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Figure 5 in The first catenicellid (Bryozoa, Ascophora) from Mediterranean shallow waters: a hidden resident or a new immigrant?
Figure 5. Catenicella paradoxa sp. nov. The "articulated basal complex". (A) Basal portion of the paratype specimen (PMC B 17b 5 July 2006) in Figure 2(A) showing a proximally located bifurcating bizooidal segment. Scale bar 200 µm. (B) Close-up of the "articulated basal complex" showing the relationships with the thick underlying wrinkled chitinous tube. Scale bar 200 µm. (C) A further paratype (PMC B 17b 5 July 2006) with a proximally located unizooidal segment apparently directly emerging from the Flabellia petiolata thallus surface, but note the possible presence of a diagonal basal tube under the detrital and organic cover. Scale bar 200 µm. (D, E) Dorsal and frontal side of the basal portion of the holotype specimen (PMC B 17a 5 July 2006) in Figure 2(B). Note the proximally placed fertile bizooidal segment and short rhizooids emanating from the dorsal proximal surface of the first zooid and attaching to the Jania rubens with their branching ends. Scale bars 200 µm. (F) Close-up of (E) showing the "articulated basal complex", partly concealed by detrital matter. Scale bar 100 µm. (G) Close-up of (D) showing the "articulated basal complex" not adhering to the substratum. Scale bar 100 µm.
Figure 1 in The first catenicellid (Bryozoa, Ascophora) from Mediterranean shallow waters: a hidden resident or a new immigrant?
Figure 1. Distribution of living and fossil Catenicella species in the European, Mediterranean and neighbouring areas. Catenicella paradoxa sp. nov. from Recent, asterisk; C. contei from Recent, composite rhombus; C. elegans from Eocene, thinly outlined circles; C. elegans from Miocene, intermediately outlined circles; and C. elegans from Pliocene, thickly outlined circles; C. capitiscollis plus C. cipollai and C. zangheri from Pliocene, thickly outlined triangle; Catenicella spp. from Eocene-Oligocene, thinly outlined squares; Catenicella spp. from Miocene, intermediately outlined squares; Catenicella spp. from Plio-Pleistocene, thickly outlined squares.
Resident self-tissue of proinflammatory cytokines rather than their systemic levels correlates with development of myelofibrosis in Gata1low mice
<p><strong>Movie 1</strong>: tridimensional image of GFP localization in the nucleus</p> <p><strong>Movie 2</strong>: tridimensional image of GFP localization in the cytoplasm</p> <p><strong>Movie 3</strong>: tridimensional reconstruction of GFPpositive cells localized around an adipocyte </p>
Resident self-tissue of proinflammatory cytokines rather than their systemic levels correlates with development of myelofibrosis in Gata1low mice
<p><strong>Figure S1. Gating used to identify endothelial cells (ECs), mesenchymal cells (MSCs), osteoblasts (OBCs), megakaryocytes (MKs) and neutrophils (Neu) in the bone marrow from a wild type mouse. </strong>In order to correctly estimate the frequency of all the cell populations, the monocellular cell suspension used for the analyses were prepared by carefully crushing the femurs of the mice (see [34] and [35] for detail).</p> <p><strong> Figure S2. (A) Example of the computer assisted image analysis used to quantify the level of fibrosis in bone marrow sections stained by Reticulin (black fibers) from representative wild-type (WT) and <em>Gata1</em><sup>low</sup> mice.</strong> The ImageJ program-assisted quantification process includes selection of the color channel (black histogram, Hue), determination of the threshold (Saturation histogram) and quantification of the areas which exceed the threshold (in %) (Brightness histogram). <strong>(B) Example of the computer assisted image analysis used to quantify the number of megakaryocytes positive per CXCR1 in in bone marrow sections from wild-type (WT) and <em>Gata1</em><sup>low</sup> mice. </strong>In this case, the conditions to quantify the signal in wild-type and <em>Gata1</em><sup>low</sup> mice were set separately. The ImageJ program-assisted quantification process includes selection of the cell type, determination of the threshold per cell (Saturation histogram) and quantification of the number of cells which exceed the threshold (Brightness histogram). Magnification 40x.</p> <p><strong>Figure S3. Levels of the proinflammatory cytokines </strong><strong>TGF-</strong><strong>β</strong><strong>1 (A), LCN2 (B) and CXCL1 (C) detected in the sera from wild-type, </strong><strong><em>Psel</em></strong><strong><sup>null</sup></strong><strong> and <em>Gata1</em><sup>low</sup><em>Psel</em><sup>null</sup> mice (all in the CD1 background).