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382
datasets available to search
ShareScore release 0.9.0
Dataset results
382 results for “chromatin structure”
Individual transcription factors modulate both the micromovement of chromatin and its long-range structure [Hi-C]
GEO Series GSE262602. Mus musculus. 6 samples. Type: Other.
O-GlcNAcylation of CTCF regulates 3D chromatin structure [ATAC-seq]
GEO Series GSE255855. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A phase separation mechanism underlies development of cancer and aberrant organization of three-dimensional chromatin structure
GEO Series GSE144643. Mus musculus; Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
LncRNA LINC00525 suppresses p21 expression via mRNA decay and triplex-mediated changes in chromatin structure in lung adenocarcinoma
GEO Series GSE171460. Homo sapiens. 6 samples. Type: Expression profiling by array.
Chronic loss of STAG2 leads to altered chromatin structure contributing to deregulated transcription in AML
GEO Series GSE111537. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
The Dlk1-Dio3 noncoding RNA cluster coordinately regulates mitochondrial respiration and chromatin structure to establish proper cell state for muscle differentiation [ATAC-Seq]
GEO Series GSE284208. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A phase separation mechanism underscores development of cancer and aberrant organization of three-dimensional chromatin structure [Hi-C]
GEO Series GSE143465. Homo sapiens. 8 samples. Type: Other.
Analysis of chromatin structure of the BCL11A locus in HUDEP-2 cells by Capture-Pore-C (CPC)
GEO Series GSE292694. Homo sapiens. 10 samples. Type: Other.
Exogenous artificial DNA forms chromatin structure with active transcription in yeast
GEO Series GSE183492. Saccharomyces cerevisiae. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development [Micro-C]
GEO Series GSE271758. Mus musculus. 6 samples. Type: Other.
Extended archaeal histone-based chromatin structure regulates global gene expression in Thermococcus kodakarensis
GEO Series GSE151920. Thermococcus kodakarensis. 10 samples. Type: Expression profiling by high throughput sequencing.
Study of three-dimensional structure of chromatin through a 4C-seq experiment in mouse NSC shControl and shJMJD3 upon TGFβ treatment [Aopep]
GEO Series GSE197011. Mus musculus. 6 samples. Type: Other.
Predicting modulaters of TE-driven chromatin 3D structure
GEO Series GSE248863. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing; Other.
Temporal Analyses of Cardiac Chromatin Accessibility, DNA Methylation and Epigenomic Structure Reveal Locus-Specific Regulation [RNA-seq]
GEO Series GSE154519. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
The human β-globin enhancer LCR HS2 plays a role in forming a TAD by activating chromatin structure at neighboring CTCF sites
GEO Series GSE159130. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide profiling of Scc1 subunit in wild type cells and in cells in which chromatin structure is perturbed (histone H4 depletion).
GEO Series GSE121004. Saccharomyces cerevisiae. 7 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development [RNA-seq-blastocyst]
GEO Series GSE274230. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Regulation of chromatin structure by Set1 H3K4 methyltransferase and Jhd2 H3K4 demethylase [histone turnover]
GEO Series GSE81021. Saccharomyces cerevisiae. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fluo-Cast-Bright: A Deep Learning Pipeline for the Non-Invasive Prediction of Chromatin Structure and Developmental Potential in Live Oocytes
GEO Series GSE266845. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Chromatin structure profiling of mouse muscle stem cells by ATAC-seq
GEO Series GSE129745. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.