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Data from: Cost effectiveness of the New Zealand diabetes in pregnancy guideline screening recommendations
Objective: To compare the cost-effectiveness of 2 possible screening strategies for gestational diabetes mellitus (GDM) from the perspective of the New Zealand health system, developed as part of a gestational diabetes guideline. Design: A decision analytic model was built comparing 2-step screening (glycated haemoglobin (HbA1c) test at first booking and a 2 h 75 g oral glucose tolerance test (OGTT) as a single test at 24–28 weeks) with 3-step screening (HbA1c test at first booking and a 1 h glucose challenge test (GCT) followed by a 2 h 75 g OGTT when indicated from 24–28 weeks) using a 9-month time horizon. Setting: A hypothetical cohort of 62 000 pregnant women in New Zealand. Methods: Probabilities, costs and benefits were derived from the literature, and supplementary data was obtained from National Women's Annual Clinical Reports. Main outcome measures, screening and treatment costs (NZ$2013) and effect on health outcomes (incidence of complications). Results: The total cost for both strategies under baseline assumptions shows that the 2-step screening strategy would cost NZ$1.38 m more than the 3-step screening strategy overall. The additional cost per case detected was NZ$12 460 per case. The model found that the 2-step screening strategy identifies 12 more women with diabetes and 111 more women with GDM when compared against the 3-step screening strategy. We assessed the effect of changing the sensitivity and specificity of the OGTT. The baseline model assumed that the 2 h 75 g OGTT has a sensitivity and specificity of 95%. The 2-step strategy becomes more cost-effective when the diagnostic accuracy measures are improved. Conclusions: Adopting a 2-step strategy would moderately increase the number of GDM cases detected at the same time as moderately increasing the number of women with false negatives at a significant cost to the health system. Further evidence on the benefits of the 2 different approaches would be welcome.
Data from: Two new synonyms in Heteranthera (Pontederiaceae, Commelinales)
Hydrothrix and Scholleropsis, two segregate monospecific genera placed within the Heteranthera s.l. clade, are here transferred to Heteranthera based on phylogenetic and morphological data. A brief discussion on the morphology and affinities of Heteranthera s.l. is given, along with the designation of lectotypes for the two new transfers.
Data from: A new crustacean from the Herefordshire (Silurian) Lagerstätte, UK, and its significance in malacostracan evolution
Cascolus ravitis gen. et sp. nov. is a three-dimensionally preserved fossil crustacean with soft parts from the Herefordshire (Silurian) Lagerstätte, UK. It is characterized by a head with a head shield and five limb pairs, and a thorax (pereon) with nine appendage-bearing segments followed by an apodous abdomen (pleon). All the appendages except the first are biramous and have a gnathobase. The post-mandibular appendages are similar one to another, and bear petal-shaped epipods that probably functioned as a part of the respiratory–circulatory system. Cladistic analysis resolves the new taxon as a stem-group leptostracan (Malacostraca). This well-preserved arthropod provides novel insights into the evolution of appendage morphology, tagmosis and the possible respiratory–circulatory physiology of a basal malacostracan.
Data from: Description of a new species of Hedruris Nitzsch, 1821 (Nematoda, Hedruridae) from freshwater turtles in Argentina, with information on its life cycle and a review of the genus's host and geographic distribution
Hedruris dratini n. sp. (Nematoda, Hedruridae) is described from freshwater turtles in Argentina and information about its life cycle provided. The new species differs from the remaining species of the genus by possessing an excretory pore, and the nerve ring and deirids being positioned at equal distance from the anterior end. Additionally, H. dratini n. sp. has mammilated eggs and males possess nine pairs of caudal papillae. The first life cycle within the genus including an amphipod as intermediate host and a reptile as a definitive host is presented. Furthermore, the host and geographic distribution of species of the genus Hedruris Nitzsch, 1821 are analyzed. Although the genus has a cosmopolitan distribution and parasitizes a great diversity of hosts, the majority of its species follow a Gondwanian distribution and its preferred hosts are amphibians.