</strong> The levels of TGF-β1 in <em>Gata1</em><sup>low</sup> mice were previously reported [33] and are presented as median values from 20 mice as horizontal green line for comparison. Values are presented divided by gender (M, males; F, females) and age (adult and old). P values were calculated with Turkey’s multiple comparison test and are summarized either on the right or in <strong>Table S1</strong>. The number of mice analyzed in each experimental group is indicated by n.</p> <p><strong> Figure S4.<strong> </strong>Serum levels of pro-inflammatory cytokines (TGF-</strong><strong>β</strong><strong>1, upper panel; LCN2, middle panel; CXCL1, bottom panel) detected in CD1, C57BL/6 and DBA/2 mice</strong>. Gender (M, males; F, females) and age (adult and old) were analyzed as independent variables. The number of mice analyzed in each experimental group is indicated by n. Significant p values calculated with multiple comparison performed separately among groups from each different genotype are indicated in the graph. P values obtained with Turkey’s multiple comparison test among all groups are summarized in supplementary <strong>Tables S2-S4</strong>.</p> <p><strong> Figure S5. Hematoxylin/Eosin (H&E) and reticulin staining and TGF-β1, LCN2 and CXCL1 immunostaining of bone marrow sections from representative wild-type (WT) and <em>Gata1</em><sup>low</sup> littermates showing the fibrosis and increased cytokine bioavailability in the microenvironment of the mutant mice. </strong>Results are representative of those observed in 12-month old mice randomly selected from male and female, at least were analyzed 6 mice each staining. The arrows indicate individual megakaryocytes in wild-type mice and megakaryocyte clusters in <em>Gata1</em><sup>low</sup> mice. Magnification 40x. Similar results were previously published in Dunbar et al, 2021[11].</p> <p><strong>Figure S6</strong><em>. </em><strong>Immunohistochemical staining with (P+S) and without (S) the primary antibodies of consecutive sections from the bone marrow of WT and </strong><em>Gata1</em><sup>low</sup><strong> mice showing the specificity of the staining with the primary antibodies. </strong></p> <p><strong>Figure S7. The bone marrow from <em>Gata1</em><sup>low</sup> mice contain great levels of CXCR1. High levels of CXCR1 and CXCR2 in bone marrow sections from <em>Gata1</em><sup>low</sup> mice. A</strong>) Representative sections from the bone marrow of wild-type and <em>Gata1</em><sup>low</sup> littermates immunostained with antibodies per CXCR1 and CXCR2. Magnification 40x. <strong>B</strong>) Computer assisted quantification of the content of the CXCR1 and CXCR2 in 5 randomly selected areas per femur from three-four mice per experimental group. Statistical analysis was done by t-test and statistically significant p values among groups are indicated within the panels. Similar results were reported in Dunbar et al[11].</p> <p><strong>Figure S8</strong>. <strong>(A) Median optical slice of a confocal stack microscopy obtained with a 63x objective.</strong> The blue arrow indicates a GFP signal present inside nucleus (shown as tridimensional image in movie 1), whereas the red arrow indicates a cell were the GFP signal is localized in the cytoplasm (shown as tridimensional image in movie 2). DAPI and GFP signals are shown separately and combined. <strong>B)</strong> <strong>Hematoxylin-eosin staining (left) and fluorescent microscopy (right) of two representative sections from the bone marrow of one </strong><strong><em>huCD34-GFPH2B</em></strong><strong> mouse. </strong>The GFP staining labels either the nuclear areas of cells with small size (1, 2 and 3) or, very rarely, the cytoplasm of large cells (4), possibly macrophages. Slides were counter stained with DAPI. Magnification 40x.</p>
Dataset: Multi-Stakeholder Validation of Entrustable Professional Activities for a Family Medicine Care of the Elderly Residency Program: A Focus Group Study
<p>ZOOM Meeting transcripts from 5 stakeholder group meetings used in the study. </p>
Leap-frog migration and residents: new migratory habits in Swedish Greylag geese
<p>Knowledge about intraspecific and individual variation in bird migration behavior is important to predict spatiotemporal distribution, patterns of phenology, breeding success and interactions with the surrounding environment (e.g., human livelihoods). Such variation is key to adaptive, evolutionary responses, i.e., how individuals respond spatiotemporally to the environment to maximize fitness. In this study we used GPS location data from one to three full annual cycles from 76 Greylag geese Anser anser to test the hypothesis that geese originating at five latitudinally separated capture sites in Sweden have different migration strategies. We also assessed individual consistency in movement strategy over consecutive annual cycles. We used the scale-independent net squared displacement modelling framework to quantify variables of autumn and spring migration for geese from each capture site: