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SAR Subsets for Selected Field Sites, 2007-2010
This data set provides Synthetic Aperture Radar (SAR) images for 42 selected sites from various terrestrial ecology and meteorological monitoring networks including FLUXNET, Ameriflux, Long Term Ecological Research (LTER), and the Greenland Climate Network (GC-Net).The data set contains at least one image for all 42 sites, and six sites have multiple images. See Table 1 for the sites and the temporal range of the available images. The scenes are in GeoTIFF format in Universal Transverse Mercator (UTM), WGS-84 projection, and 15-meter resolution.The SAR images are subset scenes of approximately 60 km x 70 km that include an established site in one of the monitoring networks. The spatial resolution of all scenes is 15 meters. These scenes are distributed as geotif files with appropriate projection information defined within the file.The acquisition mode for all data is the Fine Beam Double Polarization or FBD with the HH/HV polarization. The HH and HV channels are distributed as 3 channels to allow for an intuitive image display. The HH band is displayed in the red and blue channels and the HV band is displayed in the green channel. For some images only single polarization is available; these images are distributed as grayscale images.The source of the data is the PALSAR (Phased Array type L-band Synthetic Aperture Radar) sensor flying on the Advanced Land Observing Satellite (ALOS). The PALSAR data are in dual Polarization, HH+HV, mode. Bands HH (red and blue) and Band-HV (green) can be used to visualize land use patterns. The resulting images show vegetation in shades of green and barren land in shades of pink or purple.
FUS modulates the level of ribosomal RNA modifications by regulating a subset of snoRNA expression [HydraPsiSeq]
GEO Series GSE202524. Homo sapiens. 20 samples. Type: Other.
Myeloid cell subsets that express latency-associated peptide promote cancer growth by modulating T cells
GEO Series GSE174077. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Analysis of mouse antigen specific germinal centre B cell subset gene signatures in presence and absence of kidney disease during T dependent immunization
GEO Series GSE237445. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Epigenome analysis of depressed and control subjects. [subset]
GEO Series GSE128235. Homo sapiens. 537 samples. Type: Methylation profiling by array.
RPL22 Expression Identifies a Transcriptional Subset of MLH1 Deficient Endometrial Cancers that Impacts Tumor Infiltrating Lymphocytes [protein]
GEO Series GSE302839. Homo sapiens. 95 samples. Type: Protein profiling by protein array.
In vivo intratumoral Heterogeneity in a dish: Scalable Forebrain Organoid Models of Embryonal Brain Tumors for High-Throughput Personalized Drug Discovery (human organoids+cell lines subset 1)
GEO Series GSE269254. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
A novel, alternatively activated neutrophil subset promotes CNS neuron survival and axon regeneration in vivo
GEO Series GSE144637. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Homeostatic, repertoire and transcriptional relationships between colon T regulatory cell subsets
GEO Series GSE240657. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptome and Chromatin Landscape of iNKT Cells are Shaped by Subset Differentiation and Antigen Exposure [RNA-seq]
GEO Series GSE157225. Mus musculus. 118 samples. Type: Expression profiling by high throughput sequencing.
Unique Properties of a Subset of Human Pluripotent Stem Cells With High Capacity for Self-Renewal [FAST-ATAC]
GEO Series GSE147338. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Histone H3K4 methylation regulation and three-dimensional aggregating distribution of a subset of genomic loci mediated by CHD3 homolog PKL in Arabidopsis
GEO Series GSE254858. Arabidopsis thaliana. 58 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Transcriptional landscape of four exhausted CD8 T cell subsets
GEO Series GSE149876. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq of human CD4+ T cell subsets
GEO Series GSE135390. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing.
Reproducible single cell annotation of programs underlying T cell subsets, activation states, and functions
GEO Series GSE297814. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Transcription factor TCF-1 regulates the functions but not the development of lymphoid tissue inducer subsets in different tissues [RNA-seq]
GEO Series GSE190299. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Gene expression analyses of hematopoietic stem cell (HSC) subsets in wildtype or CD41-KO mice
GEO Series GSE45561. Mus musculus. 17 samples. Type: Expression profiling by array.
EPCR Expression Defines the Most Primitive Subset of Human HSPC and Is Required for Their In Vivo Activity
GEO Series GSE77128. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis revealed that two distinct, unique CD4+ T cell subsets were increased in the small intestinal intraepithelial lymphocytes of aged mice
GEO Series GSE249501. Mus musculus. 6 samples. Type: Expression profiling by array.
Profiling of immune cell subsets and functional characteristics of cervical cancer based on single cell RNA sequencing
GEO Series GSE308792. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.