Data from: Genetic structure of an introduced paper wasp, Polistes chinensis antennalis (Hymenoptera, Vespidae) in New Zealand
Several eusocial wasps are prominent invaders to remote islands. The paper wasp Polistes chinensis antennalis is native to East Asia, was introduced to New Zealand in 1979, and has expanded its distribution there. This provides an excellent opportunity to examine the impacts of an initial bottleneck and subsequent expansion on genetic structure. We analysed and compared the genetic population structures of the native (Japan and South Korea) and invasive New Zealand populations. Although 94% of individuals had shared haplotypes detected across both populations, the remaining 6% had private haplotypes identified in only one of the three countries. The genetic variation at microsatellite loci was lower in New Zealand than in native countries, and the genetic structure in New Zealand was clearly distinct from that in its native range. Higher frequencies of diploid male and triploid female producing colonies were detected in New Zealand than in the native countries, showing the reduction of genetic variation via a genetic bottleneck. At least two independent introductions were suggested, and the putative source regions for New Zealand were assigned as Kanto (central island) and Kyushu (south island) in Japan. Serial founder events following the initial introduction were also indicated. The estimated dispersal distance between mother and daughter in New Zealand was twice that in Japan. Thus, the introduction history of P. chinensis antennalis in New Zealand is likely the result of at least two independent introductions, passing through a bottleneck during introduction, followed by population expansion from the point of introduction.
Data from: Ancient mitochondrial genomes clarify the evolutionary history of New Zealand's enigmatic acanthisittid wrens
The New Zealand acanthisittid wrens are the sister-taxon to all other "perching birds" (Passeriformes) and – including recently extinct species – represent the most diverse endemic passerine family in New Zealand. Consequently, they are important for understanding both the early evolution of Passeriformes and the New Zealand biota. However, five of the seven species have become extinct since the arrival of humans in New Zealand, complicating evolutionary analyses. The results of morphological analyses have been largely equivocal, and no comprehensive genetic analysis of Acanthisittidae has been undertaken. We present novel mitochondrial genome sequences from four acanthisittid species (three extinct, one extant), allowing us to resolve the phylogeny and revise the taxonomy of acanthisittids. Reanalysis of morphological data in light of our genetic results confirms a close relationship between the extant rifleman (Acanthisitta chloris) and an extinct Miocene wren (Kuiornis indicator), making Kuiornis a useful calibration point for molecular dating of passerines. Our molecular dating analyses reveal that the stout-legged wrens (Pachyplichas) diverged relatively recently from a more gracile (Xenicus-like) ancestor. Further, our results suggest a possible Early Oligocene origin of the basal Lyall's wren (Traversia) lineage, which would imply that Acanthisittidae survived the Oligocene marine inundation of New Zealand and therefore that the inundation was not complete.
Data from: A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis
Background: A novel Gram-negative, non-haemolytic, non-motile, rod-shaped bacterium was discovered in the lungs of a dead parakeet (Melopsittacus undulatus) that was kept in captivity in a petshop in Basel, Switzerland. The organism is described with a chemotaxonomic profile and the nearly complete genome sequence obtained through the assembly of short sequence reads. Results: Genome sequence analysis and characterization of respiratory quinones, fatty acids, polar lipids, and biochemical phenotype is presented here. Comparison of gene sequences revealed that the most similar species is Pelistega europaea, with BLAST identities of only 93% to the 16S rDNA gene, 76% identity to the rpoB gene, and a similar GC content (~43%) as the organism isolated from the parakeet, DSM 24701 (40%). The closest full genome sequences are those of Bordetella spp. and Taylorella spp. High-throughput sequencing reads from the Illumina-Solexa platform were assembled with the Edena de novo assembler to form 195 contigs comprising the ~2 Mb genome. Genome annotation with RAST, construction of phylogenetic trees with the 16S rDNA (rrs) gene sequence and the rpoB gene, and phylogenetic placement using other highly conserved marker genes with ML Tree all suggest that the bacterial species belongs to the Alcaligenaceae family. Analysis of samples from cages with healthy parakeets suggested that the newly discovered bacterial species is not widespread in parakeet living quarters. Conclusions: Classification of this organism in the current taxonomy system requires the formation of a new genus and species. We designate the new genus Basilea and the new species psittacipulmonis. The type strain of Basilea psittacipulmonis is DSM 24701 (= CIP 110308 T, 16S rDNA gene sequence Genbank accession number JX412111 and GI 406042063).
