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Figure 3 in Setogenesis and characterization of the new moult substages in the freshwater shrimp Palaemon argentinus (Nobili, 1901) (Caridea: Palaemonidae)
Figure 3. Uropod microphotography of Palaemon argentinus. Early post-moult (A). Abbreviation: vesicular inclusions (v.i).
Physical characterization of agricultural plastic mulching films
<p>The excel file regards the radiometric properties of the source material mulching films. The radiometric tests were carried out at the University of Bari. The mulching films were used for the generation of microplastic test materials. The Italian mulching films were buried at the experimental field at the University of Bari.</p>
Figure 5 in Characterization of the first mitochondrial genome of Aclerdidae (Hemiptera: Coccoidea) with a novel gene arrangement
Figure 5. Sternorrhyncha phylogenetic tree inferred from mitochondrial genome matrix. The phylogenetic tree were reconstruct using Bayesian inference method. Numbers at the nodes indicate Bayesian posterior probabilities.
Figure 4 in Characterization of the first mitochondrial genome of Aclerdidae (Hemiptera: Coccoidea) with a novel gene arrangement
Figure 4. Comparison of the mitochondrial gene arrangement among Nipponaclerda biwakoensis, ancestral insect, other representative species of Psyllidae, Aphididae and Aleyrodidae and four public Coccocidea species.
Figure 2 in Characterization of the first mitochondrial genome of Aclerdidae (Hemiptera: Coccoidea) with a novel gene arrangement
Figure 2. The codon number and relative synonymous codon usage (RSCU) in the Nipponaclerda biwakoensis mitochondrial genome.
Figure 1 in Characterization of the first mitochondrial genome of Aclerdidae (Hemiptera: Coccoidea) with a novel gene arrangement
Figure 1. Gene map of the Nipponaclerda biwakoensis mitochondrial genome. Arrows indicate the orientation of gene transcription. The inner circles show G+C content.
Figure 3 in Characterization of the first mitochondrial genome of Aclerdidae (Hemiptera: Coccoidea) with a novel gene arrangement
Figure 3. Predicted secondary structures of the 17 detected tRNA genes of Nipponaclerda biwakoensis mitochondrial genome. Watson–Crick pairs is indicated by lines, wobble GU pairs is indicated by dots and other noncanonical pairs is indicated by circles.
Figures 13-18. Chrysodeixis chalcites Esper 13. Forewing, 14. Hindwing, 15 in Status of Chrysodeixis chalcites Esper and Chrysodeixis eriosoma (Doubleday) of family Noctuidae (Lepidoptera) in India as determined by DNA barcoding and morphological characterization
Figures 13-18. Chrysodeixis chalcites Esper 13. Forewing, 14. Hindwing, 15. Eight photos of forewing spots; Chrysodeixis acuta (Walker) – 16. Forewing, 17. Hindwing, 18. Eight photos of forewing spots.
Figures 7-12. Chrysodeixis chalcites Esper 7 in Status of Chrysodeixis chalcites Esper and Chrysodeixis eriosoma (Doubleday) of family Noctuidae (Lepidoptera) in India as determined by DNA barcoding and morphological characterization
Figures 7-12. Chrysodeixis chalcites Esper 7. Habitus photograph of male, 8. Habitus photograph of female, 9. Male genitalia attached with aedeagus, 10. Male genitalia, 11. Female genitalia, 12. Aedeagus.
Figures 1-6 in Status of Chrysodeixis chalcites Esper and Chrysodeixis eriosoma (Doubleday) of family Noctuidae (Lepidoptera) in India as determined by DNA barcoding and morphological characterization
Figures 1-6. Chrysodeixis acuta (Walker) 1. Habitus photograph of male, 2. Habitus photograph of female, 3. Male genitalia attached with aedeagus, 4. Male genitalia, 5. Female genitalia, 6. Aedeagus.