distance, timing, and duration. Our results demonstrate a positive correlation between migration distance and latitudinal origin. Geese from the northernmost site on average migrated farther south and about 15 times as far as the short-moving or resident geese from the two southernmost sites. Movement strategies of individual geese varied considerably both within and among capture sites. Individual consistency in movement strategy from one annual cycle to the consecutive was high in geese from the northern sites moving the farthest, whereas the resident or short-moving geese from the southernmost sites generally showed lower or no individual consistency. These changes have come about during a time span so short (i.e. ca 35 years or 8-10 generations) that it can unlikely be explained by classical Darwinian between-generation adaptation. Consequently, and given that young geese follow their parents during their first migration, we presume an important role of within-family, inter-generation change as a driver behind the large-scale changed migration habits in Swedish Greylag geese.</p>
A stream-to-sea experiment reveals inhibitory effects of freshwater residency on organic-matter decomposition in the sea
<p>One billion tons of carbon are annually transported to the global ocean, and the fate of this carbon hinges not only on marine processing rates, but also on freshwater processing during downstream transport. Using a cotton-strip assay we assessed the decomposition of organic matter in marine and freshwater sites and simulated its downstream transport from freshwater to the sea by translocating cotton strips approximately half-way through the freshwater incubation period. We observed faster decomposition in the sea relative to the stream and interestingly, an inhibitory effect of stream incubation on subsequent decomposition in the sea. Total nitrogen content and ∂<sup>15</sup>N in the cotton strips were both greater in the strips incubated entirely in the sea, suggesting greater microbial activity in the marine habitat. Our results lend needed insights into global carbon cycling, the factors that govern organic-carbon processing, and highlight the importance of connections that exist among some of Earth's major ecosystems.</p>
Data to: Opportunities for the conservation of migratory birds to benefit threatened resident vertebrates in the Neotropics
<p>Neotropical countries receive financing and effort from temperate nations to aid the conservation of migratory species that move between temperate and tropical regions. If allocated strategically, these resources could simultaneously contribute to other conservation initiatives. In this study, we use novel distribution maps to show how those resources could aid planning for the recovery of threatened resident vertebrates.</p> <p>Using eBird-based relative abundance estimates, we first identified areas with high richness of Neotropical migrant landbirds of conservation concern (23 species) during the stationary nonbreeding period. Within these areas, we then identified threatened species richness, projected forest loss, and conducted a prioritization for 1,261 red-listed vertebrates using Terrestrial Area-of-Habitat maps.</p> <p>Richness for migrants <span>was greatest along a corridor from the Yucatan peninsula south to the northern Andes but also included southwest Mexico and Hispaniola. Protected areas account for 22.3% of this region while 20.7% is at risk of forest loss. Within this focal region for migrants, all four vertebrate groups showed hotspots of threatened species richness along the west and east Andean slopes</span>. Taxa-specific hotspots included montane areas of southern Mexico and central Guatemala (amphibians/reptiles) and the entire east slope of the Colombian East Andes (mammals).</p> <p><span>Our prioritization highlighted several areas of importance for conservation due to high threatened species richness and projected forest loss including 1) the Pacific dry forests of southwest Mexico, 2) montane regions of northern Central America, and 3) the west Andean slope of Colombia and Ecuador. At a landscape scale in southern Colombia, we show </span>how conservation efforts for 6 Neotropical migrants could benefit 56 threatened residents that share a similar elevational range.</p> <p><em>Synthesis and applications.</em> Funding and effort for migratory bird conservation also has potential to benefit threatened resident vertebrates in the Neotropics. Our study highlights how novel, high resolution information on species distributions and risk of forest loss can be integrated to identify priority areas for the two groups at regional and landscape scales.The approach and data can be further modified for more specific goals, such as within-country initiatives.</p>
Replication package for: Hours Constraints, Occupational Choice, and Gender: Evidence from Medical Residents
