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1,353 results for “single-cell transcriptomics”

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geo24/100

Single-cell transcriptome analyses reveal disturbed decidual microenvironment in women of advanced maternal age

GEO Series GSE305088. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

A single-cell transcriptome atlas of the ageing Drosophila brain

GEO Series GSE107451. Drosophila melanogaster. 128 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2018View details →
geo24/100

The single-cell transcriptomic atlas iPain identifies senescence of nociceptors as a therapeutical target for chronic pain treatment

GEO Series GSE253345. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2024View details →
geo24/100

Single-cell transcriptomics of dynamic cell behaviors

GEO Series GSE193954. Mus musculus. 131 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

Single-cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting

GEO Series GSE143038. Drosophila melanogaster. 1387 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Single-Cell Transcriptome Analysis of CD34+ Stem Cell-Derived Myeloid Cells Infected With Human Cytomegalovirus

GEO Series GSE124334. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2019View details →
geo24/100

Absolute Scaling of Single-Cell Transcriptomes Reveals Pervasive Hypertranscription in Adult Stem and Progenitor Cells

GEO Series GSE221184. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
geo24/100

Single-cell transcriptomic analysis of decidual immune cell landscape in the occurrence of adverse pregnancy outcomes induced by Toxoplasma gondii infection

GEO Series GSE254302. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo24/100

Single-cell transcriptome profiling implicates the psychological stress-induced disruption of spermatogenesis

GEO Series GSE233950. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo24/100

Kidney single-cell transcriptomes predict spatial corticomedullary gene expression and tissue osmolality gradients

GEO Series GSE145690. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2020View details →
geo24/100

Single-Cell Transcriptomes of the Regenerating Intestine Reveal a Revival Stem Cell [part 1]

GEO Series GSE117783. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2019View details →
geo24/100

Single-cell transcriptomics of human cholesteatoma identifies an activin A-producing osteoclastogenic fibroblast subset inducing bone destruction

GEO Series GSE210261. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo24/100

Single-cell transcriptome of the basal murine carotid artery

GEO Series GSE220779. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

Single-Cell Transcriptomes of the Regenerating Intestine Reveal a Revival Stem Cell

GEO Series GSE123516. Mus musculus. 196 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2019View details →
geo24/100

STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging [CosMx Spatial]

GEO Series GSE290466. Homo sapiens. 92 samples. Type: Other.

openGEO-OpenJun 2025View details →
geo24/100

Time-course single-cell and spatial transcriptomics of reovirus-induced myocarditis in neonatal mice

GEO Series GSE189636. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo24/100

Single-Cell Transcriptome Analysis Identifies Key Components of Tumor Microenvironment for Extranodal Natural Killer/T-cell lymphoma

GEO Series GSE203663. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Single-cell transcriptomic profiling of dermal leukocytes

GEO Series GSE223845. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Transcriptomic Profiling of the Developing Cardiac Conduction System at Single-Cell Resolution

GEO Series GSE132658. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

Single-Cell Transcriptomic Profiling of colonic wounds and intact tissues in Hgfac WT and KO mice

GEO Series GSE235741. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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