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4,144 results for “ITS barcode”
Figure 2 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 2 MEGA X analysis produced a maximum-likelihood (ML) phylogram of the 76 selected Campiglossa (ingroup) and ten Tephritis (outgroup) DNA barcode sequences using the general time reversible model. The first number on each branch is the bootstrap support from ML analysis (pb); the second number represents posterior probability (pp) from Bayesian inference (BI). Samples in green letters were extracted from BOLD systems (www.boldsystems.org).
Figure 11 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 11 Macro photography setups for multi-day collecting trips. A A simple handmade collapsible macro-photography unit for focus stacking B A setup for photographing live tephritid flies. Please see the Materials and methods for details of the camera setups.
Figure 10 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 10 A Holotype male of Campiglossa favillacea Ito, 2011 (new synonym of C. coei, UOPJ) B from left, two paratype females and holotype of C. favillacea [UOPJ] C holotype female of C. roscida Ito, 2011 (new synonym of C. misella) D ditto E holotype or paratype male wing of C. pishanicaF holotype male wing of C. propriaE, F reproduced from Wang (1998) with permission from Xing-Jian Wang.
Figure 1 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 1 The genus Campiglossa portion of the neighbor-joining tree based on the Kimura 2-parameter distances of 7,223 tephritid DNA barcode sequences mostly extracted from BOLD Systems (www.boldsystems.org, as of Jan 2019), including 55 newly obtained Campiglossa sequences (names prefixed with Z). All 211 Campiglossa, Homoeotricha, and Dioxyna (regarded to be the genus Campiglossa, sensu lato, in this study) sequences were recovered as a monophyletic clade in this analysis. Putative species group names (in red) are marked on the respective branches.
Figure 9 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 9 Male genitalia of Campiglossa melaenaA epandrial complex, lateral view B epandrial complex, caudal view C glans and preglans of distiphallus.
Figure 4 from: Miller LA, Benefield TD, Lounsbury SA, Lohrmann V, Blaschke JD (2019) DNA barcoding of rhopalosomatid larvae reveals a new host record and genetic evidence of a second species of Rhopalosoma Cresson (Hymenoptera, Rhopalosomatidae) in America north of Mexico. Journal of Hymenoptera Research 74: 35-46. https://doi.org/10.3897/jhr.74.38276
Figure 4 Neighbor Joining phylogeny of Rhopalosoma with Olixon sp. as the outgroup. Consensus support shown for important nodes. Cricket photos by Carl Strang (Hapithus agitator), and Wil Hershberger/Lang Elliott (H. saltator and Anaxipha exigua s.g.).
Figure 3 from: Miller LA, Benefield TD, Lounsbury SA, Lohrmann V, Blaschke JD (2019) DNA barcoding of rhopalosomatid larvae reveals a new host record and genetic evidence of a second species of Rhopalosoma Cresson (Hymenoptera, Rhopalosomatidae) in America north of Mexico. Journal of Hymenoptera Research 74: 35-46. https://doi.org/10.3897/jhr.74.38276
Figure 3 Maximum Likelihood phylogeny of Rhopalosoma with Olixon sp. as the outgroup. Bootstrap support shown for important nodes. Cricket photos by Carl Strang (Hapithus agitator), and Wil Hershberger/Lang Elliott (H. saltator and Anaxipha exigua s.g.).
Figure 1 from: Miller LA, Benefield TD, Lounsbury SA, Lohrmann V, Blaschke JD (2019) DNA barcoding of rhopalosomatid larvae reveals a new host record and genetic evidence of a second species of Rhopalosoma Cresson (Hymenoptera, Rhopalosomatidae) in America north of Mexico. Journal of Hymenoptera Research 74: 35-46. https://doi.org/10.3897/jhr.74.38276
Figure 1 Adult female Rhopalosoma cf. nearcticum attracted to a mercury-vapor lamp in Fairfax County, VA, USA on July 29, 2018. Photo by Ashley Bradford, initially posted on bugguide.net.