<p>This is the replication package for:</p> <p>Wasserman, Melanie (forthcoming) "Hours Constraints, Occupational Choice, and Gender: Evidence from Medical Residents" Review of Economic Studies</p> <p>It contains:</p> <ul> <li>README file</li> <li>do files to reproduce the main tables and figures</li> <li>data files for all reproducible analyses</li> <li>all reproducible results</li> </ul>
Assessment of compound-specific fatty acid d13C and d2H values to track fish residency and mobility in a small subalpine catchment
<p><span>Methods for identifying origin, movement, and foraging areas of animals are essential for understanding ecosystem connectivity, nutrient flows, and other ecological processes. Telemetric methods can provide detailed spatial coverage but are limited to minimum body size of specimen for tagging. In recent years, stable isotopes have been increasingly used to track animal migration by linking geophysical isotope landscapes called "isoscapes". However, compared to telemetric methods, the spatial resolution of bulk stable isotopes is low.</span></p> <p><span>Here we examined a novel approach by evaluating the use of compound-specific hydrogen and carbon stable isotopes of fatty acids (δ</span><sup><span>2</span></sup><span>H<sub>FA</sub> and </span><span>δ<sup>13</sup></span><span>C<sub>FA</sub>) from liver, muscle, brain, and eye tissues for identifying site-specificity of fish from a sub-alpine river catchment. We analysed 208 fish (European bullhead, rainbow trout, and brown trout) collected in 2016 and 2018 at 15 different sites.</span></p> <p><span>δ<sup>13</sup></span><span>C<sub>FA</sub> values of these fish tissues correlated more amongst each other than those of </span><span><span>δ</span><sup><span>2</span></sup><span>H<sub>FA</sub></span> values. Both </span><span><span>δ</span><sup><span>2</span></sup><span>H<sub>FA</sub></span> and </span><span><span>δ<sup>13</sup></span><span>C<sub>FA</sub></span> values showed tissue-dependent isotopic fractionation, while fish taxa had only small effects. The highest site-specificity was for </span><span>δ<sup>13</sup></span><span>C<sub>DHA</sub> values, while the </span><span>δ<sup>2</sup></span><span>H isotopic difference between LIN and ALA resulted in the highest site-specificity. Using linear discrimination analysis of FA isotope values, over 90 % of fish could be assigned to their location of origin, however, the accuracy dropped to about 56 % when isotope data from 2016 were used to predict the sites for samples collected in 2018, suggesting temporal shifts in site specificity of </span><span><span>δ</span><sup><span>2</span></sup><span>H<sub>FA</sub></span> and </span><span>d</span><span>13</span><span>CFA. However, predictive results were still higher than site specificity compared to bulk tissue isotopes for a single time point. In summary, compound-specific isotope analysis of fatty acids may become a highly effective tool for assessing fine and large-scale movement and foraging areas of animals.</span></p>
Data from: Wolbachia infection alters the relative abundance of resident bacteria in adult Aedes aegypti mosquitoes, but not larvae
Insect-symbiont interactions are known to play key roles in host functions and fitness. The common insect endosymbiont Wolbachia can reduce the ability of several human pathogens, including arboviruses and the malaria parasite, to replicate in insect hosts. Wolbachia does not naturally infect Aedes aegypti, the primary vector of dengue virus, but transinfected Ae. aegypti have anti-dengue virus properties and are currently being trialled as a dengue biocontrol strategy. Here, we assess the impact of Wolbachia infection of Ae. aegypti on the microbiome of wild mosquito populations (adults and larvae) collected from release sites in Cairns, Australia, by profiling 16S rRNA gene using next generation sequencing. Our data indicate that Wolbachia reduces the relative abundance of a large proportion of bacterial taxa in Ae. aegypti adults, that is in accordance with the known pathogen-blocking effects of Wolbachia on a variety of bacteria and viruses. In adults, several of the most abundant bacterial genera were found to undergo significant shifts in relative abundance. However, the genera showing the greatest changes in relative abundance in Wolbachia-infected adults represented a low proportion of the total microbiome. In addition, there was little effect of Wolbachia infection on the relative abundance of bacterial taxa in larvae, or on species diversity (accounting for species richness and evenness together) detected in adults or larvae. These results offer insight into the effects of Wolbachia on the Ae. aegypti microbiome in a native setting, an important consideration for field releases of Wolbachia into the population.
