. For instance, only a handful of galaxy clusters have been observed with enough depth to witness the intracluster light (ICL), made up of stars that drift freely between galaxies in the cluster.<br> This light is key to understanding the assembly mechanisms occurring inside galaxy clusters. However, little is known about this light as it is very difficult to observe due to its low surface brightness.<br> The availability of deep surveys, such as the Hubble Frontier Fields, have expanded our knowledge of the properties, and therefore the origin, of the ICL. However, larger samples are needed to understand the evolution of this component with time and the efficiency of the different evolutionary processes inside galaxy clusters.<br> WFIRST appears as a unique tool to investigate the evolution of the ICL with time. Observing in the IR, brings the advantage that the stellar populations of the ICL are brighter in those wavelengths and their evolution with time is less dramatic compared to the optical bands, making studies of the fraction of ICL with redshift more consistent.<br> In this talk, I will present the latest advances in our understanding of the ICL. I will also talk about the lessons learned using this magnificent dataset that can be applied in future observations of the ICL with WFIRST.</p>
Aviation contrail cirrus and radiative forcing over Europe for six months in 2020 during COVID-19 compared with 2019: Observations and model results
<p>This file contains supporting information for a manuscript submitted for publication.</p> <p>Aviation contrail cirrus and radiative forcing over Europe for six months in 2020 during COVID-19 compared with 2019: Observations and model results </p> <p>U. Schumann, L. Bugliaro, and C. Voigt</p> <p>Corresponding author: Ulrich Schumann (Ulrich.schumann@dlr.de)</p> <p>For details see the README.txt</p> <p> </p> <p> </p>
Data from: Observed fitness may affect niche overlap in competing species via selective social information use
Social information transmission is important because it enables horizontal spread of behaviors, not only between conspecifics, but also between individuals of different species. Because interspecific social information use is expected to take place among species with similar resource needs, it may have major consequences for the emergence of local adaptations, resource sharing and community organization. Social information use is expected to be selective, but the conditions promoting it in an interspecific context are not well known. Here, we experimentally test whether pied flycatchers (Ficedula hypoleuca) use the clutch size of great tits (Parus major) in determining the quality of the observed individual and use it as a basis in decision-making. We show that pied flycatchers (Ficedula hypoleuca) copied or rejected a novel nest-site feature preference of great tits (Parus major), experimentally manipulated to exhibit high or low fitness (clutch size), respectively. Our results demonstrate that the social transmission of behaviors across species can be highly selective in response to observed fitness, plausibly making the phenomenon adaptive. In contrast with the current theory of species coexistence, overlap between realized niches of species could dynamically increase or decrease depending on the observed success of surrounding individuals.
Observation of RNA polymerase clusters in a live zebrafish embryo
<p>Data showing the distribution of RNA polymerase II with serine 5 phosphorylation in the C-terminal domain (CTD) of the subunit 1 (Pol II Ser5P) in a live zebrafish embryo. Images were acquired by instant-SIM microscopy, Pol II Ser5P was marked by fluorescently labeled antibody fragments (Fab) provided by the laboratory of Hiroshi Kimura, Tokyo Institute of Technology. Data were processed using FIJI.</p>
Data from: Statin use and cognitive function: population-based observational study with long-term follow-up
We aimed to evaluate the association between statin use and cognitive function. Cognitive function was measured with the Ruff Figural Fluency Test (RFFT; worst score, 0; best score, 175 points) and the Visual Association Test (VAT; low performance, 0–10; high performance, 11–12 points) in an observational study that included 4,095 community-dwelling participants aged 35–82 years. Data on statin use were obtained from a computerized pharmacy database. Analysis were done for the total cohort and subsamples matched on cardiovascular risk (N = 1232) or propensity score for statin use (N = 3609). We found that a total of 904 participants (10%) used a statin. Statin users were older than non-users: mean age (SD) 61 (10) vs. 52 (11) years (p<0.001). The median duration of statin use was 3.8 (interquartile range, 1.6–4.5) years. Unadjusted, statin users had worse cognitive performance than non-users. The mean RFFT score (SD) in statin users and non-users was 58 (23) and 72 (26) points, respectively (p<0.001). VAT performance was high in 261 (29%) statin users and 1351 (43%) non-users (p<0.001). However, multiple regression analysis did not show a significant association of RFFT score with statin use (B, −0.82; 95%CI, −2.77 to 1.14; p = 0.41) nor with statin solubility, statin dose or duration of statin use. Statin users with high doses or long-term use had similar cognitive performance as non-users. This was found in persons with low as well as high cardiovascular risk, and in younger as well as older subjects. Also, the mean RFFT score per quintile of propensity score for statin use was comparable for statin users and non-users. Similar results were found for the VAT score as outcome measure. In conclusion, statin use was not associated with cognitive function. This was independent of statin dose or duration of statin use.
