Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
29,897
datasets available to search
ShareScore release 0.9.0
Dataset results
29,897 results for “activism”
Social Accounting Matrix for Lithuania, 2017 (with disaggregated Rubber and Plastics activity)
<p>The dataset is based on doi: 10.5281/zenodo.5077893 but includes Rubber and plastics activity disaggregated to depict production of plastic bags with more details.</p>
Data for "Diversity of Non-Equilibrium Patterns and Emergence of Activity in Confined Electrohydrodynamically Driven Liquids"
<p>Raw data (microscopy videos and image sequences) and scripts used for the analysis for the publication "Diversity of Non-Equilibrium Patterns and Emergence of Activity in Confined Electrohydrodynamically Driven Liquids", Science Advances 7 (38), eabh1642</p>
Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP datasets
<p>Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP epigenomics datasets, to accompany paper Lynall et al 2021</p> <p>Accompanying code available at https://github.com/maryellenlynall/psychimmgen2021</p> <p>Active regulatory elements annotations are a union of the following IDEAS annotations, representing enhancers and active promoters (see http://bx.psu.edu/~yuzhang/Roadmap_ideas/trackDb_test.txt for IDEAS track hubs): </p> <p>4_Enh<br> 6_EnhG<br> 8_TssAFlnk<br> 10_TssA<br> 14_TssWk<br> 17_EnhGA</p> <p>tissues.txt provides the list of ROADMAP tissues </p> <p>The partitioned_LD_scores folder contains partitioned LD scores in a format suitable for stratified LDSC analysis for European participants</p>
Visualization and perception of data gaps in the context of Citizen Science projects: Gradation of Reporting Activity
<p>Online experiment about the influence of different numbers of levels of representation of reporting activity (total number of reports for all birds in the given time span and region) on proportion of correct responses and subjective evaluation of the task (NASA-TLX). Effects of representation with three (3) levels and effects of representation with five (5) levels are investigated. Two groups of members of ornitho.de were tested: experts - persons with access to database (more than 10 reports per month in average) and novices - persons without access to database (less than 10 reports per month in average). Two different tasks were given. The evaluation of statements on a map and the selection of grid fields that met a given requirement.</p>
Comparable respiratory activity in attached and suspended human fibroblasts
<p>Zdrazilova L, Hansikova H, Gnaiger E (2021) Comparable respiratory activity in attached and suspended human fibroblasts. MitoFit Preprints 2021.7. <a href="http://dx.doi.org/10.26124/mitofit:2021-0007">doi:10.26124/mitofit:2021-0007</a></p> <p>All respirometric data are expressed in SI units and are made available here Open Access.</p>
Gerational issues in linking family farming production, traditional food in diet, physical activity and obesity in Pacific Islands countries and territories: the case of the Melanesian population on Lifou Island
<p>In the Melanesian culture, traditional activities are organized around family farming, although the lifestyle transition taking place over the last several decades has led to imbalances in diet and physical activity, with both leading to obesity. The aim of this interdisciplinary study was to understand the links between family farming (produced, exchanged, sold, and consumed food), diet (focused on produced, hunted, and caught food), physical activity (sedentary, light, and moderate-to-vigorous physical activity) and obesity in Melanesian Lifou Island families (parents and children). Forty families, including 142 adults and children, completed individual food frequency questionnaires, wore tri-axial accelerometers for seven continuous days, and had weight and height measured with a bio-impedance device. Qualitative and quantitative interviews were conducted at the household level concerning family farming practices and sociodemographic variables. Multinomial regression analyses and logistic regression models were used to analyze the data. Results showed that family farming production