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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
SMCHD1 controls the structure and accessibility of heterochromatin and functions as an organizer of genome compartments (WGBS)
GEO Series GSE251751. Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing.
Elementary 3D organization of active and silenced E. coli genome (MicroC)
GEO Series GSE272159. Escherichia coli. 31 samples. Type: Other.
TSA-Seq Mapping of Nuclear Genome Organization
GEO Series GSE66019. Homo sapiens. 45 samples. Type: Other; Genome binding/occupancy profiling by genome tiling array.
Genome Organization Drives Chromosome Fragility
GEO Series GSE99197. Homo sapiens; Mus spretus; Mus musculus. 61 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
NFIB Is a Pioneer Factor for DNA Replication by Acting as a Genome Organizer [NS-seq]
GEO Series GSE201865. Homo sapiens. 4 samples. Type: Other.
Global analyses of cell cycle dependent changes in fission yeast genome organization reveal correlations with alterations in transcript levels [RNA-Seq]
GEO Series GSE52284. Schizosaccharomyces pombe. 6 samples. Type: Expression profiling by high throughput sequencing.
NFIB Is a Pioneer Factor for DNA Replication by Acting as a Genome Organizer [ATAC-seq II]
GEO Series GSE223437. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The global and promoter-centric 3D genome organization temporally resolved during a circadian cycle
GEO Series GSE155161. Mus musculus. 52 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (RNA-seq)
GEO Series GSE185881. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
NFIB Is a Pioneer Factor for DNA Replication by Acting as a Genome Organizer [Repli-seq]
GEO Series GSE223441. Homo sapiens. 12 samples. Type: Other.
Chromosome-level organization of the regulatory genome in the Drosophila nervous system
GEO Series GSE228095. Drosophila melanogaster. 8 samples. Type: Other.
The 3D genomics of lampbrush chromosomes highlights the role of active transcription in chromatin organization [scNOME-seq]
GEO Series GSE288411. Gallus gallus. 11 samples. Type: Other.
3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [RNA-Seq]
GEO Series GSE244951. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Systematic analysis of circadian gene expression mediated by epigenetic modification and 3D genome organization in Rice [ATAC-Seq]
GEO Series GSE213089. Oryza sativa Indica Group. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The global and promoter-centric 3D genome organization temporally resolved during a circadian cycle [RNA-Seq]
GEO Series GSE155160. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [BiSulfite-seq]
GEO Series GSE166613. Oryza sativa. 6 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide analysis of Prz1 in fission yeast reveals a novel inhibitory role in flocculation and a conserved activating role in cell wall organization [expression]
GEO Series GSE77759. Schizosaccharomyces pombe. 14 samples. Type: Expression profiling by array.
Human Core Nucleoporin Selectively Regulates Gene Transcription but is Dispensable for 3D Genome Organization
GEO Series GSE165463. Homo sapiens. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
A novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Staphylococcus aureus)
GEO Series GSE51148. Staphylococcus aureus. 33 samples. Type: Genome variation profiling by genome tiling array.
NFIB facilitates replication licensing by acting as a genome organizer
GEO Series GSE201867. Homo sapiens. 66 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.