Data from: Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms
Tetraodontiformes (pufferfishes and kin) is a taxonomically and structurally diverse, widely-distributed clade of acanthomorphs, whose members often serve as models for genomics and, increasingly, macroevolutionary studies. Morphologically disparate Palaeogene fossils suggest considerable early experimentation, but these flattened specimens often preserve limited information. We present a three-dimensionally preserved beaked tetraodontiform from the early Eocene (c. 53 Ma) London Clay Formation, UK. Approximately coeval with the oldest crown tetraodontiforms, †Ctenoplectus williamsi gen. et sp. nov. presents an unprecedented combination of characters, pairing a fused beak-like dentition with prominent dorsal-fin spines that insert atop transversely-expanded pterygiophores roofing the skull. Bayesian total-evidence tip-dating analysis indicates that †Ctenoplectus represents the sister lineage of Triodontidae and highlights considerable levels of homoplasy in early tetraodontiform evolution. According to our dataset, rates of morphological character evolution were elevated at the origin of crown Tetraodontiformes, especially within gymnodonts, but declined after the principal body plans were established. Such 'early burst' patterns are regarded as a hallmark of adaptive radiations, but are typically associated with diversification at smaller spatiotemporal scales. However, denser sampling of Neogene and Recent taxa is needed to confirm this pattern.
Data from: Ecological incumbency impedes stochastic community assembly in Holocene foraminifera from the Huon Peninsula, Papua New Guinea
Persistence in the structure of ecological communities can be predicted both by deterministic and by stochastic theory. Evaluating ecological patterns against the neutral theory of biodiversity provides an appropriate methodology for differentiating between these alternatives. We traced the history of benthic foraminiferal communities from the Huon Peninsula, Papua New Guinea. From the well-preserved uplifted reef terrace at Bonah River we reconstructed the benthic foraminiferal communities during a 2200-year period (9000–6800 yr B.P.) of reef building during the Holocene transgressive sea-level rise. We found that the similarity of foraminiferal communities was consistently above 60%, even when comparing communities on either side of a massive volcanic eruption that smothered the existing reef system with ash. Similarly, species diversity and rank dominance were unchanged through time. However, similarity dropped dramatically in the final stages of reef growth, when accommodation space was reduced as sea-level rise slowed. We compared the community inertia index (CII) computed from the observed species abundances with that predicted from neutral theory. Despite the differences in foraminiferal community composition in the younger part of the reef sequence, we found an overall greater degree of community inertia with less variance in observed communities than was predicted from neutral theory, regardless of foraminiferal community size or species migration rate. Thus, persistent species assemblages could not be ascribed to neutral predictions. Ecological incumbency of established foraminiferal species likely prevented stochastic increases in both migrant and rare taxa at the Bonah River site. Regardless of the structuring mechanisms, our reconstruction of Holocene foraminiferal assemblages provides historical context for the management and potential restoration of degraded species assemblages.
