Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - Slide-Seq
GEO Series GSE260797. Mus musculus. 10 samples. Type: Other.
Single cell chromatin accessibility profiles of the chick embryonic ectoderm
GEO Series GSE271424. Gallus gallus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-sequencing reveals pervasive but highly cell type-specific genetic ancestry effects on the response to viral infection
GEO Series GSE162632. Homo sapiens. 292 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from Purkinje cell (ENCSR068SJG)
GEO Series GSE78322. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals the difference between Schwann cells in dorsal root ganglion and sciatic nerve
GEO Series GSE147615. Rattus norvegicus. 4 samples. Type: Expression profiling by high throughput sequencing.
Colonic single epithelial cell census reveals goblet cell drivers of barrier breakdown in inflammatory bowel disease
GEO Series GSE116222. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic sampling of regenerating mouse muscle tissue
GEO Series GSE159500. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing samples from high-grade serous ovarian cancer (HGSOC)
GEO Series GSE158937. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Benchmarking of viruses detection from single-cell RNA sequencing data
GEO Series GSE149443. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Serum-based culture conditions provoke gene expression variability in mouse embryonic stem cells as revealed by single cell analysis
GEO Series GSE75804. Mus musculus. 96 samples. Type: Expression profiling by high throughput sequencing.
A single-cell plume transcriptome atlas of the cold-seep tubeworm Paraescarpia echinospica [ONT]
GEO Series GSE283331. Paraescarpia echinospica. 1 samples. Type: Expression profiling by high throughput sequencing.
A rice single cell transcriptomic atlas defines the developmental trajectories of rice floret and inflorescence meristems
GEO Series GSE185068. Oryza sativa Japonica Group. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer
GEO Series GSE225857. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Multi-cell type deconvolution using a probabilistic model of single-molecule DNA methylation haplotypes
GEO Series GSE239605. Homo sapiens. 205 samples. Type: Methylation profiling by high throughput sequencing.
Cross-species single-cell transcriptomic analysis reveals divergence of cell composition and functions in mammalian ileum epithelium [scRNA-seq_Pig]
GEO Series GSE196659. Sus scrofa. 1 samples. Type: Expression profiling by high throughput sequencing.
Characterization and bioinformatic filtering of ambient gRNAs in single-cell CRISPR screens using CLEANSER [scRNA-seq]
GEO Series GSE272457. Homo sapiens; Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptome atlas of the human pancreas
GEO Series GSE81076. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic profiling of mouse nucleus accumbens at single-cell resolution
GEO Series GSE232774. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiplex profiling of developmental enhancers with quantitative, single-cell expression reporters [scQer_devCRE_mEBs]
GEO Series GSE217686. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome characterization of embryogenesis at a single cell resolution [C. elegans]
GEO Series GSE83523. Caenorhabditis elegans. 2281 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.