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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
A Mechanism of Cohesin-Dependent Loop Extrusion Organizes Zygotic Genome Architecture
GEO Series GSE100569. Mus musculus. 144 samples. Type: Other.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_ChIP)
GEO Series GSE133880. Triticum aestivum. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Heterochromatic 3D genome organization is directed by HP1a and H3K9-dependent and independent mechanisms [Hi-C]
GEO Series GSE233384. Drosophila melanogaster. 8 samples. Type: Other.
3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [T8_ATAC]
GEO Series GSE228944. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [ChIP-Seq]
GEO Series GSE269228. Neurospora crassa. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
NFIB Is a Pioneer Factor for DNA Replication by Acting as a Genome Organizer [H3K9me3 CUT&Tag]
GEO Series GSE223440. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Developmental dynamics of sea urchin and sea star cis-regulation and the evolution of echinoderm genome organization
GEO Series GSE186363. Strongylocentrotus purpuratus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Danio rerio)
GEO Series GSE52121. Danio rerio. 12 samples. Type: Genome variation profiling by array.
SMCHD1 controls the structure and accessibility of heterochromatin and functions as an organizer of genome compartments (RNA-Seq)
GEO Series GSE251750. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [DAP-seq]
GEO Series GSE143722. Oryza sativa. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Long-range chromatin contacts reveal a role for the pluripotency and Polycomb networks in genome organization
GEO Series GSE50029. Mus musculus. 201 samples. Type: Other.
3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [CHiP-seq]
GEO Series GSE273973. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nuclear Lamins are Not Required for Genome Organization in Mouse Embryonic Stem Cells
GEO Series GSE62685. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by genome tiling array.
Elementary 3D organization of active and silenced E. coli genome (HiC)
GEO Series GSE272158. Escherichia coli. 2 samples. Type: Other.
High-resolution TADs reveal DNA sequences underlying genome organization in flies
GEO Series GSE97965. Drosophila melanogaster. 11 samples. Type: Other.
A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression
GEO Series GSE153576. Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Canonical Nucleosome Organization at Promoters Forms During Genome Activation
GEO Series GSE51766. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic Analysis of the Xenopus Organizer
GEO Series GSE3368. Xenopus laevis. 20 samples. Type: Expression profiling by array.
A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression [Hi-C]
GEO Series GSE153574. Mus musculus. 4 samples. Type: Other.
A chromosomal loop anchor mediates bacterial genome organization
GEO Series GSE144475. Bacillus subtilis. 30 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.