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3,878 results for “Molecular Data”
Figure 2 from: Chao C-T, Huang B-H, Chang J-T, Liao P-C (2020) Taxonomic notes on Scutellaria taipeiensis (Lamiaceae) from morphological and molecular data. PhytoKeys 140: 33-45. https://doi.org/10.3897/phytokeys.140.48578
Figure 2 Flower morphology of S. barbata (A, C)(Chao 4762) and S. taipeiensis (B, D)(Chao 4838). A, B lateral view C, D front view.
Figure 1 from: Chao C-T, Huang B-H, Chang J-T, Liao P-C (2020) Taxonomic notes on Scutellaria taipeiensis (Lamiaceae) from morphological and molecular data. PhytoKeys 140: 33-45. https://doi.org/10.3897/phytokeys.140.48578
Figure 1 Leaf variation of S. barbata (A–D) and S. taipeiensis (E, F). A New Taipei City, Gueishan rd. (Chao 4768) B Taipei City, Hsichou street (Chao 4762) C Ilan County, Ilan City (Chao 4787) D Ilan County, Sanhsing Township (Chao 4789) E Taipei City, campus of NCCU (Chao 4837) F Taipei City, Maukong (type locality, Chao 4838).
Raw data related to: Molecular Mechanisms Controlling Foxp3 Expression in Health and Autoimmunity: From Epigenetic to Post-translational Regulation.
<p><strong>Abstract</strong></p> <p>The discovery of the transcription factor Forkhead box-p3 (Foxp3) has shed fundamental insights into the understanding of the molecular determinants leading to generation and maintenance of T regulatory (Treg) cells, a cell population with a key immunoregulatory role. Work over the past few years has shown that fine-tuned transcriptional and epigenetic events are required to ensure stable expression of Foxp3 in Treg cells. The equilibrium between phenotypic plasticity and stability of Treg cells is controlled at the molecular level by networks of transcription factors that bind regulatory sequences, such as enhancers and promoters, to regulate Foxp3 expression. Recent reports have suggested that specific modifications of DNA and histones are required for the establishment of the chromatin structure in conventional CD4+ T (Tconv) cells for their future differentiation into the Treg cell lineage. In this review, we discuss the molecular events that control Foxp3 gene expression and address the associated alterations observed in human diseases. Also, we explore how Foxp3 influences the gene expression programs in Treg cells and how unique properties of Treg cell subsets are defined by other transcription factors.</p> <p> </p> <p><strong>Progetto giovani ricercatori</strong>[GR-2016-02363725] dal titolo: "Immune Tolerance, Metabolism and Multiple Sclerosis: Novel Molecular Tools to Monitor Disease Pathogenesis and Progression"</p> <p> </p> <p> </p> <p> </p>
Figure 3 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 3 Calanopia media female from the Red Sea A mandible B maxillule C maxilla D maxilliped. Scale bars in mm.
Figure 6 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 6 SEM micrograph of Calanopia media male from the Red Sea A rostrum, ventral view B prosomal end with abdomen, ventral view (medial notch indicated by arrow) C enlarged segments XX–XXIII D male leg 5, posterior view.
Figure 7 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 7 Neighbor Joining phylogenetic tree based on the mtCOI genes of Calanopia elliptica, C. media, C. minor and C. thompsoni from the Red Sea (indicated by *). Calanopia thompsoni sequences (indicated by +) from GenBank were used for comparative analysis.
Figure 5 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 5 Calanopia media male from the Red Sea A habitus, dorsal view B rostrum, lateral view C enlarged rostral filaments (rudimentary rostral notch indicated by arrow) D abdomen, ventral view (knob indicated by arrow) E right antennule F enlarged segments XVIII–XXIII G leg 5, posterior view. Scale bars in mm.
Figure 1 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 1 Calanopia media female from the Red Sea A habitus, dorsal view B habitus, lateral view C rostrum, lateral view (rudimentary rostral notch indicated by arrow) D abdomen, ventral view E abdomen, dorsal view F–G antennule H antenna. Scale bars in mm.
Figure 4 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 4 Calanopia media female from the Red Sea A leg 1, anterior view B leg 2, anterior view C leg 3, anterior view D leg 4, posterior view E leg 5, posterior view. Scale bars in mm.
Figure 2 from: El-Sherbiny MM, Al-Harbi MA (2020) New morphological and molecular data on the little-known pontellid Calanopia media Gurney, 1927 (Crustacea, Copepoda, Calanoida) from the Red Sea, with notes on its diel vertical distribution. ZooKeys 922: 13-33. https://doi.org/10.3897/zookeys.922.46977
Figure 2 SEM micrographs of Calanopia media female from the Red Sea A rostrum, ventral view B abdomen, dorsal view C abdomen, ventral view D leg 5, posterior view.