Fig. 3 in Detection and molecular characterization of the mosquito-borne filarial nematode Setaria tundra in Danish roe deer (Capreolus capreolus)
Fig. 3. Neighbor-Joining phylogenetic relationship of four isolates of Setaria tundra from distant localities in Denmark. The analysis was based on cox1 gene sequences (578 bp). Percentage bootstrap support from 1000 replicate samples is indicated at the right of the supported node. Accession numbers for sequences obtained from GenBank are given in parentheses, followed by origin of isolate, only applicable to S. tundra. The scale bar indicates distance.
Fig. 1 in Detection and molecular characterization of the mosquito-borne filarial nematode Setaria tundra in Danish roe deer (Capreolus capreolus)
Fig. 1. Geographical origin (black dots) of Setaria tundra recovered from six infected roe deer. A: October 2010, B: May 2011, C: December 2012, D: May 2013 (two cases), and E: March 2014.
Fig. 2 in Detection and molecular characterization of the mosquito-borne filarial nematode Setaria tundra in Danish roe deer (Capreolus capreolus)
Fig. 2. Morphology of adult worms of Setaria tundra (A‾C) and microfilaria (D and E) recovered from roe deer in Denmark. A: Cephalic region showing the bifid projections (bp) carried on top of a peribuccal crown (pc) and one of the four cephalic papillae (cp). B: Posterior end of male worm with papillae weakly visible (arrowheads). C: Posterior end of female worm showing a knob at the tip of the tail (arrow head), that possesses longitudinal grooves and pores, a papilla (pa), and a collar composed of a row of bosses (co). D: Microfilaria collected from a female worm. The length of the microfilaria including the sheath (white arrow heads) was approximately 316 Mm, whereas the microfilaria was approximately 287 Mm, with a blunt anterior end and a tapering posterior end. E: Setaria tundra coiled under the liver capsule (case 3). Scale bars indicated for all but figure E.
Fig. 2. A in Molecular Characterization of Two Myxosporean Species, Henneguya namae Haldar et al. 1983 and Myxobolus sophorae Jayasri, 1982 (Myxosporea: Myxobolidae)
Fig. 2. A schematic drawing of Henneguya namae and Myxobolus sophorae myxospores found infect Chanda nama and Puntius sophore. In frontal view: A – H. namae, C – M. sophorae. In sutural view: B – H. namae, D – M. sophorae. Scale bars (A–D) 10 µm.
Fig. 5 in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 5. Phylogeny based on the 18S rRNA gene and the ITS1-5.8S-ITS2 region of 80 litostomatean taxa and two armophoreans serving as outgroup (CON-lit alignment). Posterior probabilities for the Bayesian inference and bootstrap values for maximum likelihood were mapped onto the 50%-majority rule Bayesian consensus tree. Note that monophyly of the family Lacrymariidae is moderately to strongly statistically supported. Sequences in bold face were obtained during this study. The scale bar indicates five substitutions per one hundred nucleotide positions. For GenBank accession numbers, see Supplementary Table S3.
Fig. 4 in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 4. Phialina pupula in the scanning electron microscope (SEM). (A) Detail of the anterior body half. The head is localized at the anterior body end and is attached directly to the trunk, as typical of the genus Phialina. The head is covered by very narrowly spaced cilia arranged in helically extending rows. Note that the cortex of the trunk is distinctly furrowed by slightly helically extending ciliary rows. According to protargol preparations, each somatic ciliary row has two to five brush dikinetids at its anterior end (see Fig. 2E). SEM observations show that the anterior basal body of a brush dikinetid bears a minute to short cilium or is unciliated, while the posterior basal body bears an ordinary somatic cilium. Therefore, the brush is very difficult to recognize in the SEM and in vivo. (B) Detail of the anterior end of somatic ciliary rows, showing that the anterior basal body of a brush dikinetid bears a short cilium (arrowheads) or is unciliated. The posterior basal body of a brush dikinetid bears an ordinary somatic cilium. Such an inconspicuous brush is a typical feature of lacrymariids and also of the possibly related chaeneids. (C) Detail of a somatic ciliary row, showing a dikinetid (dividing basal bodies) followed by monokinetids that bear ordinary cilia. As typical for haptorians, the anterior cilium of dividing basal bodies is short and stump-like while the posterior cilium is ordinarily long. AC – anterior stump-like cilium of dividing basal bodies; G – tips of cortical granules; H – head; HC – head cilia; SC – somatic cilia; T – trunk.