Figure 2 from: Miller LA, Benefield TD, Lounsbury SA, Lohrmann V, Blaschke JD (2019) DNA barcoding of rhopalosomatid larvae reveals a new host record and genetic evidence of a second species of Rhopalosoma Cresson (Hymenoptera, Rhopalosomatidae) in America north of Mexico. Journal of Hymenoptera Research 74: 35-46. https://doi.org/10.3897/jhr.74.38276
Figure 2 Life stages and representative specimens of RhopalosomaA 5th instar larva prior to burrowing (MK991305) B pupal case extracted from soil (MK991302) C adult after failing to emerge properly from cocoon (MK991303) D disarticulated mandible from pupal case (MK991302) E pupal case extracted from dirt showing still living pre-pupa (MK991301) F pupal case awaiting adult emergence (MK991300) G–I early instar larvae attached to: GHapithus agitator adult (larva: MK991304) and HH. saltator nymph (larva: MK991307) IAnaxipha exigua species group (inset: detached larva: MK991302).
FIGURE 1 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode
FIGURE 1. Jangamgul cave in Korea: a, Entrance zone; b, Blind end of the cave; c, Collecting site.
Supplementary material 2 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
: Data type: molecular data
Supplementary material 3 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
: Data type: molecular data
Supplementary material 1 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
: Data type: molecular data
Supplementary material 4 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
: Data type: molecular data
Figures 70-75 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 70-75 Male genitalia features of Hoploscopa. 70Hoploscopa nauticorum, TL725 ♂ 71Hoploscopa anacantha sp. nov., holotype, TL759 ♂ 72Hoploscopa kelama sp. nov., paratype, TL511 ♂ 73Hoploscopa ignitamaculae sp. nov., paratype, TL545 ♂ 74Hoploscopa albomaculata sp. nov., paratype, TL363 ♂ 75Hoploscopa sumatrensis sp. nov., paratype, TL538 ♂.
Figures 64-69 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 64-69 male genitalia features of Hoploscopa. 64Hoploscopa subvariegata, TL534 ♂ 65Hoploscopa persimilis, lectotype, Pyralidae Brit. Mus. Slide N° BMNH20255 ♂ (no juxta drawing) 66Hoploscopa diffusa, holotype, Pyralidae Brit. Mus. Slide N° BMNH1014 ♂ 67Hoploscopa triangulifera, TL711 ♂ 68Hoploscopa astrapias, TL724 ♂ 69Hoploscopa anamesa, TL727 ♂.
Figures 58-63 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 58-63 Male genitalia features of Hoploscopa. 58Hoploscopa titika sp. nov., holotype, TL505 ♂ (apical part of juxta attached to phallus) 59Hoploscopa pangrangoensis sp. nov., paratype, TL659 ♂ 60Hoploscopa isarogensis sp. nov., paratype, TL762 ♂ 61Hoploscopa ypsilon sp. nov., paratype, TL624 ♂ 62Hoploscopa danaoensis sp. nov., holotype, TL632 ♂ 63Hoploscopa quadripuncta, holotype, Pyralidae Brit. Mus. Slide N° BMNH20257 ♂.
Figures 52-57 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 52-57 Male genitalia features of Hoploscopa. 52Hoploscopa luteomacula Nuss, holotype, GU prep. Nuss 744 ♂ 53Hoploscopa obliqua, holotype, Pyralidae Brit. Mus. Slide N° BMNH20252 ♂ (phallus with juxta attached) 54Hoploscopa gombongi sp. nov., holotype, TL653 ♂ 55Hoploscopa tonsepi sp. nov., paratype, TL661 ♂ 56Hoploscopa niveofascia sp. nov., holotype, TL442 ♂ 57Hoploscopa marijoweissae sp. nov., holotype, TL710 ♂.