Data from: Rapid light-induced shifts in opsin expression: finding new opsins, discerning mechanisms of change, and implications for visual sensitivity
Light induced shifts in cone frequency and opsin expression occur in many aquatic species. Yet little is known about how quickly animals can alter opsin expression and, thereby, track their visual environments. Similarly, little is known about whether adult animals can alter opsin expression or whether shifts in opsin expression are limited to critical developmental windows. We took adult wild caught bluefin killifish (Lucania goodei) from three different lighting environments (spring, swamp, variable), placed them under two different lighting treatments (clear vs. tea-stained water), and monitored opsin expression over four weeks. We measured opsin expression for five previously described opsins (SWS1, SWS2B, SWS2A, RH2-1, LWS) as well as RH2-2 which we discovered via 454 sequencing. We used two different metrics of opsin expression. We measured expression of each opsin relative to a housekeeping gene and the proportional expression of each opsin relative to the total pool of opsins. Population and lighting environment had large effects on opsin expression which were present at the earliest time points indicating rapid shifts in expression. The two measures of expression produced radically different patterns. Proportional measures indicated large effects of light on the SWS1 expression whereas relative measures indicated no such effect. Instead, light had large effects on the relative expression of SWS2B, RH2-2, RH2-1, and LWS. We suggest that proportional measures of opsin expression are best for making inferences about color vision, but that measures relative to a house keeping gene are better for making conclusions about which opsins are differentially regulated.
Data from: Female-biased gape and body-size dimorphism in the New World watersnakes (tribe: Thamnophiini) oppose predictions from Rensch's Rule
Sexual size dimorphism (SSD) is ubiquitous across animals with female bias most prominent in snakes and other ectothermic organisms. To understand how SSD evolves across species, Rensch's Rule predicts that in taxa where males are larger, SSD increases with body size. In contrast, where females are larger, SSD decreases with body size. While this rule holds for many taxa, it may be ambiguous for others, particularly ectothermic vertebrates. Importantly, this rule suggests that the outcomes of SSD over phylogenetic time scales depends on the direction of dimorphism predicated on the difference in reproductive efforts between males and females. Here we examine SSD in the context of Rensch's Rule in Thamnophiini, the garter and waternsakes, a prominent group composing the North American snake biota. Using a dated phylogeny, measurements of gape, body and tail size, we show that these snakes do not follow Rensch's Rule, but rather female-biased SSD increases with body size. We in turn find that this allometry is most pronounced with gape and is correlated with both neonate and litter size, suggesting that acquiring prey of increased size may be directly related to fecundity selection. These changes in SSD are not constrained to any particular clade; we find no evidence of phylogenetic shifts in those traits showing SSD. We suggest several ways forward to better understand the anatomical units of selection for SSD and modularity
Data from: Basilotritus uheni, a new cetacean (Cetacea, Basilosauridae) from the late Middle Eocene of Eastern Europe
A new basal basilosaurid cetacean, Basilotritus uheni n. gen. n. sp., comes from the late middle Eocene (Bartonian) of Ukraine. It is the earliest dated record of a cetacean from Eastern Europe. The tympanic bulla of Basilotritus uheni shares basilosaurid synapomorphies but possesses unusual traits inherited from protocetids. Cetaceans related to Basilotritus uheni and referred to as Eocetus or "Eocetus" have been recorded from Africa, Europe, North America and South America. "Eocetus" wardii from North America is recombined as Basilotritus wardii. Platyosphys paulsonii and Platyosphys einori from Ukraine are considered as nomina dubia; specimens prior referred to as Platyosphys sp. are similar or related to Basilotritus. Other records of the Eocene cetaceans from Ukraine and south Russia are identified as Basilotritus or related genera. Early basilosaurids are demonstrated to be a paraphyletic, morphologically and geographically diverse group of the genera that colonized the world ocean as late as in Bartonian age and were probably the ancestors of Neoceti, as well as of more derived basilosaurids.