Data from: A new theory of plant-microbe nutrient competition resolves inconsistencies between observations and model predictions
Terrestrial plants assimilate anthropogenic CO2 through photosynthesis and synthesizing new tissues. However, sustaining these processes requires plants to compete with microbes for soil nutrients, which therefore calls for an appropriate understanding and modeling of nutrient competition mechanisms in Earth System Models (ESMs). Here, we survey existing plant-microbe competition theories and their implementations in Earth System Models (ESMs). We found no consensus regarding the representation of nutrient competition and that observational and theoretical support for current implementations are weak. To reconcile this situation, we applied the Equilibrium Chemistry Approximation (ECA) theory to plant-microbe nitrogen competition in a detailed grassland 15N tracer study and found that competition theories in current ESMs fail to capture observed patterns and the ECA prediction simplifies the complex nature of nutrient competition and quantitatively matches the 15N observations. Since plant carbon dynamics are strongly modulated by soil nutrient acquisition, we conclude that (1) predicted nutrient limitation effects on terrestrial carbon accumulation by existing ESMs may be biased and (2) our ECA-based approach may improve predictions by mechanistically representing plant-microbe nutrient competition.
Data from: What keeps family physicians busy in Portugal? A multi-centre observational study of work other than direct patient contacts
Objectives: To quantify the time spent by family physicians (FP) on tasks other than direct patient contact, to evaluate job satisfaction, to analyse the association between time spent on tasks and physician characteristics, the association between the number of tasks performed and physician characteristics and the association between time spent on tasks and job satisfaction. Design: Cross-sectional, using time-and-motion techniques. Two workdays were documented by direct observation. A significance level of 0.05 was adopted. Setting: Multicentric in 104 Portuguese family practices. Participants: A convenience sample of FP, with lists of over 1000 patients, teaching senior medical students and first-year family medicine residents in 2012, was obtained. Of the 217 FP invited to participate, 155 completed the study. Main outcomes measured: Time spent on tasks other than direct patient contact and on the performance of more than one task simultaneously, the number of direct patient contacts in the office, the number of indirect patient contacts, job satisfaction, demographic and professional characteristics associated with time spent on tasks and the number of different tasks performed, and the association between time spent on tasks and job satisfaction. Results: FP (n=155) spent a mean of 143.6 min/day (95% CI 135.2 to 152.0) performing tasks such as prescription refills, teaching, meetings, management and communication with other professionals (33.4% of their workload). FP with larger patient lists spent less time on these tasks (p=0.002). Older FP (p=0.021) and those with larger lists (p=0.011) performed fewer tasks. The mean job satisfaction score was 3.5 (out of 5). No association was found between job satisfaction and time spent on tasks. Conclusions: FP spent one-third of their workday in coordinating care, teaching and managing. Time devoted to these tasks decreases with increasing list size and physician age.
