Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

11,105

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

11,105 results for “single cells”

Learn how ShareScore rates datasets ↗
geo24/100

Single cell RNA-sequencing reveal a murine gallbladder cell transcriptome atlas during the process of cholesterol gallstone formation

GEO Series GSE179524. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo24/100

Single-cell transcriptomic analysis reveals increased regeneration in diseased human inner ears

GEO Series GSE207817. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo24/100

Single-cell Transcriptome of Human Choroidal Endothelial Cells and Macrophages in Health and Atrophic Macular Degeneration

GEO Series GSE183320. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo24/100

A single cell transcriptome atlas of the developing zebrafish hindbrain [scRNA-Seq]

GEO Series GSE141427. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2019View details →
geo24/100

Single Cell RNA-Seq data for Cancer Stem Like Reversal Project

GEO Series GSE147326. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
geo24/100

Combined protein and transcript single cell RNA sequencing in human peripheral blood mononuclear cells

GEO Series GSE205320. Homo sapiens. 5 samples. Type: Other.

openGEO-OpenAug 2022View details →
geo24/100

High-resolution, noninvasive single-cell lineage tracing in mice and humans based on DNA methylation epimutations [LK_scMultiOmicseq; DNA methylome of single cells]

GEO Series GSE262218. Mus musculus. 576 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenNov 2024View details →
geo24/100

Single-Cell Analysis of Transcriptome and TCR Sequencing Reveals Immune Cell Atlas and Functional Heterogeneity of T Cell Repertoire in Murine Heart Transplantation

GEO Series GSE249989. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Single-cell RNA sequencing of meningiomas

GEO Series GSE183655. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

Deep Sequence Analysis of non-small cell lung cancer: Integrated analysis of gene expression, alternative splicing, and single nucleotide variations in lung adenocarcinomas with and without oncogenic

GEO Series GSE34914. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2012View details →
geo24/100

Integrative Analysis of Spatial Transcriptome with Single-cell Transcriptome and Single-cell Epigenome in Mouse Lungs after Immunization

GEO Series GSE190225. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Gastric single-cell RNA-sequencing of mice with Helicobacter pylori infection and/or KRAS-driven metaplasia

GEO Series GSE224840. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo24/100

Single-cell ATAC and RNA sequencing reveal pre-existing and persistent cells associated with prostate cancer relapse [RNA-seq]

GEO Series GSE169305. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2021View details →
geo24/100

Single cell RNA sequencing of Human Fetal Liver and Thymus samples

GEO Series GSE301043. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage

GEO Series GSE76408. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

Single-Cell RNA-Sequencing facilitates the effectiveness analysis of clinical-dose arsenic trioxide (ATO) treatment in reactivating V272M in AML patient and in primary AML PBMCs

GEO Series GSE182926. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2024View details →
geo24/100

Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (10 cell RT-PCR)

GEO Series GSE80726. Homo sapiens. 1051 samples. Type: Expression profiling by RT-PCR.

openGEO-OpenMar 2017View details →
geo24/100

Single-cell transcriptomic analysis of allergen-specific T cells in allergy and asthma [RNA-Seq]

GEO Series GSE146046. Homo sapiens. 95 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →
geo24/100

Single-cell analysis reveals the loss of progenitor subpopulation of valvular endothelial cells leads to functional mitral regurgitation

GEO Series GSE241947. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Single-cell RNA-seq of human liver samples

GEO Series GSE216584. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.