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opennotspecifiedDec 2016View details →

FIGURES 20–21. 20 in Hungarosoma bokori Verhoeff, 1928 (Diplopoda: Chordeumatida): new insights into its taxonomy, systematics, molecular genetics, biogeography and ecology

FIGURES 20–21. 20. Distribution of localities with Hungarosoma spp. along the altitudinal gradient. H. inexpectatum (empty dot) was found in the town of Cluj (Romania, 350 m a.s.l.), other values belong to the localities with records of H. bokori (solid dots). 21. Seasonality of records of Hungarosoma spp. (based on original and available published data).

opennotspecifiedDec 2016View details →

FIGURES 6–9. Hungarosoma bokori Verhoeff, 1928 in Hungarosoma bokori Verhoeff, 1928 (Diplopoda: Chordeumatida): new insights into its taxonomy, systematics, molecular genetics, biogeography and ecology

FIGURES 6–9. Hungarosoma bokori Verhoeff, 1928, specimens from the Abaliget Cave, preserved in alcohol (not scaled). 6: Habitus of adult male in lateral view; the cheirites of anterior gonopods are visible. 7: Details of the dorsal part of the male trunk. 8: Ventral side of mid-body segments in detail. 9: Dorsal side of a juvenile of stadium III with the shape of the pleurotergites typical for the genus (all material from the Abaliget Cave, Hungary). Photos: Andrej Mock.

opennotspecifiedDec 2016View details →

FIGURE 17. Hungarosoma bokori Verhoeff, 1928 in Hungarosoma bokori Verhoeff, 1928 (Diplopoda: Chordeumatida): new insights into its taxonomy, systematics, molecular genetics, biogeography and ecology

FIGURE 17. Hungarosoma bokori Verhoeff, 1928, female, vulvae (Driny Cave). Vulvae in posterior-ventral view (o = opercula) Not scaled.

opennotspecifiedJan 2012View details →

Figure 8. Rooted Bayesian trees from molecular analyses, Table 3 in The systematics of the dusky striped squirrel, Funambulus sublineatus (Waterhouse, 1838) (Rodentia: Sciuridae) and its relationships to Layard's squirrel, Funambulus layardi Blyth, 1849

Figure 8. Rooted Bayesian trees from molecular analyses, Table 3 identifies the specimens. Nodal support values in each phylogenetic tree (BI/ML/MP/NJ) are given on branches.

opencc-zeroMar 2024View details →

Supplementary material 5 from: Gaudeul M, Sweeney P, Munzinger J (2024) An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence. PhytoKeys 239: 73-105. https://doi.org/10.3897/phytokeys.239.112563

Molecular phylogeny of Garcinia L. based on a combined ITS and chloroplast DNA (psbM-trnD, trnQ-rps16 and rps16-trnK) dataset and Bayesian inference

FIGURES 20-23 in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURES 20-23. Male genitalia of species and subspecies of Zizina (lateral views). The classification followed the present study. 20, Z. otis indica, Mysore, Karnataka State, India; 21, Z. otis antanossa, Aburi, Ghana; 22, Z. otis labradus, Cairns, Queensland, Australia; 23, Z. oxleyi, Hanmer Springs, North Canterbury, New Zealand. Scale bar: 0.5 mm.

FIGURE 24 in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURE 24. Linearized NJ tree based on Kimura's two-parameter model using ND5 nucleotide sequences from mtDNA. Identical sequences were treated as a single OTU. The molecular clock of 5.56 x 10-9 substitutions per site per year (0.01D=1.8 Myr) was applied for the divergence time estimations. The right hand side indicates our classification.

FIGURES 15-19 in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURES 15-19. Male genitalia of Zizina species and subspecies (lateral views). The classification follows the present study. 15, Z. emelina emelina, Ono City, Hyogo Pref., Japan; 16, Z. emelina thibetensis, Leshan City, Sichuan, China; 17, Z. otis otis, Jingxi County, Guangxi, China; 18, Z. otis riukuensis, Okinawa Is., Okinawa Pref., Japan; 19, Z. otis ssp., Sikka, Flores, Indonesia. Scale bar: 0.5 mm.