Data from: Validation of the hospital frailty risk score in a tertiary care hospital in Switzerland: results of a prospective, observational study
Objectives: Recently, the Hospital Frailty Risk Score based on a derivation and validation study in the United Kingdom has been proposed as a low-cost, systematic screening tool to identify older, frail patients who are at greater risk of adverse outcomes and for whom a frailty-attuned approach might be useful. We aimed to validate this Score in an independent cohort in Switzerland. Design: Secondary analysis of a prospective, observational study (TRIAGE study). Setting: One 600-bed tertiary care hospital in Aarau, Switzerland Participants: Consecutive medical inpatients aged 75 years or older that presented to the emergency department or were electively admitted between October 2015 and April 2018. Primary and secondary outcome measures: The primary endpoint was all-cause 30-day mortality. Secondary endpoints were length of hospital stay, hospital readmission, functional impairment, and quality of life measures. We used multivariate regression analyses. Results: Of 4957 included patients, 3150 (63.5%) were classified as low risk, 1663 (33.5%) intermediate risk, and 144 (2.9%) high risk for frailty. Compared to the low-risk group, patients in the moderate risk and high-risk groups had increased risk for 30-day mortality (odds ratio [OR] 2.53, 95%CI 2.09 to 3.06, P<0.001 and OR 4.40, 95%CI 2.94 to 6.57, P<0.001) with overall moderate discrimination (area under the ROC curve 0.66). The results remained robust after adjustment for important confounders. Similarly, we found longer length of hospital stay, more severe functional impairment and a lower quality of life in higher risk group patients. Conclusion: Our data confirms the prognostic value of the Hospital Frailty Risk Score to identify older, frail people at risk for mortality and adverse outcomes in an independent patient population. Trial registration number: ClinicalTrials.gov; Identifier: NCT01768494
Data from: Using satellite AIS to improve our understanding of shipping and fill gaps in ocean observation data to support marine spatial planning
1. A key stage underpinning marine spatial planning (MSP) involves mapping the spatial distribution of ecological processes and biological features, as well the social and economic interests of different user groups. One sector, merchant shipping (vessels that transport cargo or passengers), however, is often poorly represented in MSP due to a perceived lack of fine-scale spatially explicit data to support decision making processes. 2. Here, using the Republic of Congo as an example, we show how publicly accessible satellite derived Automatic Identification System (S-AIS) data can address gaps in ocean observation data for shipping at a national scale. We also demonstrate how fine-scale (0.05 km2 resolution) spatial data layers derived from S-AIS (intensity, occupancy) can be used to generate maps of vessel pressure to provide an indication of patterns of impact on the marine environment and potential for conflict with other ocean-user groups. 3. We reveal that passenger vessels, offshore service vessels, bulk carrier and cargo vessels and tankers account for 93.7% of all vessels and vessel traffic annually, and that these sectors operate in a combined area equivalent to 92% of Congo's exclusive economic zone(EEZ) – far exceeding the areas allocated for other user-groups (conservation, fisheries and petrochemicals). We also show that the shallow coastal waters and habitats of the continental shelf are subject to more persistent pressure associated with shipping; and that the potential for conflict among user groups is likely to be greater with fisheries, whose zones are subject to the highest vessel pressure scores than with conservation or petrochemical sectors. 4. Synthesis and applications. Shipping dominates ocean use, and so excluding this sector from decision making could lead to increased conflict among user groups, poor compliance and negative environmental impacts. This study demonstrates how Satellite derived Automatic Identification System data can provide a comprehensive mechanism to fill gaps in ocean observation data and visualise patterns of vessel behaviour and potential threats to better support marine spatial planning at national scales.13-Feb-2018
Data from: An investigation of sepsis surveillance and emergency treatment on patient mortality outcomes: an observational cohort study
Objective. To determine the prevalence of initiating the sepsis 3-hour bundle of care and estimate effects of bundle completion on risk-adjusted mortality among ED patients screened-in by electronic surveillance. Materials and Methods. This was a multiple center observational cohort study conducted in 2016. The study population was comprised of patients screened-in by St. John Sepsis Surveillance Agent within four hours of ED arrival, had a sepsis bundle initiated, and admitted to hospital. We built multivariable logistic regression models to estimate impact of a 3-hour bundle completed within three hours of arrival on mortality outcomes. Results. Approximately 3% ED patients were screened-in by electronic surveillance within four hours of arrival and admitted to hospital. Nearly 7 in 10 (69%) patients had a bundle initiated, with most bundles completed within three hours of arrival. The fully-adjusted risk model achieved good discrimination on mortality outcomes (AUROC = .82, 95% CI = .79 to .85) and estimated 34% reduced mortality risk among patients with a bundle completed within three hours of arrival compared to non-completers. Discussion. The sepsis bundle is an effective intervention for many vulnerable patients, and likely to be completed within three hours after arrival when electronic surveillance with reliable alert notifications are integrated into clinical workflow. Beginning at triage, the platform and sepsis program enables identification and management of patients with greater precision, and increases the odds of good outcomes. Conclusion. Sepsis surveillance and clinical decision support accelerate accurate recognition and stratification of patients, and facilitate timely delivery of healthcare.
