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6,234 results for “phenotypes”
Denoising Autoencoders for Phenotype Stratification (DAPS) Sample Trained Patient Data
<p>Data for: https://github.com/greenelab/DAPS</p>
FIGURE 1 in The limits of polymorphism in Liolaemus rothi: Molecular and phenotypic evidence for a new species of the Liolaemus boulengeri clade (Iguanidae, Liolaemini) from boreal Patagonia of Chile
FIGURE 1. Adult male of L. rothi. Photo J.A. Scolaro.
Tara Pacific Biomarker-Based Coral Phenotype Data Release - Pocillopora
<p>Those data correspond to the measurements of the phenotype signatures of <em>Pocillopora </em>colonies collected through 30 Pacific Islands. More precisely, six different biomarkers have been measured for each colony: Animal biomass, Symbiont biomass (normalized by milligram of protein and by centimeter squared), protein carbonylation, total antioxydant capacity, total carbohydrate content and mitochondrial DNA copy number.</p> <p>(XLS version with methodological references)</p>
Age-induced midbrain-striatum assembloid models early phenotypes of Parkinson's disease
Open the record for dataset details and reuse information.
FIGURE 1 in Phenotypic variation of Leptodactylus cupreus Caramaschi, São-Pedro and Feio, 2008 (Anura, Leptodactylidae)
FIGURE 1. Geographical distribution of Leptodactylus cupreus.
Fig. 4 in Phenotypic Study Of Population And Distribution Of The Poecilia Reticulata (Cyprinodontiformes, Poeciliidae) From Kyiv Sewage System (Ukraine)
Fig. 4. Biotope occupied by P. reticulata along the Bortnychi sewage drain; areas, where guppies were found have very weak current are marked with red circles (Nekrasova et al., 2021).
Fig. 3 in High and lowland dependent wing phenotypic variation of the dark blue tiger butterfly, Tirumala septentrionis (Butler, 1874) (Lepidoptera: Nymphalidae) with FE-SEM wing scales nanomorphology
Fig. 3. Centroid size analysis of (A) Forewing and (B) Hindwing of T. septentrionis.
Phenotypic and genotypic data of genomic selection study of spring frost tolerance of Norway spruce
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Impacts of a high fat diet on the metabolic profile and the phenotype of atrial myocardium in mice
<p>Aims: Obesity, diabetes and metabolic syndromes are risk factors of atrial fibrillation (AF). We tested the hypothesis that metabolic disorders have a direct impact on the atria favoring the formation of the substrate of AF.</p> <p>Methods & Results: Untargeted metabolomic and lipidomic analysis was used to investigate the consequences of a prolonged high fat diet (HFD) on mouse atria. Atrial properties were characterized by measuring mitochondria respiration in saponin-permeabilized trabeculae, by recording action potential with glass microelectrodes in trabeculae and ionic currents in myocytes using the perforated configuration of patch clamp technique and by several immuno-histological and biochemical approaches. After 16 weeks of HFD, obesogenic mice showed a vulnerability to AF. The atrial myocardium acquired an adipogenic and inflammatory phenotypes. Metabolomic and lipidomic analysis revealed a profound transformation of atrial energy metabolism with a predominance of long-chain lipid accumulation and beta-oxidation activation in the obese mice. Mitochondria respiration showed an increased use of palmitoyl-CoA as energy substrate. Action potentials were short duration and sensitive to the K-ATPdependent channel inhibitor, whereas K-ATP current was enhanced in isolated atrial myocytes of obese mouse.</p> <p>Conclusion:<em><strong> </strong></em>HFD transforms energy metabolism, causes fat accumulation, and induces electrical remodeling of the atrial myocardium of mice that become vulnerable to AF.</p> <p>Translational perspective: Understanding the link between metabolic diseases and atrial fibrillation is of major importance. One hypothesis claims that, in addition to shared co-morbidities, metabolic disorders favor the substrate of atrial fibrillation. Here we show that after prolonged high fat diet, the atrial myocardium becomes adipogenic, inflamed and vulnerable to atrial fibrillation. This tissue remodeling appears to result from an unbalance between uptake and oxidation of fatty acid resulting in long-chain lipid storage, activation metabolic-sensitive potassium channel and action potential shortening. Therefore, diet appears to be an important link between metabolic disorders and atrial fibrillation.</p>
FIGURE 1 in True branching and phenotypic plasticity in the planktonic cyanobacterium Dolichospermum brachiatum sp. nov. (Nostocales, Aphanizomenonaceae), from south-eastern Australia
FIGURE 1. Morphology of Dolichospermum brachiatum from Waranga Basin. Scale bars = 20 μm.
