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2,785 results for “genotyping”
HUMAN ENDOMETRIAL SIDE POPULATION CELLS EXHIBIT GENOTYPIC, PHENOTYPIC AND FUNCTIONAL FEATURES OF SOMATIC STEM CELLS
GEO Series GSE21633. Homo sapiens. 16 samples. Type: Expression profiling by array.
VLA lyssavirus genotyping dataset
GEO Series GSE14705. Lyssavirus rabies; Lyssavirus lagos; European bat lyssavirus 1; Lyssavirus australis; Lyssavirus duvenhage; European bat lyssavirus 2; Viruses; Lyssavirus mokola; unidentified. 14 samples. Type: Other.
eQTL Analysis Identifies Novel Associations Between Genotype and Gene Expression in the Human Intestine (Expression)
GEO Series GSE40292. Homo sapiens. 199 samples. Type: Expression profiling by array.
Expression data from Sheep kidney fat (KF) in lambs at 12 weeks of age; comparison of two genotypes, Callipyge (NCpat (CN)) and wild type (NN)
GEO Series GSE58148. Ovis aries; Bos taurus. 8 samples. Type: Expression profiling by array.
Expanded MLST genotyping and comparative genomic hybridization of Campylobacter coli isolates from multiple hosts
GEO Series GSE16787. Campylobacter coli. 132 samples. Type: Genome variation profiling by array.
Database: results of the genotyping of the population of recombinant lines TU/MUSICA (TUM) by means of Genotyping by Sequencing
<p>The database contains the files:</p> <p>- imagen with a seed per recombinant line as well as seed of the two parents</p> <p><strong><em> Figure1_TUM RIL population.jpg</em></strong></p> <p>- imagen of image of the resulting genetic map</p> <p><strong><em> Figure 3.pdf</em></strong></p> <p>- file with the GBS results (95678 SNPs)</p> <p><em><strong>all.filter_ordered.vcf</strong></em></p> <p>- file with the SNPs included in the genetic map published (842 loci/ 175 lines)</p> <p><strong><em>GENETIC MAP_TUM.xlsx</em></strong></p> <p>Genotyping was performed according to Garcia Fernández et al (2021)</p> <p><strong>Reference</strong>: García-Fernández, C., Campa, A. & Ferreira, J.J. Dissecting the genetic control of seed coat color in a RIL population of common bean (<em>Phaseolus vulgaris</em> L.). <em>Theor Appl Genet</em> <strong>134, </strong>3687–3698 (2021). https://doi.org/10.1007/s00122-021-03922-y</p>
Cutroses_genotypes_Wamhoff_et_al_ActaHort_2022
<p>List of 96 cut roses and selected 12 genotypes from garden rose panel (Schulz et al. 2016). </p>
Table 1 in Gene identification using RNA-seq in two sweetpotato genotypes and the use of mining to analyze carotenoid biosynthesis
<p><b>Table 1</b> Length distribution of the assembled transcripts and unigenes.</p><table><tbody><tr><th>Nucleotides length (bp)</th><th>Transcripts</th><th>Unigenes</th></tr></tbody><tbody><tr><th>200–500 bp</th><td>90,099</td><td>67,643</td></tr><tr><th>500–1000 bp</th><td>38,799</td><td>21,181</td></tr><tr><th>1000–2000 bp</th><td>30,015</td><td>13,149</td></tr><tr><th>>2000 bp</th><td>17,254</td><td>7428</td></tr><tr><th>Total</th><td>176,167</td><td>109,401</td></tr><tr><th>Min length</th><td>201</td><td>201</td></tr><tr><th>Mean length</th><td>847</td><td>694</td></tr><tr><th>Median length</th><td>486</td><td>385</td></tr><tr><th>Max length</th><td>15,618</td><td>15,618</td></tr><tr><th>N50</th><td>1430</td><td>1127</td></tr><tr><th>N90</th><td>333</td><td>277</td></tr><tr><th>Total nucleotides</th><td>149,175,171</td><td>75,954,853</td></tr></tbody></table>
ECOBREED WP5 T5.4 Buckwheat genotyping - CAAS
<p>Genotypic evaluation of the ECOBREED WP5 common buckwheat collection. Data are available in 3 separate sheets: (i) all accessions together; (ii) Chinese collection; (iii) samples from the European collection sent as DNA to CAAS. Supplementary material (tables and figures).</p>
Raw ILLUMINA NGS data from study on Mouse virulence of European type III and type II x III-recombinant natural clones of Toxoplasma gondii is not always linked to the ROP18 and ROP5 genotype
<ul> <li>Whole genome sequences of naturally recombinant European type III and type II x III clones were analyzed</li> <li>While two of the type II x III recombinants showed an intermediate mouse virulence, a type III clone was highly virulent </li> <li>Of the three highly virulent clones, only two showed a virulent <em>ROP18</em>-<em>ROP5</em> allele combination</li> <li>The mouse virulent type III clone without virulent <em>ROP18</em>-<em>ROP5</em> allele combination showed the highest level of ROP5 mRNA expression</li> <li>Two genetically similar clones showed apparent differences in virulence and corresponding IL-12 mRNA expression in infected macrophages </li> </ul>
HLADQA1*05 Genotype and the Efficacy of Treatment With Infliximab in Chinese Population Crohn's Disease
ClinicalTrials.gov study NCT05813860. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Genotype-phenotype Correlation of SLC26A4 in CI Patients With EVA
ClinicalTrials.gov study NCT04934605. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
HIV-1 Non-group M in Cameroon : Study of Genotypic and Phylogenetic Diversity (OBSOCAM)
ClinicalTrials.gov study NCT06913959. IPD Sharing: NO. Countries: 0. Publications: 0.
Efficacy and Safety of Boceprevir in Combination With Peginterferon Alfa-2b Plus Ribavirin in Pediatric Subjects With Chronic Hepatitis C Genotype 1 (P08034)
ClinicalTrials.gov study NCT01590225. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Phenotypic and Genotypic Characterization of Escherichia Coli
ClinicalTrials.gov study NCT06462261. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
Efficacy and Safety of Elbasvir/Grazoprevir in Brazilian Participants With Chronic Hepatitis C Virus (HCV) Genotype 1 Infection With Advanced Fibrosis (F3 and F4)
ClinicalTrials.gov study NCT03143998. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
A Comparative Study of Proton-pump Inhibitor Tests for Chinese Reflux Patients in Relation to the CYP2C19 Genotypes
ClinicalTrials.gov study NCT00681005. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Peginterferon Alfa-2a, Ribavirin, Amantadine/Placebo in Hepatitis C Virus (HCV)-Genotype-1-Infection (PRAMA)
ClinicalTrials.gov study NCT00127777. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Hepatitis B Virus HBeAg-negative Genotype D Patients and Hepatocellular Carcinoma
ClinicalTrials.gov study NCT02025842. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Kinase Genotyping of Gastro Intestinal Stomach Tumors (GISTs) From Patients Enrolled in Pfizer A6181112 Phase IIIb Trial
ClinicalTrials.gov study NCT00640692. IPD Sharing: Not stated. Countries: 0. Publications: 0.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.