FIGURE 4 in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURE 4. Phylogeny of species of Zizina. The topology shows the Bayesian tree based on 878 bp of mtDNA using the program MrBayes 3.1.2. Identical sequences were treated as a single OTU. Numbers indicate bootstrap values from NJ (top left) and MP (top right) analyses, and posterior probabilities from Bayesian analysis (bottom). Only bootstrap values>50 % and Bayesian posterior probabilities>90 are shown. Branch lengths represent nucleotide substitutions per site. The classification of Bridges (1988) and the present study are shown on the right.

FIGURES 5-14 in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURES 5-14. Male wings of species and subspecies of Zizina (a: upperside; b: underside). The classification follows the present study (See also Results and Discussion in text). 5, Z. emelina emelina, Ono City, Hyogo Pref., Japan; 6, Z. emelina thibetensis, Zhanhe, Yunnan, China; 7, Z. otis otis, Jingxi County, Guangxi, China; 8, Z. otis otis, Havelock Is., South Andaman Iss., India; 9, Z. otis riukuensis, Daito Is., Okinawa Pref., Japan; 10, Z. otis ssp., Sikka, Flores, Indonesia; 11, Z. otis indica, Mysore, Karnataka state, India; 12, Z. otis antanossa, Aburi, Ghana; 13, Z. otis labradus, Cairns, Australia; 14, Z. oxleyi, North Canterbury, New Zealand. Magnification: 1.8 x.

FIGURE 2. A in Molecular systematics and biogeography of the genus Zizina (Lepidoptera: Lycaenidae)

FIGURE 2. A schematic representation of the amplified region and primers locations in the ND5 region of mtDNA. nt: nucleotides. The sequences of the primers are in the text.

FIGURE 10 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 10. Partial map of South America showing the distribution of Leporinus tigrinus based on material examined in the present study.

FIGURE 9 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 9. (A) Pectoral fin, (B) pelvic fin and (C) caudal fin of Leporinus tigrinus (MZUEL 20673, 112.0 mm SL)

FIGURE 4 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 4. Photographs of living specimens of Leporinus tigrinus from (A) rio Araguaia, Luiz Alves, Goiás (photo by José Birindelli), and (B) rio Xingu, Altamira, Pará (photo by Leandro Sousa).

FIGURE 6 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 6. Cranium bones of Leporinus tigrinus (MZUEL 20673, 112.0 mm SL) in (A) dorsal, (B) lateral and (C) ventral view.

FIGURE 2 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 2. Phylogenetic tree of Leporinus tigrinus and related species generated by Bayesian Inference based on cytochrome oxidase subunit I (COI) sequences. The colors represent the molecular operational taxonomic units found. Vertical bars on the left show the results of delimitation species analyses.

FIGURE 5 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 5. (A) Suspensorium of Leporinus tigrinus (MZUEL 20673, 112.0 mm SL); (B) Premaxilla, maxilla, dentary and anguloarticular; (C) Infraorbital bones.

FIGURE 7 in A systematic assessment of Leporinus tigrinus (Characiformes: Anostomidae) using morphological and molecular data

FIGURE 7. (A) Hyoid arc and (B and C) branchial apparatus of Leporinus tigrinus (MZUEL 20673, 112.0 mm SL)

opencc-by-4.0Nov 2024View details →

Systematic Identification of Needlefish (Belonidae) Species using Molecular Genetic and Morphological Markers in the Mediterranean and Black Seas

In this study, we aimed to clarify the taxonomic status of Belonidae species distributed in the Mediterranean Sea and the Black Sea by conducting detailed genetic and morphological markers. A total of 550 needlefish samples were caught between January 2022 and January 2024.  The data set used in the study contains a total of 171 sequences for the COI gene and 120 sequences for the 12s rRNA gene from different Belonidae species, including data from GenBank. Systematic analysis of needlefish species was investigated by using sequencing of mtDNA COI and 12s rRNA gene regions and morphological characters in the Turkish Marine Waters. A separate analysis of the two mitochondrial genes supported by morphological characters revealed that each species is grouped within itself. The genetic and morphological analyses showed that Belone belone acus and Belone belone euxini which are considered as the subspecies of Belone belone are not subspecies of the genus Belone and should be considered at the species level, Belone belone.  Belone svetovidovi is also considerably different from Belone belone and should be considered as a different species. T. acus imperialis, which is thought to be distributed in the Mediterranean Sea, is not a subspecies of Tylosorus acus and should be revised as Tylosorus imperialis which genetically differs from Tylosorus acus and also other Tylosorus species at the species level.