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325 results for “molecular phylogenetic analysis”
Figure 3 from: Arifin U, Smart U, Hertwig ST, Smith EN, Iskandar DT, Haas A (2018) Molecular phylogenetic analysis of a taxonomically unstable ranid from Sumatra, Indonesia, reveals a new genus with gastromyzophorous tadpoles and two new species. Zoosystematics and Evolution 94(1): 163-193. https://doi.org/10.3897/zse.94.22120
Figure 3 Comparison of three lineages within Clade 1 based on the coloration of iris, the coloration of rear of thigh, and nuptial pad. Clade 1A (a–c), Clade 1B (c–d) and Clade 1C (g–i). Photographs were taken from ZMH.A14197, male, Provinsi Sumatera Barat (a–c); ZMH.A14194, female, Provinsi Bengkulu (d–e); MZB.AMPH.23524, male, Provinsi Sumatera Utara (f); and MZB.AMPH.29396, male, Provinsi Aceh (g–i). Photos by U. Arifin.
Figure 2 from: Arifin U, Smart U, Hertwig ST, Smith EN, Iskandar DT, Haas A (2018) Molecular phylogenetic analysis of a taxonomically unstable ranid from Sumatra, Indonesia, reveals a new genus with gastromyzophorous tadpoles and two new species. Zoosystematics and Evolution 94(1): 163-193. https://doi.org/10.3897/zse.94.22120
Figure 2 Bayesian (on the right) and Maximum Likelihood (on the left) trees showing the phylogenetic relationship of the crassiovis-group. A, B, C are distinct lineages within crassiovis-group. Black circles represent well supported nodes (PP ≥ 0.95 and BS ≥ 70). Red branches represent relationship between Clinotarsus and Huia melasma. Tadpole sequences named with specimen number_Tad_locality (province). Adult sequences named with specimen number_locality (province). MZB.AMPH.29336 and ZMH.A14197 were collected from the type locality of C. kampeni and C. crassiovis, respectively.
Figure 6 from: Arifin U, Smart U, Hertwig ST, Smith EN, Iskandar DT, Haas A (2018) Molecular phylogenetic analysis of a taxonomically unstable ranid from Sumatra, Indonesia, reveals a new genus with gastromyzophorous tadpoles and two new species. Zoosystematics and Evolution 94(1): 163-193. https://doi.org/10.3897/zse.94.22120
Figure 6 Morphological comparison of (i) dorsal, (ii) ventral, (iii) palmar, and (iv) plantar regions of Sumaterana gen. n. species. (a) S. crassiovis comb. n., ZMH.A14197, male, Provinsi Sumatera Barat; (b) S. dabulescens sp. n., ZMH.A14159, female, paratype, Provinsi Aceh; (c) S. montana sp. n., ZMH.A14194, female, paratype, Provinsi Bengkulu. Photos by U. Arifin.
Fig. 1 in Contribution to the molecular phylogenetic analysis of extant holocephalan fishes (Holocephali, Chimaeriformes)
Fig. 1 Hydrolagus colliei from the east Pacific
Fig. 2 in Molecular characterization and phylogenetic analysis of Trypanosoma spp. detected from striped leaf-nosed bats (Hipposideros vittatus) in Zambia
Fig. 2. Phylogeny of Trypanosoma cruzi clade. Phylogenetic trees of Trypanosoma cruzi clade inferred using combined gGAPDH and 18S rRNA gene sequences (1,363 bp). The phylogenetic trees with outgroup (Trypanosoma lewisi) were generated using a maximum likelihood method (A), neighbor joining method (B), and minimum evolution method (C). All bootstrap values from 1,000 replications are shown on the interior branch nodes. Our isolated Trypanosoma spp. are highlighted in bold and under line. GenBank accession numbers used in this phylogeny are listed in Table S1.
FIGURE 2 in Molecular phylogenetic analysis of the Paguristes tortugae Schmitt, 1933 complex and selected other Paguroidea (Crustacea: Decapoda: Anomura)
FIGURE 2. Schematic illustrations of unarmed (A) and armed (B) telsons.
Figure 34 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 34. Gizzard plates of Bulla quoyii (A, B) and B. vernicosa (C, D). A, Auckland, New Zealand (BMNH 20030345; H = 27.1 mm). B, Albany, Western Australia (WAM S19095; H = 42.7 mm). C, Honolulu, Hawaii (BMNH 20030042; H = 31.0 mm). D, Dili, East Timor (BMNH 20040857; H = 25.0 mm). Scale bars: A, C, D = 2 mm; B = 1 mm.