Figure 2 in Molecular and phenotypic data reveal a new Amazonian species of pit vipers (Serpentes: Viperidae: Bothrops)
Figure 2. Bothrops oligobalius sp. nov. from French Guiana. Photo by Maël Dewynter.
Figure 7 in Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
Figure 7. Prior phylogenetic analyses of Charadriiformes: Hackett et al. (2008).
Figure 4 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 4 Tityus C. L. Koch, 1836, telotarsi IV, showing ventral macrosetae A, C, E, G, I, K white light B, D, F, H, J, L UV light A, BTityus (Tityus) brazilae Lourenço & Eickstedt, 1984 (type II) (MZSP 75619) C, DTityus (Archaeotityus) clathratus C. L. Koch, 1844 (type I) (MZSP 31468) E, FTityus (Atreus) forcipula (Gervais, 1843) (type II) (MZSP) G, HTityus (Atreus) obscurus Gervais, 1843 (type I) (MNRJ 07610) I, JTityus (Tityus) serrulatus Lutz & Mello, 1922 (type II) (MZSP 28205) K, LTityus (Tityus) spelaeus sp. nov. (MZSP 74633) (type II). Observations = telotarsi I–IV ventral setae distribution: Type I = tuft of irregularly distributed setae. Type II = two discrete ventrosubmedian rows of setae. Scale bars: 500 μm.
Figure 14 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 14 Habitat of Tityus (Tityus) spelaeus sp. nov. in the Russão cave A inside landscape of the cave B females on the cave walls.
Figure 11 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 11 Tityus (Tityus) spelaeus sp. nov., female paratype (MZSP 74633) genital area and pectines A genital operculum and pectinal basal piece B closeup of the pectinal basal piece, showing cuticular pores on glandular region C right pectine D peg sensillae, distribution E closeup of a peg sensilla. Scale bars: 800 µm (A); 60 µm (B); 1000 µm (C); 20 µm (D); 3 µm (E).
Figure 10 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 10 Tityus (Tityus) spelaeus sp. nov., female holotype (MZSP 74633), chela A external view B dorsal view C ventral view. Scale bar: 3 mm.
Figure 8 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 8 Tityus (Tityus) spelaeus sp. nov., female holotype (MZSP 74633), carapace, dorsal view A white light B UV light. Scale bars: 2 mm.
Figure 1 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 1 Phylogeny of Tityus representatives from South America obtained by analysis of DNA sequences (12S rDNA, 16S rDNA, 28S rDNA, and Cytochrome c Oxidase I- COI). Maximum likelihood tree (Log-likelihood= -12896.086), showing species-groups and subgenera. Values on nodes correspond to ultrafast-bootstrap (Ubst) values.
Figure 13 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 13 Tityus (Tityus) spelaeus sp. nov., female paratypes under laboratory conditions A, B female paratype with scorpionlings A feeding upon scorpionlings B litter on female's back C specimens feeding on a cricket.
Figure 5 from: Moreno-González JA, Pinto-da-Rocha R, Gallão JE (2021) Bringing order to a complex system: phenotypic and genotypic evidence contribute to the taxonomy of Tityus (Scorpiones, Buthidae) and support the description of a new species. ZooKeys 1075: 33-75. https://doi.org/10.3897/zookeys.1075.67459
Figure 5 Tityus C. L. Koch, 1836, female pectinal basal piece and basal middle lamellae of the pectines, showing glandular regions A, C, E White light B, D, F UV light A, BTityus (Tityus) brazilae Lourenço & Eickstedt, 1984 (MZSP 75619) C, DTityus (Archaeotityus) clathratus C. L. Koch, 1844 (MZSP 31468) E, FTityus (Atreus) forcipula (Gervais, 1843) (MZSP). Abbreviations: BML, basal middle lamellae; GR, glandular region. Scale bars: 500 μm.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.