Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis
GEO Series GSE146974. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Analysis Reveals Dynamic Changes in the Liver Microenvironment During Colorectal Cancer Metastatic Progression
GEO Series GSE284449. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Immunophenotyping of Lyme Erythema Migrans [Single-Cell TCR Repertoire Sequencing]
GEO Series GSE169438. Homo sapiens. 12 samples. Type: Other.
Single cell RNA sequencing analysis of P63+ lung progenitor cells isolated from IPF patients
GEO Series GSE269794. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from Purkinje cell (ENCSR729ENB)
GEO Series GSE78442. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
An automatec microwell platform for large-scale single cell RNA-seq.
GEO Series GSE85575. Homo sapiens; Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
In vivo interaction screening reveals liver-derived constraints to metastasis [Single Cell Multiome ATAC + Gene Expression]
GEO Series GSE267982. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell profiling reveals Colonic CD8 Topography in IBD -hIL26 Mouse RNA-Seq
GEO Series GSE148505. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
SCDC: Deconvolution of Bulk Gene Expression by Single-Cell RNA Sequencing Data
GEO Series GSE136148. Mus musculus; Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Immunophenotyping of Lyme Erythema Migrans [Single-Cell BCR Repertoire Sequencing]
GEO Series GSE169437. Homo sapiens. 12 samples. Type: Other.
Early transcriptional landscapes of Chlamydia trachomatis-infected epithelial cells at single cell resolution
GEO Series GSE132525. Homo sapiens. 264 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic of murine pancreatic tumor model by treatment of PD-L1-directed PlGF/VEGF blockade
GEO Series GSE189753. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptional and epigenetic dynamics during aortic aging in mice
GEO Series GSE164585. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Analysis of the role of microbiota in macrophages using single cell RNA sequencing (scRNA-seq).
GEO Series GSE141561. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Th2 single-cell heterogeneity and clonal interorgan distribution in helminth-infected mice
GEO Series GSE181342. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
M1hot tumour associated macrophages are positively associated with tissue-resident memory T cell responses and survival outcomes in human lung cancer (single cells).
GEO Series GSE116947. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling uncovers cellular complexity and microenvironment in gastric tumorigenesis associated with Helicobacter pylori
GEO Series GSE249874. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell CRISPR Screen for HIV Host Dependency Factors Involved in Latency Reversal
GEO Series GSE247599. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [scRNA-seq]
GEO Series GSE216783. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing unveils dynamic transcriptional profiles during the process of donkey spermatogenesis and maturation
GEO Series GSE282737. Equus asinus. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.