Robust isolation protocol for mouse leukocytes from blood and liver resident cells for immunology research
<p>Isolation of liver and blood for single-cell RNAsequencing from mouse.</p>
Databáze a GIS data - Drobná vrchnostenská sídla a vrchnostenské dvory 13. - 17. století (disertační práce) | Database and GIS data - Lesser manorial residences and manorial farms from the 13th to 17th century (disertation thesis)
<p>Original archaeological data used in the author's disertation thesis (see https://doi.org/10.5281/zenodo.3367296).</p>
Elimination of HSV-2 infected cells is mediated predominantly by paracrine effects of tissue-resident T cell derived cytokines
<p>Movies associated with manuscript entitled "Elimination of HSV-2 infected cells is mediated predominantly by paracrine effects of tissue-resident T cell derived cytokines"</p> <p>available on https://doi.org/10.1101/610634 </p>
A human TH17 population with a tissue-resident signature in healthy and inflamed mucosal tissues
<p>A human TH17 population with a tissue-resident signature in healthy and inflamed mucosal tissues</p> <p>https://github.com/BenaroyaResearch/OralMucosa_Woodward_Davis_and_Prlic_Analysis</p>
Intravital imaging data of resident tissue macrophages in the peritoneum
<p>Imaging data for the manuscript titled 'Cellular morphodynamics as quantifiers for functional states of resident tissue macrophages <em>in vivo</em>', to be submitted to PLOS Computational Biology</p>
Brick-and-mortar retail proactive stance and attractive neighborhoods: The mediating role of residents' well-being perceptions
<p>Video resumen de un artículo presentado en el VI Congreso Latinoamericano de Marketing Social en Brasil</p>
Freeze-tolerance of poleward-spreading mangrove species weakened by soil properties of resident salt marsh competitor
<p class="MsoCommentText"><b>1. Background</b>: Increasing temperatures associated with climate change are shifting plant species to higher latitudes. Soil communities could aid the plants' shift into novel areas by harbouring fewer soil-borne antagonists or more mutualists that influence the fitness and stress tolerance of the shifting species. Alternatively, they could contain novel antagonists or fewer mutualists. Thus, soil communities could positively or negatively affect plant range expansion, particularly if they influence plants' responses to climate, such as freeze tolerance, that feedback to affect expansion.</p> <p class="CxSpFirst"><b>2. Methods: </b>We used the northward range expansion of the black mangrove<i>,</i> <i>Avicennia germinans</i>, into a system dominated by marsh cordgrass, <i>Spartina alterniflora</i><i>, </i>in northern Florida, USA to study how the novel soil environment (i.e., <i>S. alterniflora</i> soil) affects mangrove fitness, susceptibility to cold stress, and the colonization of mutualist fungi. We quantified abundance of root mutualistic fungi in mixed marsh-mangrove habitat and conducted a laboratory experiment to test effects of steam-sterilized and live soils from <i>A. germinans </i>and <i>S. alterniflora</i> on the growth, condition, fungal colonization, and freeze tolerance of <i>A. germinans</i> seedlings.</p> <p class="CxSpMiddle"><b>3. Results and Conclusions:</b> In the field, we found two times higher dark septate endophyte (DSE) colonization of <i>A. germinans</i> roots and three times higher fungal spore density in <i>A. germinans</i> soil compared to <i>S. alterniflora </i>roots and soil. In the laboratory experiment, seedlings in steamed <i>S. alterniflora</i> soil treatments had 50-65% survival after freezing, compared to 0% survival in treatments with live <i>S. alterniflora</i> soil. <i>A. germinans</i> live soil mixed with <i>S. alterniflora</i> steamed soil yielded <i>A. germinans</i> roots with the highest DSE colonization and seedlings with greater shoot biomass and lower root:shoot ratios. <i>S. alterniflora</i> live soil lowered the freeze tolerance of <i>A. germinans</i>, decreased mangrove survival, and depressed DSE colonization.</p> <p class="CxSpMiddle"><b>4. Synthesis:</b> <i>S. alterniflora </i>soil could impede <i>A. germinans</i> establishment in salt marsh communities. As climate warming gradually allows <i>A. germinans</i> to displace <i>S. alterniflora</i>, the rhizosphere could become increasingly hospitable to <i>A. germinans</i>. Our work suggests the soil community associated with resident species mediates climatic stressors to affect expansion success. </p> <p class="CxSpFirst"> </p>
