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779
datasets available to search
ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
O-GlcNAcylation of CTCF regulates 3D chromatin structure [ChIP-seq]
GEO Series GSE255856. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Endometrial Cancer Susceptibility Gene CTCF is Essential for Progesterone Dependent Uterine Maturation
GEO Series GSE227517. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Long non-coding RNA ELDR promotes cell cycle progression in normal oral keratinocytes through induction of a CTCF-FOXM1-AURKA signaling axis
GEO Series GSE198818. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [4C-seq]
GEO Series GSE225257. Homo sapiens; Mus musculus. 248 samples. Type: Other.
Combined CRISPR and proteomics screening reveal a cohesin-CTCF-bound allele contributing to increased expression of RUVBL1 and prostate cancer progression
GEO Series GSE224654. Homo sapiens; Expression vector lentiGuide-Puro. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
CTCF-mediated 3D chromatin predetermines the gene expression program in the male germline
GEO Series GSE244681. Mus musculus. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
CTCF point mutation at R567 disrupts mouse heart development via 3D genome rearrangement and transcription dysregulation [RNA-seq]
GEO Series GSE276744. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
CTCF chromatin residence time controls 3D genome organization, gene expression and DNA methylation in pluripotent cells [Hi-C]
GEO Series GSE153948. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Binding domain mutations provide insight into CTCF's relationship with chromatin and its contribution to gene regulation (chip-seq)
GEO Series GSE270620. Mus musculus. 48 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome wide targeting of the epigenetic regulatory protein CTCF to gene promoters by the transcription factor TFII-I [ChIP-Seq]
GEO Series GSE60917. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
O-GlcNAcylation of CTCF regulates 3D chromatin structure [RNA-seq]
GEO Series GSE255854. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters [MAZ KO]
GEO Series GSE157137. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Chromatin structure and CTCF across the MCF10 breast cancer progression series (HiC)
GEO Series GSE98552. Homo sapiens. 4 samples. Type: Other; Third-party reanalysis.
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286986. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CTCF is dispensable for cell fate conversion but facilitates acute cellular responses [Hi-C]
GEO Series GSE141226. Homo sapiens. 29 samples. Type: Other.
PARP1 Stabilizes CTCF Binding and Chromatin Structure to Maintain Epstein Barr Virus Latency Type
GEO Series GSE115829. human gammaherpesvirus 4. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Germline Variant in *Ctcf* Links Mental Retardation to Wilms Tumor Predisposition
GEO Series GSE193235. Homo sapiens. 3 samples. Type: Genome variation profiling by genome tiling array; Genome variation profiling by SNP array; SNP genotyping by SNP array; Genome variation profiling by high throughput sequencing.
Investigation of 3D Chromatin Architecture Rewiring During Muscle Satellite Cells activation and aging [CTCF ChIP-Seq]
GEO Series GSE223903. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
IGH analysis in pro-B cells with H3K4me3, H3K4me2, H3K9ac, H3K27me3, Pax5 and CTCF [ChIP-Seq]
GEO Series GSE27214. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Auxin-inducible degron 2 system deciphers functions of CTCF domains in transcriptional regulation [SLAM-seq]
GEO Series GSE205184. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.