Fig. 2. A–F in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 2. A–F. Phialina pupula from life (A‒D, F) and after protargol impregnation (E). (A) Overview of a representative semi-contracted specimen. (B) Details of dumbbell-shaped inclusions from various views. (C) Extrusomes are rod-shaped and about 10 µm long. (D) Surface view showing cortical granulation. (E) Ciliary pattern. (F) Variability of body shape in extended, semi-contracted and contracted cells. CK – circumoral kinety; CV – contractile vacuole; DB – dorsal brush; DI – dumbbell-shaped inclusions; EB – extrusome bundle; EX – extrusomes; G – cortical granules; OB – oral bulge; MA – macronucleus; MI – micronucleus; SK – somatic kineties. Scale bars: 20 μm.
Fig. 1. A–C in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 1. A–C. Schematic diagrams of general body organization of Lacrymaria (A), Phialina (B) and Phialinides (C). Based on Dragesco and Dragesco-Kernéis 1986 (A, B) and Foissner 1988 (C). (A) Lacrymaria is characterized by a long, flexible and highly contractile neck, arising from the trunk and carrying the head. (B) Phialina does not have a distinct neck, and the head is thus attached directly to the trunk. (C) Phialinides differs from Phialina only by having a monokinetidal circle (paratene) between the head kineties and the dorsal brush (arrows). CK – circumoral kinety; CV – contractile vacuole; DB – dorsal brush; EX – extrusomes; H – head; HC – head kineties; MA – macronucleus; MI – micronucleus; N – neck; SK – somatic kineties; T – trunk.
Fig. 3 in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 3. Phialina pupula from life under differential interference contrast (A–G) and bright field (H–M) illumination. (A) Overview of a semi-contracted specimen, showing the general body organization. The head is attached directly to the broadly fusiform trunk. Note that the contractile vacuole is located terminally due to the body contraction. The macronucleus is elliptical and situated slightly below the midbody. (B) Detail of the highly refractive dumbbell-shaped inclusions scattered throughout the cytoplasm. (C) A semi-contracted specimen, showing an accumulation of the dumbbell-shaped inclusions in the anterior body half. (D) Detail of the nuclear apparatus. The macronucleus is elliptical, and the micronucleus is attached to the anterior pole of the macronucleus. (E) A contracted specimen, showing many refractive, dumbbell-shaped inclusions scattered throughout the cytoplasm and an elliptical macronucleus accompanied by a single micronucleus. (F) A strongly squeezed specimen, showing the nuclear apparatus, multiple extrusome bundles and some lipid droplets scattered throughout the cytoplasm. Left inset shows optical section through the cortex (opposed arrowhead), containing inconspicuous elliptical granules. (G) Detail of a cytoplasmic rod-shaped extrusome. (H, J) Fusiform, slightly curved cells with narrowly rounded posterior body end. (I) A cylindrical cell. (K) An extended, fusiform exemplar with tail-like posterior end. (L) A sigmoid cell with narrowly rounded ends. (M) A semi-contracted, pyriform specimen with broadly rounded posterior body end. CV – contractile vacuole; DI – dumbbell-shaped inclusions; EB – extrusome bundles; EX – extrusomes; G – cortical granules; H – head; LD – lipid droplets; MA – macronucleus; MI – micronucleus; OB – oral bulge; T – trunk. Scale bars: 20 μm.
Fig. 6 in Morpho-molecular Characterization of the Litostomatean Predatory Ciliate Phialina pupula (Müller, 1773) Foissner, 1983 (Haptoria, Lacrymariidae)
Fig. 6. Phylogeny based on the 18S rRNA gene of 22 taxa from the family Lacrymariidae (18S-lac1 alignment). Note that the genus Phialina is paraphyletic and contains the polyphyletic genus Lacrymaria. Posterior probabilities for the Bayesian inference and bootstrap values for maximum likelihood were mapped onto the 50%-majority rule ML tree. Sequences in bold were obtained during this study. The scale bar indicates nine substitutions per one thousand nucleotide positions.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.