Data from: Blood-stage parasitaemia and age determine Plasmodium falciparum and P. vivax gametocytaemia in Papua New Guinea
A better understanding of human-to-mosquito transmission is crucial to control malaria. In order to assess factors associated with gametocyte carriage, 2083 samples were collected in a cross-sectional survey in Papua New Guinea. Plasmodium species were detected by light microscopy and qPCR and gametocytes by detection of pfs25 and pvs25 mRNA transcripts by reverse-transcriptase PCR (qRT-PCR). The parasite prevalence by PCR was 18.5% for Plasmodium falciparum and 13.0% for P. vivax. 52.5% of all infections were submicroscopic. Gametocytes were detected in 60% of P. falciparum-positive and 51% of P. vivax-positive samples. Each 10-fold increase in parasite density led to a 1.8-fold and 3.3-fold increase in the odds of carrying P. falciparum and P. vivax gametocytes. Thus the proportion of gametocyte positive and gametocyte densities was highest in young children carrying high asexual parasite densities and in symptomatic individuals. Dilution series of gametocytes allowed absolute quantification of gametocyte densities by qRT-PCR and showed that pvs25 expression is 10-20 fold lower than pfs25 expression. Between 2006 and 2010 parasite prevalence in the study site has decreased by half. 90% of the remaining infections were asymptomatic and likely constitute an important reservoir of transmission. However, mean gametocyte densities were low (approx. 1-2 gametocyte/μL) and it remains to be determined to what extent low-density gametocyte positive individuals are infective to mosquitos.
Data from: Bioacoustics reveals two new syntopic species of Adenomera Steindachner (Anura: Leptodactylidae: Leptodactylinae) in the Cerrado of central Brazil
In this paper, we describe two syntopic species of Adenomera from the Chapada dos Veadeiros microregion, northern State of Goiás, central Brazil, recognized based on morphology, color patterns, and bioacoustics. Specimens and calls were obtained in the Municipality of Teresina de Goiás, central Brazil. Adenomera cotuba sp. nov. is diagnosed from the other 16 congeneric species by its 1) small size (adult male SVL 18.6–20.5 mm) and very robust body; 2) dorsum glandular/granular with no distinctive dorsal granular rows or dorsolateral folds; 3) black or very dark dorsal coloration with no distinctive color patterns (e.g., dorsolateral or vertebral stripes); 4) toe tips not developed into flattened disks; 5) presence of antebrachial tubercle; and 6) advertisement call consisting of a well-defined series of pulsed calls (7–32 calls/series) with progressive increment in amplitude in the first third of each call series when it reaches a sustained plateau. Adenomera juikitam sp. nov. is diagnosed from the other 16 congeneric species by its 1) dorsum profusely glandular/granular with no distinctive dorsal granular rows or dorsolateral folds; 2) dorsum with a marble-like and red coloration with no distinctive color patterns (e.g., dorsolateral or vertebral stripes); 3) toe tips not developed into flattened disks; 4) small size (adult male SVL 19.1–19.5 mm) and very robust body; and 5) long (148–202 ms) advertisement call composed of 16–21pulses. Both new taxa occur in syntopy, and our data allow us to differentiate them both in temporal (pulses/call) and spectral (frequency peaks) traits of their advertisement calls. Besides, dorsal coloration is distinctive, Adenomera cotuba sp. nov. has a black or very dark-colored dorsum, whereas Adenomera juikitam sp. nov. has a marble-like and red-colored dorsum, in addition to the presence (A. cotuba sp. nov.) or absence (A. juikitam sp. nov.) of antebrachial tubercle.
