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Fig. 2 in A report of 30 unrecorded bacterial species in Korea, isolated from marine ecosystems in 2021
Fig. 2. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their closest bacterial species in classes Alphaproteobacteria, Bacilli, Cytophagia, Flavobacteriia, Fusobacteriia, and Clostridia. Bootstrap values over 70% are shown.
Fig. 2 in A report of 24 unrecorded bacterial species in Korea belonging to the Phyla Proteobacteria and Bacteroidetes isolated in 2020
Fig. 2. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Pedobacter HMG1331, Mucilaginibacter HMG2653, Aquimarina KYW2188, and Flavihumibacter SM8. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.05 substitutions per nucleotide position, respectively.
Fig. 1 in A report of 24 unrecorded bacterial species in Korea belonging to the Phyla Proteobacteria and Bacteroidetes isolated in 2020
Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: a, SM8; b, KYW2188; c, HMG1331; d, HMG2653; e, JHSTF-R13; f, HMG1343; g, CAU 1621; h, BDTF-M8; i, MA20; j, HMG2551; k, LW_53_Sal; l, SO215; m, AsT1; n, L1_74_Sal; o, BT648; p, KYW1991; q, L1_34_Aci; r, JHSTF-R6; s, L1_104_Sal; t, LW_92_Aci; u, DM7; v, HMG1413; w, MA7; x, 17bor-14.
Fig. 1 in A report of 30 unrecorded bacterial species in Korea, isolated from marine ecosystems in 2021
Fig. 1. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their closest bacterial species in the class Gammaproteobacteria. Bootstrap values over 70% are shown.
Fig. 3 in A report of 24 unrecorded bacterial species in Korea belonging to the Phyla Proteobacteria and Bacteroidetes isolated in 2020
Fig. 3. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Serratia SO215, Citrobacter MA20, Pantoea HMG2551, Providencia LW_53_Sal, Tolumonas JH- STF-R13, Oceanisphaera HMG1343, Halomonas KYW1991, Marinobacter CAU 1621, Microbulbifer BDTF-M8, Azotobacter DM7, Pseudomonas JHSTF-R6, Pseudomonas L1_104_Sal, Pseudomonas LW 92 Aci, Steroidobacter HMG1413, Lysobacter BT648, Stenotrophomonas L1_74_Sal, Stenotrophomonas MA7, Maritimibacter AST1 and Simulacricoccus 17bor-14. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.02 substitutions per nucleotide position, respectively.
Fig. 3 in A report of 30 unrecorded bacterial species in Korea, isolated from marine ecosystems in 2021
Fig. 3. Transmission electron micrographs of scanning electron micrographs of cells of the strain isolated in this study. Strains: 1, HNI- BRBA38; 2, HNIBRBA54; 3, HNIBRBA100; 4, HNIBRBA151; 5, HNIBRBA189; 6, HNIBRBA220; 7, HNIBRBA244; 8, HNIBRBA255; 9, HNIBRBA270; 10, HNIBRBA272; 11, HNIBRBA274; 12, HNIBRBA350; 13, HNIBRBA370; 14, HNIBRBA397; 15, HNIBRBA406; 16, HNIBRBA489; 17, HNIBRBA506; 18, HNIBRBA601; 19, HNIBRBA666; 20, HNIBRBA682; 21, HNIBRBA683; 22, HNIBRBA684; 23, HNIBRBA685; 24, HNIBRBA688; 25, HNIBRBA773; 26, HNIBRBA833; 27, HNIBRBA853; 28, HNIBRBA855; 29, HNIBRBA866; 30, HNIBRBA1036. Scale bars are indicated in parenthesis after strain ID.
Fig. 3 in A report of seven unrecorded bacterial species in Korea, isolated from marine sediment
Fig. 3. Neighbor-joining (NJ) phylogenetic tree based on the 16S rRNA gene sequences between the strains isolated in this study belonging to the order Flavobacteriales. A phylogenetic tree was constructed with their relatives of the genera Gramella, Gillisia, and Arenibacter. The numbers on the nodes indicate the bootstrap values (>70%). Bar, 0.02 accumulated changes per nucleotide, respectively.
Fig. 2 in A report of seven unrecorded bacterial species in Korea, isolated from marine sediment
Fig. 2. Neighbor-joining (NJ) phylogenetic tree based on the 16S rRNA gene sequences between the strains isolated in this study belonging to the order Bacillales. A phylogenetic tree was constructed with their relatives of the genera Mesobacillus, Paenibacillus, Fictibacillus, and Brevibacillus. The numbers on the nodes indicate the bootstrap values (>70%). Bar, 0.02 accumulated changes per nucleotide, respectively.
Fig. 3 in A report of sixteen unrecorded haloarchaea species in Korea, isolated from a solar saltern
Fig. 3. Neighbor-joining (NJ) phylogenetic tree based on the 16S rRNA gene sequences between the strains isolated in this study belonging to the order Haloferacales. A phylogenetic tree was constructed with their relatives of the genera Haloferax and Halorubrum. The numbers on the nodes indicate the bootstrap values (>70%). Bar, 0.02 accumulated changes per nucleotide, respectively.
Fig. 1 in A report of sixteen unrecorded haloarchaea species in Korea, isolated from a solar saltern
Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: A, MBLA0001; B, MBLA0010; C, MBLA0028; D, MBLA0034; E, MBLA0042; F, MBLA0071; G, MBLA0123; H, MBLA0129; I, MBLA0131; J, MBLA0133; K, MBLA0135; L, MBLA0137; M, MBLA0140; N, MBLA0145; O, MBLA0170; P, MBLA0217.