brings a modest contribution to diet and active lifestyles for the family farmers of Lifou Island. The drivers for obesity in these tribal communities were linked to diet in the adults, whereas parental socioeconomic status and moderate-to-vigorous physical activity were the main factors associated to overweight and obesity in children. These differences in lifestyle behaviors within families suggest a transition in cultural practices at the intergenerational level. Future directions should consider seasonality and a more in-depth analysis of diet including macro- and micro- nutrients to acquire more accurate information on the intergenerational transition in cultural practices and its consequences on health outcomes in the Pacific region.</p>
COVRIN D0.3.1: Database of COVID-19 research activities
<p>OHEJP project: COVRIN "One Health research integration on SARS-CoV-2 emergence, risk assessment and preparedness".</p> <p>Since the start of the pandemic in early 2020, a huge number of research projects have been initiated on SARS-CoV-2/COVID-19; additionally, many pre-existing networks and infrastructures have turned their attention to the virus, setting up SARS-CoV-2-specific services. To avoid overlaps and ensure optimal use of resources, a scoping review was performed of European Union-supported SARS-CoV-2 research activities that overlap with COVRIN in terms of focus.</p> <p>This database is associated with OHEJP Deliverable report "D0.3.1: Scoping review of European Union-supported COVID-19 research activities" available at https://doi.org/10.5281/zenodo.5537781</p>
Supplementary data to "Changing microbial activities during low salinity acclimation in the brown alga Ectocarpus subulatus"
<p>This data set contains supplementary data related to the paper: “Insights into the potential for mutualistic and harmful host–microbe interactions affecting brown alga freshwater acclimation”: https://onlinelibrary.wiley.com/doi/10.1111/mec.16766</p> <p>Metagenome.zip:<br>This archive contains the reconstructed genomes of the different bacterial bins. The ".gbk" file was used for the reconstruction of metabolic networks. The ".fsa" and ".gff" files were used for "read mapping".</p> <p>Metabolic_networks.zip:<br>This archive contains all bacterial networks in the "padmet" format (see Aite et al. 2018). Furthermore, there is one file containing all gene-reaction associations (for all bins).</p> <p>Expression_data.zip:<br>This file contains algal gene expression data, bacterial gene expression data (number of reads mapping to each feature in each sample), and, lastly, the summarized bacterial expression per metabolic reaction. </p>
Data Release of Cosmic evolution of the incidence of Active Galactic Nuclei in massive clusters: Simulations versus observations
<p>Dataset of the paper "Cosmic evolution of the incidence of Active Galactic Nuclei in massive clusters: Simulations versus observations".</p> <p> </p> <p>All the necessary code to deal with these data can be found in: https://github.com/IvanMuro/agn_frac_data_release</p>
Data for: "Carbon dioxide reduction by lanthanide(III) complexes supported by redox-active Schiff base ligands"
<p>RAW DATA FOR ARTICLE</p> <p>DATE: NOVEMBER 2022</p> <p>TITLE: Carbon dioxide reduction by lanthanide(III) complexes supported by redox-active Schiff base ligands</p> <p>AUTHORS: Nadir Jori, Davide Toniolo, Bang C. Huynh, Rosario Scopelliti, and Marinella Mazzanti*</p> <p>JOURNAL: Inorganic Chemistry Frontiers (RSC) 2020</p> <p>DOI: <a href="https://doi.org/10.1039/D0QI00801J">10.1039/D0QI00801J</a> </p> <p> </p>
Chromatin activity identifies differential gene regulation across human ancestries
<p>This repository contains data related to:</p> <p>Chromatin activity identifies differential gene regulation across human ancestries</p> <p>Kade P. Pettie, Maxwell Mumbach, Amanda J. Lea, Julien Ayroles, Howard Y. Chang, Maya Kasowski, Hunter B. Fraser</p> <p> </p>
Multi-temporal digital terrain models of the active deep-seated Vögelsberg landslide (OAL-Austria)