Figures 46-51 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 46-51 Male genitalia features of Hoploscopa. For each figure left above: genitalia without phallus; left below: phallus; right above: gnathos drawing; right below: juxta drawing. 46Hoploscopa albipuncta sp. nov., paratype, TL336 ♂ (genitalia without phallus), TL635 ♂ (phallus) 47Hoploscopa matheae sp. nov., paratype, TL730 ♂ 48Hoploscopa sepanggi sp. nov., paratype, TL641 ♂ 49Hoploscopa cynodonta sp. nov., paratype, TL531 ♂ 50Hoploscopa parvimacula sp. nov., holotype, TL510 ♂ 51Hoploscopa kinabaluensis sp. nov., paratype, TL342 ♂. Abbreviations: c (cornutus), de (ductus ejaculatorius), g (gnathos), jx (juxta), s (saccus), ta (tegumen arm), v (valva), vc (vinculum), uc (uncus).
Figures 34-45 from: Léger T, Kehlmaier C, Vairappan CS, Nuss M (2020) Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. ZooKeys 907: 1-99. https://doi.org/10.3897/zookeys.907.36563
Figures 34-45 Forewing of Hoploscopa species. 34Hoploscopa ignitamaculae sp. nov., paratype, ♂, North Sulawesi, Danau Mooat, east of Kotamobagu, 1000 m, 30–31.iii.2000 (A. Kallies & C. Zorn) (genitalia on slide TL509 ♂) 35Hoploscopa albomaculata sp. nov., paratype, ♀, Indonesia, North Sulawesi, Danau Mooat, east of Kotamobagu, 1000 m, 25–26.iii. 2000, (A. Kallies & C. Zorn) (genitalia on slide TL540 ♀) 36Hoploscopa sumatrensis sp. nov., holotype, ♂, Indonesia, Sumatra-Holzweg, 25 km SSW-Pematangsiantar, road to Prapat, 6–26.i.1996 (A. Kallies) (genitalia on slide TL755 ♂) 37Hoploscopa mallyi sp. nov., paratype, ♂, Malaysia, Sabah, Mt Kinabalu, Mesilau, 2000 m, 14–17.xi.2006 (W. Mey & K. Ebert) 38Hoploscopa gracilis sp. nov., holotype, ♂, Indonesia, Sumatra-Holzweg, 25 km SSW-Pematangsiantar, road to Prapat, 13.ii.1996 (A. Kallies) (genitalia on slide TL754 ♂) 39Hoploscopa agtuuganonensis sp. nov., holotype, ♀, Philippines, Mindanao, Mt Agtuuganon, 1050 m, 28.v–7.vi.1996 (W. Mey) (genitalia on slide TL616 ♀) 40Hoploscopa boleta sp. nov., paratype, ♀, Papua New Guinea, Morobe, Mt Kaindi, 2360 m, 3.x.1992 (V. O. Becker) (genitalia on slide TL448 ♀) 41Hoploscopa pseudometacrossa sp. nov., holotype, ♀, Papua New Guinea, W. Hhl, Prv, near Mt. Hagen, Kuk Ag, Res. Sta., 1600 m, 19–20.viii.1983 (Scott E. & Pamela Miller) (genitalia on slide TL689 ♀) 42Hoploscopa metacrossa Hampson, ♀, Papua New Guinea, Morobe Province, near Bulolo, Mt Susu National Reserve, Araucaria forest, 975 m, 27–28.viii.1983 (S. Miller). 43Hoploscopa jubata sp. nov., paratype, ♂, Papua New Guinea, Morobe Province, near Bulolo, Mt Susu National Reserve, Araucaria forest, 975 m, 27–28.viii.1983 (S. Miller) 44Hoploscopa jubata sp. nov. , paratype, ♀, Morobe Province, near Bulolo, Mt Susu National Reserve, Araucaria forest, 975 m, 27–28.viii.1983 (S. Miller) 45 Hindwing scent organ in Hoploscopa metacrossa. Paratype, ♂, Papua New Guinea, Morobe Province, Wau, 1200 m, 8–14.xii.1976 (G. F. Hevel & R. E. Dietz) (genitalia on slide TL443 ♂).
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
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