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531
datasets available to search
ShareScore release 0.9.0
Dataset results
531 results for “Genomic differentiation”
A robust and practical myogenic cell system to explore cellular and genomic features of muscle differentiation [ChIP-Seq]
GEO Series GSE236115. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide profile of RBPJ and differential H3K27ac profile upon treatment with HDAC-inhibitor apicidin.
GEO Series GSE119797. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integrated genome-wide analysis of transcription factor occupancy, RNA polymerase II binding and steady-state RNA levels identify differentially regulated functional gene classes
GEO Series GSE36349. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Identifying the genomic regions where ASCL1 and mSWI/SNF remodelers are both required to regulate chromatin accessibility during neural differentiation [ATAC-seq]
GEO Series GSE214380. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome wide differential H3K4me2 and H3K27me3 profile of spermatozoa from high and sub-fertility buffalo bulls
GEO Series GSE49316. Bos taurus; Bubalus bubalis. 12 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Differential contributions of nuclear lamina association and genome compartmentalization to gene regulation
GEO Series GSE213032. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A systems-level approach to parental genomic imprinting: the imprinted gene network includes extracellular matrix genes and regulates cell cycle exit and differentiation
GEO Series GSE50612. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptome profiles in pluripotent mouse Embryonic Stem Cells and during Retinoic Acid-induced differentiation
GEO Series GSE65697. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
High Throughput Chromosome Conformation Capture identifies differential genome organization in virulent and avirulent strains of Mycobacterium tuberculosis
GEO Series GSE218775. Mycobacterium tuberculosis H37Rv; Mycobacterium tuberculosis H37Ra. 6 samples. Type: Other.
Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line
GEO Series GSE15220. Homo sapiens. 13 samples. Type: Expression profiling by array; Methylation profiling by genome tiling array.
Decoding the 3D genome of macrophage cells during differentiation and Immune activation [HiC]
GEO Series GSE208040. Homo sapiens. 22 samples. Type: Other.
Genome-wide analysis on the human iPS-derived cells during chondrocyte differentiation by the 2C method
GEO Series GSE109172. Homo sapiens. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide quantitative functional enhancer map of mESCs, in the pluripotent state and after induced differentiation
GEO Series GSE171771. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide distribution of AdpA, a global regulator for secondary metabolism and morphological differentiation in Streptomyces [liquid]
GEO Series GSE34036. Streptomyces griseus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome wide DNA accessibility screen by ATAC-Seq in SMARCD2 k/d NB4 cells with/without ATRA differentiation
GEO Series GSE93876. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNAseq analysis of a genome-wide loss-of-function CRISPR/Cas9 library in haploid human embryonic stem cells (hESCs) differentiated into three germ layers
GEO Series GSE143369. Homo sapiens. 18 samples. Type: Other.
Differential prognostic roles of mitochondrial and genomic tRNA-derived fragments in colorectal liver metastases: A retrospective cohort study
GEO Series GSE293849. Homo sapiens. 40 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Differential genome-wide profile of RBPJ, H3K4me1 and H3K4me3 as well as differential chromatin accessibility upon treatment with gamma-secretase inibithor (GSI) DAPT (ATAC-Seq).
GEO Series GSE235977. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Reorganization of nuclear lamina – genome interactions upon differentiation of embryonic stem cells.
GEO Series GSE17051. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Genome-scale DNA methylation maps of pluripotent and differentiated cells
GEO Series GSE11034. Mus musculus. 18 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.