Phosphorus allocation to and resorption from leaves regulate the residence time of phosphorus in aboveground forest biomass on Mount Kinabalu, Borneo
<p>1. The residence time of phosphorus (P) in trees is a consequence of plant adaptation to P deficiency, with longer P residence time on soils with low P availability. P residence time has been studied at the leaf or canopy level but seldom at the whole-tree level. Whereas P residence time at the leaf or canopy level is largely determined by leaf longevity and the resorption of P before leaf abscission, P residence time at the whole-tree level will also be influenced by differences in P allocation to different plant parts because leaves and woody organs have distinct longevities.</p> <p>2. We estimated the residence time of P in aboveground tree biomass (AGB) as the ratio of P mass (i.e. leaves plus wood) to the annual flux of P via litterfall (i.e. fine litter plus coarse woody debris) for seven tropical rain forests with different soil P availabilities on Mount Kinabalu, Borneo. We analysed the effects of P allocation to and resorption from leaves on P residence time along a soil P gradient.</p> <p>3. P residence time (2.7–9.8 years) was approximately one fifth of biomass residence time (AGB/annual litterfall mass; 19.8–48.8 years). This was due to a disproportionately greater relative allocation of P to leaves (P mass in leaves/P mass in AGB; 0.11–0.46), which had a smaller fraction of biomass (leaf biomass/AGB; 0.02–0.05) but a shorter longevity (1.0–1.8 years).</p> <p>4. The relative allocation of P to leaves was often high on low-P soils, and P residence time was expected to be short. By contrast, the resorption rate of P from leaves was also high on low-P soils, which extended P residence time with P deficiency. Consequently, P residence time was nearly constant across the forests.</p> <p>5. The short residence time of P relative to biomass indicates that P residence time depends largely on relative P allocation among plant organs. Similar P residence times among sites were maintained because greater P allocation to leaves on low-P soils was effectively offset by higher P-resorption efficiency.</p>
Data from: Persistence of resident and transplanted genotypes of the undomesticated yeast, Saccharomyces paradoxus in forest soil
One might expect yeasts in soil to be highly dispersed via water or insects, forming ephemeral, genetically heterogeneous populations subject to competition and environmental stochasticity. Here, we report persistence of genotypes of the yeast Saccharomyces paradoxus in space and time. Within 1 km2 in a mixed hardwood forest on scales from centimeters to tens of meters, we detect persistence over 3 years of native genotypes, identified by SNPs genome-wide, of the wild yeast, Saccharomyces paradoxus around Quercus rubra and Q. alba. Yeasts were recovered by enrichment in ethanol-containing medium, which measures only presence or absence, not abundance. Additional transplantation experiments employed strains marked with spontaneous defects in the URA3 gene, which also confer resistance to 5-Fluoroorotic acid (5FOA). Plating soil suspensions from transplant sites on 5FOA medium permitted one-step quantification of yeast colony-forming units, with no interference from other unmarked yeasts or microorganisms. After an initial steep decrease in abundance, the yeast densities fluctuated over time, increasing in association with rainfall and decreasing in association with drought. After 18 months, the transplanted yeasts remain in place on the nine sites. In vitro transplantation experiments into non-sterile soil in petri dishes showed similar patterns of persistence and response to moisture and drought. To determine whether S. cerevisiae, not previously recovered from soils regionally, can persist in our cold-climate sites, we transplanted marked S. cerevisiae alone and in mixture with S. paradoxus in fall, 2017. Five months on, S. cerevisiae persist to the same extent as S. paradoxus.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
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