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Dataset results
260 results for “Biobanks”
An inducible and reversible embryonic stem cell biobank reveals functional genomic pathways and disease targets [iPCR/BC-PCR]
GEO Series GSE84418. Mus musculus. 30 samples. Type: Other.
Prospective derivation of a 'Living Organoid Biobank' of colorectal cancer patients
GEO Series GSE64392. Homo sapiens. 37 samples. Type: Expression profiling by array.
A biobank of 30 molecularly characterized patient-derived xeongraft models of pediatric brain tumors [Illumina HumanMethylation]
GEO Series GSE99994. Homo sapiens. 82 samples. Type: Methylation profiling by genome tiling array.
NBML_BioBank_AIChallange_20240430_01
<div>Description:</div> <div>The National Brain Mapping Laboratory, in line with its educational and research mission and as</div> <div>a leading center in the development of Iranian Brain Mapping Biobank, is collaborating on the</div> <div>Annual Iranian Artificial Intelligence Award challenge in the following areas:</div> <div>1) Challenge Topic Design: To foster a competitive environment in the field of artificial</div> <div>intelligence and promote the use of AI technologies to address pressing healthcare challenges,</div> <div>the National Laboratory of Brain Mapping has selected the topic of "Intelligent Classification of</div> <div>Normal and Abnormal Brain MRIs";</div> <div>2) Challenge Data Provision: The data required for the challenge topic and for use in the annual</div> <div>Iranian Artificial Intelligence Competition will be provided by the Iranian Brain Mapping</div> <div>Biobank.</div> <div>For this challenge, 50 de-identified brain structural MRI images have been provided in two</div> <div>categories: normal (30 samples) and abnormal (20 samples). The abnormal samples represent</div> <div>four disease categories: dementia, multiple sclerosis, neurovascular disease, and tumor.</div> <div> </div> <div>The data have been anonymized and will be provided to participants with binary labels (normal</div> <div>vs. abnormal).</div> <div> </div> <div> Image Characteristics:</div> <div> Brain Structural MRI acquired using a clinical protocol</div> <div> Recorded on a Siemens 1.5 Tesla MRI scanner</div> <div> Sequences included: T1-weighted spin-echo (T1_SE_TRA), T2-weighted turbo spin-</div> <div>echo (T2_TSE_TRA), and T2-weighted inversion recovery dark-fluid</div> <div>(T2_TIRM_TRA_DARK-FLUID)</div> <div> Axial Plane for all three sequences</div> <div> Binary labels (normal vs. abnormal) provided</div> <div> </div> <div> Efforts have been made to separate the data by observing homogeneity across these</div> <div>parameters:</div> <div> Study Description: Brain MRI-C</div> <div> Series Description: t1_se_tra , t2_tse_tra , t2_tirm_tra_dark-fluid</div> <div> Slice_Thickness: 7.5</div> <div> Manufacturer : SIEMENS , Avanto</div> <div> Software_Versions: syngo MR B17</div> <div> Magnetic_Field_Strength: 1.5</div> <div> Flip Angle: 150/90</div> <div> Spacing_Between_Slices: 8.25</div> <div> Acquisition_Matrix: 0\256\155\0 , 0\384\129\0 , 0\256\133\0 , 0\256\167\0 ,</div> <div>0\256\113\0 , 0\256\152\0 , 0\256\161\0 , 0\384\135\0</div>
Determinants of Malignant Hypertension Onset and Related Target Organ Damages: the HAMA Biobank
ClinicalTrials.gov study NCT06629363. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
The Construction of Clinical Database and Multiomics Biobank Based on a Multicentral Prospective Cohort of Benign and Malignant Biliary Tract Diseases
ClinicalTrials.gov study NCT05896956. IPD Sharing: Not stated. Countries: 0. Publications: 0.
The Osteosarcoma Biobank in Peking University People's Hospital
ClinicalTrials.gov study NCT03362086. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
Protective Effect of 5-Alpha Reductase Inhibitors on Atherosclerotic Cardiovascular Disease in Populations With BPH: Evidence From UK Biobank Cohort and Chinese Single Center Database Studies
ClinicalTrials.gov study NCT07196280. IPD Sharing: NO. Countries: 0. Publications: 0.