Figure 37 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 37. Variability in the female glands of Bulla ampulla (A–C), B. orientalis (D, E), B. arabica sp. nov. (F, G), B. quoyii (H, I) and B. vernicosa (J, K). Dorsal views depicted in A, E, G, H, K and anterior ventral views in B–D, F, I, J. A, B, north of Cloates, Western Australia (WAM S.19144; H = 44.0 mm). C, Nha Trag, Vietnam (BMNH 20010449; H = 49.0 mm). D, E, Taolagnaro, Madagascar (BMNH 20030672/2; H = 27.8 mm). F, G, Ras al-Khaimah, United Arab Emirates (BMNH 20060101; H = 42.2 mm). H, I, Auckland, New Zealand (BMNH 20030345; H = 29.6 mm). J, K, Lizard Island, Qld, Australia (WAM S.19142; H = 28.4 mm).
Figure 28 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 28. Involute spire and protoconch of Bulla ampulla (A, B), B. arabica sp. nov. (C), B. orientalis (D), B. peasiana (E), B. quoyii (F), and B. vernicosa (G, H). A, Kagoshima, Japan (BMNH 20060106; H = 37.0 mm). B, Noumea, New Caledonia (BMNH 20060548; H = 58.7 mm). C, Ras al-Khaimah, United Arab Emirates (BMNH 20060102; H = 39.6 mm). D, Taolagnaro, Madagascar (BMNH 20030672/2; H = 27.8 mm). E, Hilo, Hawaii (BMNH 1910.09.28.118–120). F, Auckland, New Zealand (BMNH 20030345; H = 27.1 mm). G, Panglao, Philippines (MNHN, Paris; H = 27.7 mm). H, Dili, East Timor (BMNH 20040857; H = 25.0 mm). Scale bars: A, C–D, F = 200 Mm; B, E, G–H = 50 Mm.
Figure 36 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 36. Male genital system (with details of prostate and penial duct) of Bulla orientalis (A–C), B. quoyii (D, E), and B. vernicosa (F–H). A, B C, Okinawa, Japan (BMNH 20040859; H = 22.0 mm). D, Auckland, New Zealand (BMNH 20030345; H = 29.6 mm). E, Albany, Western Australia (WAM S19095; H = 43.7 mm). F, G, Panglao, Philippines (MNHN, Paris; H = 27.7 mm). H, Honolulu, Hawaii (BMNH 20030042; H = 31.0 mm).
Figure 21 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 21. Gizzard plates of Bulla mabillei (A, B), B. solida (C, D), B. gouldiana (E–G), and B. punctulata (H–J). A, B, Tenerife Island, Canary Islands (BMNH 20020457; H = 26.5, 20.4 mm). C, off Florida (HBOM 62–281; H = 34.9 mm). D, off Florida (HBOM 65-281; H = 40.0 mm). E, Baja California, Mexico (BMNH 20050366; H = 25.4 mm). F–G, Baja California, Mexico (CAS 067260; H = 40.6, 35.4 mm). H, Guanacaste, Costa Rica (INBio 03458490; H = 13.8 mm). I, Santa Cruz Island, Galapagos (CAS 067270; H = 16.5 mm). J, Puntarenas, Costa Rica (INBio 01482898; H = 19.6 mm). Scale bars: G–J = 1 mm; A–F = 2 mm.
Figure 25 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 25. Images of living Indo-West Pacific Bulla species. A, Bulla ampulla, Tuticorin, India (H = 43 mm; photo by Malaquias). B, B. arabica sp. nov., Gulf of Aqaba, Red Sea (size unknown; adult specimen). C, B. quoyii, Edithburgh Jetty, South Australia (H = 30 mm; photo: J. Chuk). D, B. vernicosa, Panglao, Philippines (H = 30 mm; photo: M. Poddubetskaia). E, B. orientalis, Kerama Island, Japan (H = 15 mm; photo: A. Ono). F, B. vernicosa, Panglao, Philippines (H = 8 mm; photo: M. Poddubetskaia). G, B. peasiana, Hawaii (H = 15 mm; photo: S. Johnson).
Figure 19 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 19. Outer lateral teeth of radula of Bulla mabillei (A, B), B. solida (C, D), B. gouldiana (E, F), and B. punctulata (G, H). A, Tenerife Island, Canary Islands (BMNH 20020457; H = 26.9 mm). B, Tenerife Island, Canary Islands (BMNH 20030774; H = 48.4 mm). C, off Florida (HBOM 62–281; H = 38.4 mm). D, off Florida (HBOM 62–281; H = 38.4 mm). E–F, Baja California, Mexico (CAS 101586; H = 28.4 mm). G–H, Santa Cruz Island, Galapagos (CAS 067270; H = 18.1, 17.6 mm). Scale bars: A–H = 100 Mm.
