Find research datasets worth reusing

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Nyssa sylvatica (black gum) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Nyssa sylvatica (black gum) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Picea rubens in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Picea rubens measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Pinus strobus (eastern white pine) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Pinus strobus (eastern white pine) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Populus grandidentata in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Populus grandidentata measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Prunus serotina (black cherry) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Prunus serotina (black cherry) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Quercus alba (white oak) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Quercus alba (white oak) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Quercus rubra (northern red oak) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Quercus rubra (northern red oak) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Quercus velutina (black oak) in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Quercus velutina (black oak) measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Tsuga canadensis in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Tsuga canadensis measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of Ulmus in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of Ulmus measurements in centimeter units and were aggregated to a yearly timescale.

Harvard Forest site, station Harvard Forest's Lyford Blocks within the Prospect Hill Tract, study of diameter at breast height of trees in units of centimeter on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Harvard Forest (HFR) contains diameter at breast height of trees measurements in centimeter units and were aggregated to a yearly timescale.

opencc-by-4.0Mar 2020View details →

Targeted indication of imaging for detection of vesicoureteric reflux after pediatric febrile urinary tract infections based on a multiparametric computational tool

This is the original data used for our study on differentiated indication of a voiding cystourethrography after pediatric febrile urinary tract infections.

opencc-by-4.0Mar 2020View details →

Low-dose antibiotic prophylaxis has no significant impact on the stability of the intestinal microbiome in children with urogenital tract malformations under 1 year of age.

Raw data for the evaluation of the stool microbiome in children under antibiotic prophylaxis vs. controls.

PLATE II in Some lesser known silent crickets (Orthoptera: Gryllidae: Euscyrtinae) from the hilly tracts of India

PLATE II. Euscyrtus (E.) concinnus Ƌ (1–5): 1. Habitus; 2. Head, dorsal view; 3. 8th & 9th tergites with nodule-like structures; 4 & 5. View of genitalia: 4. Dorsal [(a)—spinulose lobes]; 5. Ventral [(a)—close-up]; 6. Habitus (♀

PLATE IV. P in Some lesser known silent crickets (Orthoptera: Gryllidae: Euscyrtinae) from the hilly tracts of India

PLATE IV. P. quadripunctatus Ƌ (1–8): 1. Habitus; 2. Head, dorsal view; 3. Pronotum, dorsal view; 4. Pronotum, lateral view; 5. Metanotal gland; 6–8. View of genitalia: 6. Dorsal; 7. Ventral; 8. Lateral; 9. Habitus (♀)

PLATE III. E in Some lesser known silent crickets (Orthoptera: Gryllidae: Euscyrtinae) from the hilly tracts of India

PLATE III. E. ogatai. Ƌ (1–6): 1. Habitus; 2. Head, dorsal view; 3. Metanotal gland; 4–6. View of genitalia: 4. Dorsal; 5. Ven-tral; 6. Lateral; 7. Habitus (♀).

PLATE I in Some lesser known silent crickets (Orthoptera: Gryllidae: Euscyrtinae) from the hilly tracts of India

PLATE I. Euscyrtus (E.) tubus sp. nov. Ƌ Holotype (1–7): 1. Habitus; 2. Head, dorsal view [(a)—antennae close-up]; 3. Tegmi-na, dorsal view; 4–6. View of genitalia: 4. Dorsal [(a)—tube like structure, (b)—spinulose lobes]; 5. Ventral [(a)—guiding rod]; 6. Lateral; 7. Spermatophore; 8. Habitus (Allotype).

opencc-by-4.0Sep 2020View details →

Zheng et al-Insects-Bacterial Composition and Diversity of the Digestive Tract of Odontomachus monticola Forel and Ectomomyrmex javanus Mayr-Supplementary files

Figure S1: Rarefaction curves of bacterial ASVs for all samples Table S1: Diversity indices of bacterial communities between the two ponerine ant species Table S2: Diversity indices of bacterial communities in the infrabuccal pockets and guts of workers and larvae Table S3: ANOSIM analysis of bacterial communities across infrabuccal pockets, guts of workers, and larvae (p-values).

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Data from: Aquatic animals promote antibiotic resistance gene dissemination in water via conjugation: role of different regions within the zebra fish intestinal tract, and impact on fish intestinal microbiota

The aqueous environment is one of many reservoirs of antibiotic resistance genes (ARGs). Fish, as important aquatic animals which possess ideal intestinal niches for bacteria to grow and multiply, may ingest antibiotic resistance bacteria from aqueous environment. The fish gut would be a suitable environment for conjugal gene transfer including those encoding antibiotic resistance. However, little is known in relation to the impact of ingested ARGs or antibiotic resistance bacteria (ARB) on gut microbiota. Here, we applied the cultivation method, qPCR, nuclear molecular genetic marker and 16S rDNA amplicon sequencing technologies to develop a plasmid-mediated ARG transfer model of zebrafish. Furthermore, we aimed to investigate the dissemination of ARGs in microbial communities of zebrafish guts after donors carrying self-transferring plasmids that encode ARGs were introduced in aquaria. On average, 15% of faecal bacteria obtained ARGs through RP4-mediated conjugal transfer. The hindgut was the most important intestinal region supporting ARG dissemination, with concentrations of donor and transconjugant cells almost 25 times higher than those of other intestinal segments. Furthermore, in the hindgut where conjugal transfer occurred most actively, there was remarkable upregulation of the mRNA expression of the RP4 plasmid regulatory genes, trbBp and trfAp. Exogenous bacteria seem to alter bacterial communities by increasing Escherichia and Bacteroides species, while decreasing Aeromonas compared with control groups. We identified the composition of transconjugants and abundance of both cultivable and uncultivable bacteria (the latter accounted for 90.4%–97.2% of total transconjugants). Our study suggests that aquatic animal guts contribute to the spread of ARGs in water environments.

opencc-zeroDec 2016View details →