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2,614 results for “RNA-seq analysis”

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geo12/100

RNA-Seq analysis of hearts from NBCe1 Na-HCO3 cotransporter cardiac conditional knockout (K) vs wild-type (W) mice

GEO Series GSE115579. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2018View details →
geo12/100

Characterization of novel zinc finger protein ZNF414 DNA binding and gene regulatory activity by integrative analysis of ChIP-exo, ATAC-seq and RNA-seq data (ATAC-seq)

GEO Series GSE153769. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo12/100

RNA-seq analysis of the transcriptomic profiles of ATO+DAC-treated THP-1 cell lines expressing p53-R282W, vector control, or p53-R282W with IRF7 knockdown

GEO Series GSE269126. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2024View details →
geo12/100

RNA-seq analysis of gene expression in scramble and GPR126 knockdown colon cancer cells (HT-29)

GEO Series GSE106696. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2017View details →
geo12/100

RNA-seq Analysis on the Renal Tissue Injury in the Development of Goslings Gout

GEO Series GSE144723. Anser cygnoides. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo12/100

Complex in vivo RNA-seq analysis reveal reprogramming of Yersinia from virulent to persistent mode during infection [microarray I]

GEO Series GSE56475. Yersinia pseudotuberculosis; Yersinia pseudotuberculosis YPIII. 4 samples. Type: Expression profiling by array.

openGEO-OpenDec 2014View details →
geo12/100

RNA-seq analysis using A549 cells with FXR knockdown and control A549 cells with or without ionizing radiation treatment.

GEO Series GSE278872. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo12/100

RNA-Seq analysis of WT and PCD8 RNAi-21 mutant in response to light.

GEO Series GSE160607. Arabidopsis. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo12/100

RNA-seq analysis of jmj28-3 and genome-wide occupancy of JMJ28 in Arabidopsis

GEO Series GSE168893. Arabidopsis thaliana. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo12/100

RNA-seq analysis of αPD-1 treatment outcomes in IL-34 expressing or not expressing CT26 cell line

GEO Series GSE157602. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo12/100

RNA-seq analysis of primarily cultured neurospheres from FGF13cko and control mice

GEO Series GSE143173. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo12/100

RNA-seq analysis of miRNAs expression in chciken ALV-J-infected primary monocyte-derived macrophages (MDM) and uninfected control.

GEO Series GSE103206. Gallus gallus. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenAug 2017View details →
geo12/100

RNA-seq analysis of various strains of Mycobacterium tuberculosis under glycerol and acetate at acidic Ph

GEO Series GSE297253. Mycobacterium tuberculosis. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo12/100

RNA-seq analysis of K562 cells (K562-shX) with stable integration of a tet-inducible shRNA targeting a candidate (X) transcription factor from ENCODE/HudsonAlpha-MyersLab

GEO Series GSE33816. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2011View details →
geo12/100

RNA-seq analysis of Kdm6a deficient brains in mice

GEO Series GSE81251. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2017View details →
geo12/100

RNA-Seq analysis of islets from Akita mice treated with the SGLT2 inhibitor Dapagliflozin and wild-type controls

GEO Series GSE284078. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo12/100

RNA-seq analysis of YAP-overexpressing mouse embryonic fibroblasts in the context of reprogramming

GEO Series GSE131232. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2019View details →
geo12/100

RNA-seq analysis of WT, jmj28-3 in Arabidopsis

GEO Series GSE168891. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo12/100

RNA-seq analysis of p62 knockout in murine oral carcinoma MOC2 cells

GEO Series GSE309456. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo12/100

RNA-seq analysis using A549 cells with TRIM22 knockdown and control A549 cells with or without ionizing radiation treatment.

GEO Series GSE277805. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record