Data from: Appraisal of the fossil record of Homarus (nephropid lobster), with description of a new species from the upper Oligocene of Hungary and remarks on the status of Hoploparia
The fossil record of the clawed lobster genus, Homarus, is appraised. The taxonomic history of Homarus and Hoploparia is summarized, and a list of species recognized for each is provided. A tabulation of all fossil species of the family Nephropidae permits assessment of nephropid species diversity through time. A new species of Homarus, H. hungaricus, is recorded from the upper Oligocene (Chattian) Mány Formation at Mány, northern Hungary. The species is known by a single specimen consisting of a partial cephalothorax, a pleon minus telson, and partial chelipeds. Homarus is now known by two extant species (H. americanus and H. gammarus) and six fossil taxa, one of Early Cretaceous (Albian; H. benedeni) and five of Cenozoic age (H. hungaricus n. sp., H. klebsi, H. lehmanni, H. morrisi, and H. percyi). The new fossil Homarus differs from modern congeners in aspects of carapace and pleon ornamentation and, especially, cutter claw shape. This is the fourth Oligocene occurrence of a nephropid species; all are Homarus and all are from Western Europe. Homarus makes its appearance in the fossil record in the Early Cretaceous (Albian) and then is not known again until the Paleogene, despite the fact that nephropid lobsters in general are well known from the Late Cretaceous. Nephropid lobsters are better known from the Cretaceous than from the Cenozoic. Both raw species numbers and numbers corrected (normalized) for epicontinental sea coverage show that shelf-dwelling nephropid lobsters were most diverse during the Late Cretaceous.
Data from: Quality of evidence considered by Health Canada in granting full market authorization to new drugs with a conditional approval: a retrospective cohort study
Objectives: This study examines the characteristics of studies that Health Canada uses to grant full marketing authorization for products given a conditional approval between January 1, 1998 and June 30, 2017. Design: Cohort study. Data sources: Journal articles listing drugs that fulfilled their conditions and received full marketing authorization, Notice of Compliance database, Notice of Compliance with conditions web site, Qualifying Notices listing required confirmatory studies, clinicaltrials.gov, PubMed, Embase, companies making products being analyzed, journal articles resulting from confirmatory studies. Interventions: None Primary and secondary outcome measures: Characteristics of studies - study design (randomized controlled trials, observational), primary outcome used (clinical, surrogate), blinding, number of patients in studies, patient median age, number of men and women. Results: Eleven companies confirmed 36 publications for 19 products (21 indications). Twenty-nine out of the 36 studies were randomized controlled trials (RCTs) but only 10 stated if they were blinded. Twenty used surrogate outcomes. The median age of patients was 56 (interquartile range (IQR) 44, 61). The median number of men per study/trial was 184 (IQR 58, 514) versus women - 141 (IQR 46, 263). Conclusions: Postmarket studies required by Health Canada had more rigorous methodology than those required by either the Food and Drug Administration or the European Medicines Agency. There were still deficiencies in these studies. The absence of blinding in the majority of RCTs may introduce bias in their results. The use of surrogate outcomes especially in oncology trials means that improvements in survival are not available. The relatively young age of patients, even for products for cancer, means that predicting how the elderly will respond is often unknown. The almost universal finding that men outnumbered number women may make it hard to differentiate responses by sex. These results raise potential concerns about the quality of evidence that Health Canada accepts.
Data from: Elevational filtering and the evolution of planthoppers (Hemiptera, Fulgoromorpha) in Papua New Guinea
Along elevational gradients, phylogenetic relatedness patterns constitute a considerable source of information, and may shed light on ecological processes that structure communities. This study focuses on community phylogenetic structure of planthoppers, specifically the species-rich and abundant Fulgoromorpha families (Hemiptera, Auchenorrhyncha), Cixiidae and Derbidae+Achilidae, along an elevational gradient on Mount Wilhelm (Papua New Guinea). In order to assess the factors driving planthoppers community composition, we recorded abundance data for planthoppers species at each elevation and we generated a molecular phylogeny of the local species, using Bayesian Inference. We analyzed 168 individuals representing 59 local morphospecies. Using a fully resolved and well-supported phylogeny, we then investigated the phylogenetic structure of the communities by performing a Spatial Analysis of Community Diversity. We show that Cixiidae are phylogenetically clustered along the elevational gradient, whereas Derbidae+Achilidae harbour a random structure, suggesting that local adaptation to elevation shapes community structure of Cixiidae, but not that of Derbidae+Achilidae. Our findings highlight the importance of phylogenies in the study of tropical elevational gradients.