Establishment of Big Data Platform and Biobank for Colorectal Tubular Adenoma Lesions
ClinicalTrials.gov study NCT06322225. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
Biobank of Samples From Patients With Infectious Diseases
ClinicalTrials.gov study NCT06722131. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Hepatobiliary and Pancreatic Tumor Biobank
ClinicalTrials.gov study NCT07344116. IPD Sharing: NO. Countries: 0. Publications: 0.
The Neurofibromatosis-associated Tumor Biobank
ClinicalTrials.gov study NCT03359304. IPD Sharing: NO. Countries: 0. Publications: 0.
Establishment of a human tongue cancer organoid biobank enables early diagnosis, prognosis, and identification of therapeutic targets
GEO Series GSE145057. Homo sapiens. 25 samples. Type: Expression profiling by high throughput sequencing.
Characterization of a diffuse low and high grade glioma cell line biobank
GEO Series GSE308063. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Norwegian Childhood Cancer Biobank
The childhood cancer biobanking started at Oslo University Hospital in March 2017 and was from 2019 run as a national Norwegian Childhood Cancer Biobank. Informed consent and biological samples are collected regionally and stored centrally. Approximately 12,000 samples from 510 patients and have been included by January 1, 2021, representing a 96% consent and participation rate among our newly diagnosed patients.
NCTN Biobanks
THE NCTN Biobanks receive, store, and distribute biospecimens for the five NCTN Groups as well as the Canadian Cancer Trials Group (CCTG). Collectively, the NCTN Biobanks house solid tumor biospecimens from all organ types, as well as hematological malignancies. Biospecimen types available include, but are not limited to: formalin-fixed, paraffin-embedded (FFPE) tissue; fresh frozen tissue; whole blood, serum, plasma, white blood cells, bone marrow and cells; nucleic acids; urine, stool; and digital Images from H&E or IHC stained slides.
Swedish Childhood Tumor Biobank
The sample collection contains brain tumors and other solid tumors in children as well as blood samples, in some cases cerebrospinal fluid and isolated frozen cells from tumor biopsies. Blood samples from parents are also collected. The histopathological diagnosis of each tumor sample is confirmed by central review by a clinical pathologist. All samples in the Children's Tumor Bank are registered in a LIMS (Laboratory Information Management System), LabWare LIMS SMB, for safe handling of sample data and to ensure traceability.
NOPHO Leukemia Biobank
The biobank collects samples from children with leukaemia in the Nordic region. The sample material consists of cells from bone marrow, blood, serum, cerebrospinal fluid and extracted DNA and RNA. Sample collection began in 1992 with childhood leukaemia biobanking. In the Nordic region, around 300 children a year contract various types of leukaemia. The increase in sampling in 2020 and 2021 relates to follow-up samples.
Cancer Moonshot Biobank
The National Cancer Institute initiated the Cancer Moonshot Biobank to accelerate research through the collection and distribution of biospecimens for key research efforts. The Biobank will engage with over one thousand cancer patients, being treated with standard-of-care therapies, for longitudinal biospecimen and data collection. Cancer patients will be enrolled into the study from a diverse participant population engaged at medical institutions throughout the U.S. The biospecimens will be distributed to qualified scientists to accelerate research progress. The Biobank program, working closely with Leidos Biomedical, Inc. (LBR), will partner with community hospitals and other medical institutions, designated as Biospecimen Source Sites (BSS), to engage and consent eligible participants and collect biospecimens and associated clinical data; work with a central Biospecimen Core Resource (BCR) to support biospecimen collection, processing and storage activities and perform pathology quality control; work with LBR's Molecular Characterization (MoCha) lab to perform clinical tumor molecular characterization assays and return results to patients and their physicians; and make the biospecimens and associated data available to researchers to accelerate cancer research progress. Return of clinical results, a dedicated Patient and Provider Engagement (PPE) website, electronic informed consent, local participant engagement projects, and an embedded ethical, legal and social issues sub-study will together support patient and provider engagement in the program.
Nexus Translational Biobank
Namespace hosted on the Kids First DRC FHIR services at fhir.kidsfirstdrc.org
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.