Supplementary material 2 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure S1
Supplementary material 1 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Table S1
Figure 5 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure 5 Scanning electron microscopy (SEM) images of Xystretrum solidum (from three specimens collected at Progreso Port, Yucatan, Mexico) A whole adult specimen (ventral view) with scattered rosette papillae on forebody B forebody, showing 6 pairs of robust papillae (white arrowhead) C oral sucker, showing 13 pairs of papillae: 5 on interior margin surrounding mouth (yellow arrowhead); one posterolateral to interior margin (dark blue arrowhead); three anterolateral to interior margin (light blue arrowhead); 2 on stylet scar (dark green arrowhead); one lateral to stylet scar (light green arrowhead); one on posterior external margin of oral sucker (black arrowhead); one inside of mouth (red arrowhead) (only right hand side papillae are indicated) D genital atrium detail E ventral sucker (side view), showing long papillae on inner margin (white arrowhead) F ventral sucker (ventral view), showing long papillae on inner margin (white arrowhead). Scale bars: 1000 µm (A); 200 µm (B); 500 µm (C, D); 100 µm (E, F). For more details of observed characters by SEM from other localities analyzed in this study, see Suppl. material 2: Figure S1.
Figure 4 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure 4 Line drawings of the 532 CHCM-voucher of Xystretrum solidum from the urinary bladder of Sphoeroides testudineusA whole specimen (ventral view) B details of reproductive organs C details of genital atrium. Scale bars: 1000 µm (A); 250 µm (B–D).
Figure 3 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure 3 Phylogenetic tree obtained using Bayesian inference for the COI dataset. The scale bar represents the number of nucleotide substitutions per site. GenBank accession numbers of the new sequences of Xystretrum solidum are shown in bold. Filled circles above/below branches and at the nodes represent Bayesian Posterior Probability ≥ 0.95.
Figure 2 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure 2 Phylogenetic tree obtained using Bayesian inference for the 28S rRNA dataset. The scale bar represents the number of nucleotide substitutions per site. GenBank accession numbers of the new sequences of Xystretrum solidum are shown in bold. Filled circles above/below branches and at the nodes represent Bayesian Posterior Probability ≥ 0.95.
Figure 1 from: Martínez-Aquino A, García-Teh JG, Ceccarelli FS, Aguilar-Aguilar R, Vidal-Martinez VM, Leopoldina Aguirre-Macedo M (2020) New morphological and molecular data for Xystretrum solidum (Gorgoderidae, Gorgoderinae) from Sphoeroides testudineus (Tetraodontiformes, Tetraodontidae) in Mexican waters. ZooKeys 925: 141-161. https://doi.org/10.3897/zookeys.925.49503
Figure 1 . Northern Yucatan Peninsula, Mexico, showing localities where the specimens of Xystretrum solidum were collected.
Molecular dynamics simulation data of regulatory ACT domain dimer of human phenylalanine hydroxylase (PAH) (with unbound ligand)
<p>Raw data of molecular dynamics simulations of regulatory ACT domain dimer with unbound ligands. Simulation starts from the crystal pose (PDB: 5FII) and is motivated by this paper:</p> <p>Yunhui Ge, Elias Borne, Shannon Stewart, Michael R. Hansen, Emilia C. Arturo, Eileen K. Jaffe and Vincent A. Voelz. <a href="http://www.jbc.org/content/293/51/19532"><em>Simulation of the regulatory ACT domain of human PAH unveil the mechanism of phenylalanine binding.</em></a> J. Biol. Chem., 2018, 293(51), pp 19532-19543</p>
Molecular Evolution of Tuatara Visual System Datasets: Supporting Data for the Tuatara Genome
<p>Datasets associated with the Molecular Evolution of Tuatara Visual System supplement to the paper: The Tuatara Genome: Insights into Vertebrate Evolution from the Sole Survivor of an Ancient Reptilian Order.</p>
Fig. 2 in A new species of Casmaria H. Adams & A. Adams, 1853 (Gastropoda, Cassidae) from the Philippines identified by molecular data
Fig. 2. Casmaria boblehmani sp. nov. A-C. Holotype, 36.3 x 19.5 mm, Danajon Banks, Olango Is, Philippines. D-E. Paratype 2, 35.1 x 21.7 mm, same locality as holotype. F. 27.7 x 18.8 mm, Tip of Cape York, Queensland, Australia. G. 38.6 x 25.4 mm, off Woka Island, Molucca Sea, Indonesia. H-I. ANSP 276463, 41.5 x 24.2 mm, Akuilan Is, Fiji. K-L. ANSP 266122, 36.5 x 24.6 mm, Atiue, Tahiti, Society Islands.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.