<p>Multi-temporal digital terrain models of the active deep-seated Vögelsberg landslide in OAL Austria (Lat: 47.272°, Lon: 11.597°) with a spatial resolution of 50cm. Raster were derived from classified 3D point clouds acquired with a Riegl VUX-1LR unmanned aerial vehicle laser scanner on August 3<sup>rd</sup> 2018, August 14<sup>th</sup> 2019 and November 6<sup>th</sup> 2020 (Projection: EPSG 31254). Ground classification after Axelsson (2000). Data was used to assess topographic changes at the toe of the active deep-seated Vögelsberg landslide in OAL-Austria.</p>
Availability of information on citizen science activities, checked against the Activities & Dimensions Grid of Citizen Science on the basis of some projects
<p>The research resulting in this report aimed at answering the following questions:</p> <ul> <li> <p>Which information on citizen science activities is online available that matches the Activity & Dimension Grid of Citizen Science or goes beyond it? </p> </li> <li> <p>Is there any contradictory information?</p> </li> <li> <p>What can be the reason for the availability or non-availability of information about citizen science activities?</p> </li> <li> <p>How does/could this impact on the CS Track’s recommendations?</p> </li> </ul> <p>The corresponding dataset consists of the results of a keyword-based search in the WP2 project database. The information retrieval resulted in 3318 projects on which information is available in German or English.</p> <p>More information on this research can be found in D2.2 section 3.2.</p>
Peripheral MC1R activation modulates immune responses and confers neuroprotection in a mouse model of Parkinson's disease
<p>Raw data sets for the manuscripts</p> <p>This work was supported by NIH grants R01NS102735 and R01NS110879, the Farmer Family Foundation Initiative for Parkinson’s Disease Research and the MJFF and ASAP [ASAP-000312].</p>
NO2 levels inside vehicle cabins with pollen and activated carbon filters: A real world targeted intervention to estimate NO2 exposure reduction potential
<p>In-vehicle and on-road (ambient) NO<sub>2</sub> measurements in different car cabin from Birmingham, UK. This dataset was used for the publication NO2 levels inside vehicle cabins with pollen and activated carbon filters: A real world targeted intervention to estimate NO<sub>2</sub> exposure reduction potential, Science of The total environment,160395 <a href="https://doi.org/10.1016/j.scitotenv.2022.160395">https://doi.org/10.1016/j.scitotenv.2022.160395</a></p>
HIdden fishing activity hotspots in the Adriatic Sea in 2019
<p>The animated image shows the unreported fishing activity hotspots in the Adriatic in 2019. The datasets report the fishing activity ban areas in the Adriatic over the months and the reported, unreported, total, unreported/total fishing hour distributions across the months estimated by our workflow for vessel data processing (Coro et al., 2023).</p>
Soil extracellular enzyme activity increases during the transition from conventional to organic farming
<p>Dataset of manuscript entitled “Soil extracellular enzyme activity increases during the transition from conventional to organic farming”. This manuscript includes the results of WP1 from the SOFT project (ref. 890874).</p>
Optimising multispectral active fluorescence to distinguish the photosynthetic variability of cyanobacteria and algae
<p>Dataset underlying the following paper:</p> <p>Courtecuisse, E.; Marchetti, E.; Oxborough, K.; Hunter, P.D.; Spyrakos, E.; Tilstone, G.H.; Simis, S.G.H. Optimising Multispectral <br> Active Fluorescence to Distinguish the Photosynthetic Variability of Cyanobacteria and Algae. Sensors 2023, 23</p> <p>This study assesses the ability of a new active fluorometer, the LabSTAF, to diagnostically assess the physiology of freshwater cyanobacteria in a reservoir exhibiting annual blooms. Specifically, we analyse the correlation of relative cyanobacteria abundance with photosynthetic parameters derived from fluorescence light curves (FLCs) obtained using several combinations of excitation wavebands, photosystem II (PSII) excitation spectra and the emission ratio of 730 over 685 nm (Fo(730/685)) using obtained with excitation protocols with varying degrees of sensitivity to cyanobacteria and algae. FLCs captured obtained with blue excitation (B) and