Data from: Observed forest sensitivity to climate implies large changes in 21st century North American forest growth
Predicting long-term trends in forest growth requires accurate characterisation of how the relationship between forest productivity and climatic stress varies across climatic regimes. Using a network of over two million tree-ring observations spanning North America and a space-for-time substitution methodology, we forecast climate impacts on future forest growth. We explored differing scenarios of increased water-use efficiency (WUE) due to CO2-fertilisation, which we simulated as increased effective precipitation. In our forecasts: (1) climate change negatively impacted forest growth rates in the interior west and positively impacted forest growth along the western, southeastern and northeastern coasts; (2) shifting climate sensitivities offset positive effects of warming on high-latitude forests, leaving no evidence for continued 'boreal greening'; and (3) it took a 72% WUE enhancement to compensate for continentally averaged growth declines under RCP 8.5. Our results highlight the importance of locally adapted forest management strategies to handle regional differences in growth responses to climate change.
Data from: Effects of ambient noise on detectability and localization of avian songs and tones by observers in grasslands
Probability of detection and accuracy of distance estimates in aural avian surveys may be affected by the presence of anthropogenic noise, and this may lead to inaccurate evaluations of the effects of noisy infrastructure on wildlife. We used arrays of speakers broadcasting recordings of grassland bird songs and pure tones to assess the probability of detection, and localization accuracy, by observers at sites with and without noisy oil and gas infrastructure in south-central Alberta from 2012 to 2014. Probability of detection varied with species and with speaker distance from transect line, but there were few effects of noisy infrastructure. Accuracy of distance estimates for songs and tones decreased as distance to observer increased, and distance estimation error was higher for tones at sites with infrastructure noise. Our results suggest that quiet to moderately loud anthropogenic noise may not mask detection of bird songs; however, errors in distance estimates during aural surveys may lead to inaccurate estimates of avian densities calculated using distance sampling. We recommend caution when applying distance sampling if most birds are unseen, and where ambient noise varies among treatments.
Data from: Passive microwave observations of inundation area and the area/stage relation in the Amazon River floodplain
Inundation patterns in Amazon River floodplains are revealed by analysis of the 37 GHz polarization difference observed by the Scanning Multichannel Microwave Radiometer on the Nimbus-7 satellite. Flooded area is estimated at monthly intervals for January 1979 through August 1987 using mixing models that account for the major landscape units with distinctive microwave emission characteristics. Results are presented separately for 12 longitudinal reaches along the Amazon River main stem in Brazil as well as for three major tributaries (the Jurua, Purus and Madeira rivers). The total area along the Amazon River main stem that was flooded (including both floodplain and open water) varied between 19000 and 91 000km2. The correlation between flooded area and river stage is used to develop a predictive relationship and reconstruct regional inundation patterns in the floodplain of the Amazon River main stem over the past 94 years of stage records (1903-1996). The mean flooded area along the Amazon River during this 94-year period was 46800km2, of which the openwater surfaces of river channels and floodplain lakes comprised about 20 700km2.
Data from: Accounting for observation processes across multiple levels of uncertainty improves inference of species distributions and guides adaptive sampling of environmental DNA
Understanding factors that influence observation processes is critical for accurate assessment of underlying ecological processes. When indirect methods of detection, such as environmental DNA, are used to determine species presence, additional levels of uncertainty from observation processes need to be accounted for. We conducted a field trial to evaluate observation processes of a terrestrial invasive species (wild pigs- Sus scrofa) from DNA in water bodies. We used a multi-scale occupancy analysis to estimate different levels of observation processes (detection, p): the probability DNA is available per sample (θ), the probability of capturing DNA per extraction (γ), and the probability of amplification per qPCR run (δ). We selected four sites for each of three water body types and collected 10 samples per water body during two months (September and October 2016) in central Texas. Our methodology can be used to guide sampling adaptively to minimize costs while improving inference of species distributions. Using a removal sampling approach was more efficient than pooling samples, and was unbiased. Availability of DNA varied by month, was considerably higher when water pH was near neutral, and was higher in ephemeral streams relative to wildlife guzzlers and ponds. To achieve a cumulative detection probability greater than 90% (including availability, capture, and amplification), future studies should collect 20 water samples per site, conduct at least 2 extractions per sample, and conduct 5 qPCR replicates per extraction. Accounting for multiple levels of uncertainty of observation processes improved estimation of the ecological processes and provided guidance for future sampling designs.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.