Figure 38 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 38. Geographical distributions of Bulla ampulla, B. arabica sp. nov. and B. peasiana based on examined material and quoted literature records (A – Vayssière, 1906; B – Green, 1994).
Figure 11 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 11. Gizzard plates and spines of Bulla striata (A–G) and B. occidentalis (H). A, E, Naples, Italy (BMNH 20030775; H = 24.6 mm). B, C, Ria Formosa, Portugal (BMNH 20050338; H = 25.0, 30.1 mm). D, Siné-Saloum, Senegal (BMNH 20030781; H = 15.7 mm). F–G, Ria Formosa, Portugal (BMNH 20050338; H = 31.3 mm). H, Cape of Santo António, Cuba (BMNH 20050351; H = 10.2 mm). Scale bars: A–E = 1 mm; F, H = 200 Mm; G = 500 Mm.
Figure 1. A, Bulla shell. B in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 1. A, Bulla shell. B, central nervous system of B. striata (Ria Formosa, Portugal, BMNH20050338; H = 29.40 mm). C, Bulla spp., external morphology of animal. c, columella; celo, cephalic lobe; ces, cephalic shield; cg, cerebral ganglion; bg, buccal ganglion; e, eye; g, genital ganglion; H, height; is, position of the involute spire; pa, parietal ganglion; palo, parapodial lobe; pc, parietal callus; pd, pedal ganglion; pl, pleural ganglion; poa, periocular area; sb, suboesophageal ganglion; sh, shell; sp., supraoesophageal ganglion; t, tentacle; v, visceral ganglion. Scale bar = 1 mm.
Figure 5 from: Shi J-S, Liu J-C, Giri R, Owens JB, Santra V, Kuttalam S, Selvan M, Guo K-J, Malhotra A (2021) Molecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China. ZooKeys 1061: 87-108. https://doi.org/10.3897/zookeys.1061.70420
Figure 5 Bayesian inferenced tree of the genus Gloydius, along with some relative genus of the family Viperidae, based on 12S, 16S, ND4, and cytb sequences, with the maximum likelihood bootstrap supports (left, regular) and Bayesian posterior probabilities (right, italic) displayed on the nodes (those <50% are displayed as "-"). Holotypes are marked with asterisks.
Figure 4 from: Shi J-S, Liu J-C, Giri R, Owens JB, Santra V, Kuttalam S, Selvan M, Guo K-J, Malhotra A (2021) Molecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China. ZooKeys 1061: 87-108. https://doi.org/10.3897/zookeys.1061.70420
Figure 4 Color rendered three-dimensional model of Gloydius lipipengi sp. nov. (holotype, IVPP OV 2720) A dorsal view B palatal view, mandibles not shown C lateral view. Abbreviations: bo, basioccipital; bs, basisphenoid; col, columella; cp, compound bone; d, dentary; ecp, ectopterygoid; exo, exoccipital; f, frontal; na, nasal; ma, maxilla; p, parietal; pcr, prearticular crest of compound bone; pfr, prefrontal; pmx, premaxilla; po, postorbital; pp, palatine process of maxilla; pro, prootic; psp, parasphenoid rostrum; pt, pterygoid; sac, surangular crest of compound bone; spm; septomaxilla; so, supraoccipital; sp, splenial; st, supratemporal; v, vomer. Conducted by Ye-Mao Hou and Jingsong Shi.
Figure 2 from: Shi J-S, Liu J-C, Giri R, Owens JB, Santra V, Kuttalam S, Selvan M, Guo K-J, Malhotra A (2021) Molecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China. ZooKeys 1061: 87-108. https://doi.org/10.3897/zookeys.1061.70420
Figure 2 Holotype of Gloydius lipipengi sp. nov. (IVPP OV 2720) in preservative A dorsal view B ventral view.
Figure 7 from: Shi J-S, Liu J-C, Giri R, Owens JB, Santra V, Kuttalam S, Selvan M, Guo K-J, Malhotra A (2021) Molecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China. ZooKeys 1061: 87-108. https://doi.org/10.3897/zookeys.1061.70420
Figure 7 The habitat of Gloydius lipipengi sp. nov. (A Muza Village, Zaty, Tibet, type locality of G. lipipengi sp. nov. B the landscape of the Nujiang River, 15 km from the type locality) and Gloydius swild sp. nov. (C Heishui, Sichuan) A and B Photographs by Jin-Cheng Liu.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.