Fig. 1 in A report of seven unrecorded bacterial species in Korea, isolated from marine sediment
Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: A. MBLB1969; B. MBLB2441; C. MBLB1992; D. MBLB2443; E. MBLB2135; F. MBLB2428; G. MBLB2431.
Fig. 2 in A report of sixteen unrecorded haloarchaea species in Korea, isolated from a solar saltern
Fig. 2. Neighbor-joining (NJ) phylogenetic tree based on the 16S rRNA gene sequences between the strains isolated in this study belonging to the order Halobacteriales. A phylogenetic tree was constructed with their relatives of the genera Halobacterium, Haloplanus, Salarchaeum, Haloarcula, Halomicroarcula, and Halorientalis. The numbers on the nodes indicate the bootstrap values (>70%). Bar, 0.02 accumulated changes per nucleotide, respectively.
Fig. 2 in Report on 30 unrecorded bacterial species of the phylum Firmicutes isolated from Korea in 2016
Fig. 2. Maximum-likelihood phylogenetic tree of isolates and related taxa belonging to the order Bacillales. Filled circles indicate the nodes that were recovered in the trees generated by both the neighbour-joining (NJ) and the maximum-likelihood (ML) methods. Numbers at nodes represent bootstrap values (NJ/ML) based on 1000 replicated datasets. Only values above 50% are shown. Bar, 0.1 substitutions per nucleotide position.
Fig. 1 in Report on 30 unrecorded bacterial species of the phylum Firmicutes isolated from Korea in 2016
Fig. 1. Transmission election micrographic and scanning electron micrographic images of isolated cells. Strains: 1, HMF7750; 2, ATS3402; 3, PTS2210; 4, AR23209; 5, PR23219; 6, PR23304; 7, AR23203; 8, PMA3404; 9, AMR3201; 10, AMR3203; 11, PR22215; 12, AR23201; 13, AMA2302; 14, ATS2307; 15, PR22212; 16, AR23202; 17, H18Y; 18, CAU 1342; 19, CAU 1339; 20, LPB0128; 21, LPB0129; 22, LPB0134; 23, LPB0160; 24, CF2; 25, NF3-3-1; 26, BE2-15; 27, BE2-30; 28, BE3-11; 29, JMW-27; 30, DMHB11.
Fig. 3 in Report on 30 unrecorded bacterial species of the phylum Firmicutes isolated from Korea in 2016
Fig. 3. Maximum-likelihood phylogenetic tree of isolates and related taxa belonging to the order Lactobacillales. Filled circles indicate the nodes that were recovered in the trees generated by both the neighbour-joining (NJ) and the maximum-likelihood (ML) methods and numbers at nodes represent bootstrap values (NJ/ML) based on 1000 replicated datasets. Only values above 50% are shown. Bar, 0.1 substitutions per nucleotide position.
Fig. 1 in Toxoplasma gondii in four captive kangaroos (Macropus spp.) in China: Isolation of a strain of a new genotype from an eastern grey kangaroo (Macropus giganteus)
Fig. 1. Toxoplasma gondii cysts in kangaroos or mice. A. Toxoplasma gondii cysts in the diaphragm of case 2 kangaroo, H&E. B. Toxoplasma gondii cysts in the tongue of case 2 kangaroo, H&E. C. Toxoplasma gondii cysts in the diaphragm of case 2 kangaroo, IHC. D. Toxoplasma gondii cysts in the tongue of case 2 kangaroo, IHC. E. Toxoplasma gondii-like cysts in the myocardium of case 4 kangaroo, squashed section, unstained. F. Many TgRooCHn1 Toxoplasma gondii cysts were observed in the mouse brain, 27 DPI, squashed section, unstained. Bar = 50 μm.
Fig. 4 in A report on 33 unrecorded bacterial species of Korea isolated in 2014, belonging to the class Gammaproteobacteria
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives of the order Pseudomonadales in the class Gammaproteobacteria. Sphingopyxis macrogoltabida IFO 15033T (D13723) was used as an outgroup. Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.02 changes per nucleotide.
Fig. 3 in A report on 33 unrecorded bacterial species of Korea isolated in 2014, belonging to the class Gammaproteobacteria
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives of the order Enterobacteriales, Oceanospirillales and Xanthomonadales in the class Gammaproteobacteria. Sphingopyxis macrogoltabida IFO 15033T (D13723) was used as an outgroup. Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.02 changes per nucleotide.
Fig. 2 in A report on 33 unrecorded bacterial species of Korea isolated in 2014, belonging to the class Gammaproteobacteria
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives of the order Aeromonadales, Alteromonadales and Chromatiales in the class Gammaproteobacteria. Sphingopyxis macrogoltabida IFO 15033T (D13723) was used as an outgroup. Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.02 changes per nucleotide.
Fig. 3 in Isolation and characterization of unrecorded yeasts species in the family Metschnikowiaceae and Bulleribasidiaceae in Korea
Fig. 3. Phylogenetic tree derived from neighbor-joining analysis based on the D1/D2 domains of the LSU rRNA gene sequences, showing the placement of strains YP355, YP230 and YP366 in the genus Hannaella. Bulleromyces albus CBS 500T was used as outgroup. Bootstrap values of above 50% are given at nodes based on 1,000 replicates. Bar, 0.02 substitutions per site.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.