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306 results for “mechanical modeling”

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geo20/100

A human-specific regulatory mechanism revealed in a preimplantation model 

GEO Series GSE262191. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo20/100

Integration of human stem cell-derived in vitro systems and mouse preclinical models identifies complex pathophysiologic mechanisms in retinal dystrophy

GEO Series GSE220627. Homo sapiens; Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo20/100

Modeling Hepatoblastoma: Identification of Distinct Tumor Cell Populations and Key Genetic Mechanisms through Single Cell Sequencing (bulk)

GEO Series GSE180664. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo20/100

Model steatogenic compounds (amiodarone, valproic acid, and tetracycline) alter lipid metabolism by different mechanisms in mouse liver slices [Steatogenic compounds exposures]

GEO Series GSE51543. Mus musculus. 23 samples. Type: Expression profiling by array.

openGEO-OpenDec 2013View details →
geo20/100

Analyze the mechanism of polyploidization of proximal tubular cells (PTC) in the unilateral ischemia reperfusion injury model of acute kidney injury (AKI) in mice

GEO Series GSE212273. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo20/100

Interpreting regulatory mechanisms of Hippo signaling through a deep learning sequence model

GEO Series GSE252463. Mus musculus. 59 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo20/100

Elucidation of the mechanism of treatment by TGFβ inhibitors for the IC/PBS mouse model using hydrogen peroxide

GEO Series GSE226802. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo20/100

A scalable organoid model of autosomal dominant polycystic kidney disease for disease mechanism and drug discovery

GEO Series GSE164564. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo20/100

Divergent Mechanisms of Tissue Remodeling In Acute and Chronic Models of Allergic Airway Inflammation

GEO Series GSE288092. Mus musculus. 25 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →
geo20/100

Changes in gene expression profile caused by mechanical stress in the ligamentum flavum -long term rabbit model-

GEO Series GSE205215. Oryctolagus cuniculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2023View details →
geo20/100

Wilson disease: intersecting DNA methylation and histone acetylation mechanisms affect gene expression regulation in a mouse model of hepatic copper accumulation

GEO Series GSE168972. Mus musculus. 100 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo20/100

elucidation a possible mechanism of kidney stone formation by using a MetS mouse model and to assess the effectiveness of adiponectin treatment in preventing kidney stones.

GEO Series GSE37173. Mus musculus. 5 samples. Type: Expression profiling by array.

openGEO-OpenMar 2013View details →
geo20/100

Adaptive mechanisms in the Mdr2-knockout mouse HCC model

GEO Series GSE4612. Mus musculus. 12 samples. Type: Expression profiling by array.

openGEO-OpenApr 2006View details →
geo20/100

Wilson disease: intersecting DNA methylation and histone acetylation mechanisms affect gene expression regulation in a mouse model of hepatic copper accumulation [ChIP-Seq]

GEO Series GSE168971. Mus musculus. 70 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo20/100

Elucidation of the Mechanisms by which the Progesterone Receptor Inhibits Inflammatory Responses in Cellular Models of Breast Cancer

GEO Series GSE24468. Homo sapiens. 20 samples. Type: Expression profiling by array.

openGEO-OpenOct 2010View details →
geo20/100

Human neurovascular unit chip with a functional blood-brain barrier models brain-infection mechanism of a fungal meningitis pathogen

GEO Series GSE171937. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2021View details →
geo20/100

Molecular mechanisms of cannabinoid type II receptor agonists in a mouse model of psychological stress-induced cardiac injury revealed by whole transcriptomic analysis

GEO Series GSE210820. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
zenodo20/100

A mechanism-based model for the impact response of quartz

<p>Data for&nbsp;the article &quot;A mechanism-based model for the impact response of quartz&quot;.</p>

opencc-by-4.0Jan 2020View details →
zenodo20/100

Data from the thesis: Reduced-order models to predict mesoscale mechanical behavior of polycrystalline materials

<p>This record contains the data and code from the thesis: Reduced-order models to predict mesoscale mechanical behavior of polycrystalline materials. The contents of the chapter-wise zip files are described in the respective markdown files with the suffix <strong><em>_readme.md</em></strong>.</p> <p>&nbsp;</p> <p>A record containing only the code from the thesis is availabe at: <a href="https://doi.org/10.5281/zenodo.10983507" target="_blank" rel="noopener">10.5281/zenodo.10983507</a>.</p>

restrictedcc-by-4.0Apr 2024View details →
zenodo20/100

WCCM 2024: Mechanical modeling of cardiac fibrosis with explicit spatial representation of myocyte loss and collagen alignment

<p>Recording of 5 minutes talk for World Congress of Computational Mechanics 2024 talk.</p>

openJul 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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