green–orange–red (GOR) excitation wavebands capture physiology parameters of algae and cyanobacteria, respectively. The green–orange (GO) protocol, expected to have the best diagnostic properties for cyanobacteria, did not guarantee PSII saturation. PSII excitation spectra showed distinct response from cyanobacteria and algae, depending on spectral optimisation of the light dose. Fo(730/685), obtained using a combination of GOR excitation wavebands, Fo(GOR, 730/685), showed a significant correlation with the relative abundance of cyanobacteria (linear regression, p-value < 0.01, adjusted R2 = 0.42). We recommend using, in parallel, Fo(GOR, 730/685), PSII excitation spectra (appropriately optimised for cyanobacteria versus algae), and physiological parameters derived from the FLCs obtained with GOR and B protocols to assess the physiology of cyanobacteria and to ultimately predict their growth. Higher intensity LEDs (G and O) should be considered to reach PSII saturation to further increase diagnostic sensitivity to the cyanobacteria component of the community.</p>
Datasets for "Targeted insertion and reporter transgene activity at a gene safe harbor of the human blood fluke, Schistosoma mansoni"
<p>To identify sites that could serve as potential genomic safe harbours (GSHs) for transgene integration, we conducted a genome-wide bioinformatic search based on established, widely accepted criteria, along with newly introduced criteria (below), that would satisfy benign and stable gene expression. </p> <p>At the outset, we identified <strong>euchromatic</strong> regions in all developmental stages of <em>S. mansoni </em>to avoid silencing genes to be integrated upon CRISPR/Cas manipulation. With these criteria, we enriched for regions that were, (i) close to peaks of H3K4me3, a histone modification that is associated with euchromatin and transcription start sites, (ii) regions that did not include H3K27me3, a histone modification that is associated with heterochromatin, (iii) regions of open euchromatin accessible to Tn5 integration, in an Assay of Transposase Accessible Chromatin sequencing (ATAC-seq) providing a positive display of integration events, and (iv) given that HIV-1 integrates preferentially into euchromatin in human cell lines, we used sites of HIV proviral integration known from <em>S. mansoni</em> to likewise support predictions of euchromatic regions.</p> <p>Examination of the draft genome of <em>S. mansoni</em> in Worm Base Parasite, version 7 (WormBase Parasite) identified 6,884 regions with enrichment of H3K4me3 in the absence of H3K27me3 in available developmental stages (H3K4me3 not K3K27me3). In mature, adult schistosomes, we found consistently 10,533 ATAC positive regions. There were 4,027 ATAC regions that overlapped with H3K4me3 but not K3K27me3, and 2,915 genes overlapped with (ATAC and H3K4me3 not H3K27me3). Forty-two unambiguous HIV integration sites were identified, and eight genes were ≤ 11 kb upstream or downstream from these integration sites. Repeats were masked with RepeatMasker V4.1.0 using a specific repeat library produced with RepeatModeler2 V2.0.1 and stored as a GFF file.</p> <p>To identify intergenic GSH, we located 10,149 intergenic regions. There were 9,985 regions beyond 2 kb upstream and 8,837 regions outside long non-coding-RNA (lncRNA), which were intersected to 95,587 unique intergenic regions outside 2 kb and lncRNA of ≥100 bp. Two hundred regions were identified intersecting with merged ATAC H3K4me3 signal. Four of these were situated ≤ 11 kb distance from HIV integration sites. </p> <p>Made at George Washington University, Justus Liebig University Giessen, Khon Kaen University, Naresuan University, Aberystwyth University, Schistosomiasis Resource Center, IHPE. </p>
Supplemental data for "Computational screening of chemically active metal center in coordinated dipyridyl tetrazine network"
<p>Atomic coordinates of structures used in N. Ud Din, D. Le, T. S. Rahman "Computational screening of chemically active metal center in coordinated dipyridyl tetrazine network", J. Phys.: Condens. Matter .(2023). DOI: 10.1088/1361-648X/acb8f3</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.