Data from: Two new species of Limbodessus diving beetles from New Guinea - short verbal descriptions flanked by online content (digital photography, μCT scans, drawings and DNA sequence data)
Background: To date only one species of Limbodessus diving beetles has been reported from the Island of New Guinea, L. compactus (Clark, 1862), which is widerspread in the Australian region. New information: We describe two new species of microendemic New Guinea Limbodessus and use a compact descriptive format flanked by enriched online content in wiki powered species pages. Limbodessus baliem sp.n. is described from ca. 1,600 m altitude in the Baliem Valley of Papua and Limbodessus alexanderi sp.n. from >3,000 m altitude north of Sugapa, Papua. Based on our analysis, we also transfer three species from other genera to Limbodessus Guignot, 1939, with the following changes: Limbodessus deflectus (Ordish, 1966), new combination; Limbodessus leveri (J. Balfour-Browne, 1944), new combination; and Limbodessus plicatus (Sharp, 1882), new combination.
Data from: The Tetramerium lineage (Acanthaceae, Justicieae) revisited: phylogenetic relationships reveal polyphyly of many new world genera accompanied by rampant evolution of floral morphology
Molecular data confirm monophyly of the Tetramerium lineage (Acanthaceae, Justicieae), a group of nearly 200 species, ca. 75% from the New World (NW) and the remainder from Asia or Africa. Compared to our earlier work, > 50% more in-group taxa were sampled (nearly 2/3 of known taxa now sampled) and added ~20% more sequence data. We time-calibrate the phylogeny using primary fossil evidence and the larger context of a calibrated phylogeny for Acanthaceae. Many aspects of relationship are strongly supported but uncertainty remains about a number of phylogenetically isolated taxa (e.g., African Angkalanthus, Chorisochora; NW Ancistranthus) and some aspects of relationships among clades remain weakly supported. The group originated in the OW and began diversifying about 11.5 Ma. A single dispersal event to the NW occurred about 8.3 Ma, likely from Africa to southwestern North America. A number of major clades, particularly in the NW, are less than 5 Ma old and species in many clades are substantially younger. Several NW clades – even those with <10 species – comprise species that are markedly heterogeneous in floral traits likely reflecting selection by pollinators. Many NW genera are not monophyletic, which is not surprising given that floral traits have been relied upon taxonomically. Diversification rate analysis revealed no significant shifts resulting in a gradual increase in number of lineages with time. The Tetramerium lineage is now phylogenetically well characterized but remains enigmatic from the perspective of morphological evidence for many aspects of relationships. The lineage is usefully thought of as a 'clade complex': as a species complex is of morphologically confusing species, a 'clade complex' is of clades that are not well characterized morphologically.
Data from: Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set
The Neotropical moth-like butterflies (Hedylidae) are perhaps the most unusual butterfly family. In addition to being species-poor, this family is predominantly nocturnal and has anti-bat ultrasound hearing organs. Evolutionary relationships among the 36 described species are largely unexplored. A 13-gene anchored hybrid enrichment probe set ('BUTTERFLY2.0'), that includes standard markers used in butterfly phylogenetics, captured sequences from decades-old museum specimens, and appears to be a cost-effective technique to infer phylogenetic relationships of the butterfly tree of life. Our dataset comprises up to 10,898 aligned base pairs from each of the 22 species of Hedylidae and 19 outgroups. Eleven of the thirteen loci were captured from 100% of the taxa, and the remaining loci were captured from ≥94% of taxa. The inferred phylogeny had robust support at 80% of nodes. Our results are consistent with morphological work, with Macrosoma tipulata sister to all remaining hedylids, followed by M. semiermis sister to the remaining species in the genus. We tested the hypothesis that nocturnality evolved only once from diurnality in Hedylidae, and showed that the ancestral condition was likely diurnal, with a shift to nocturnality early in the diversification of this family.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.