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Everham's Plots KML shapefile and coordinates
Everham's Control Plots (2), Recovery and Germination Plots and KML shapefile and coordinates Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Fern distribution in El Verde CREST plots
A fern survey was done of the plots established by under CREST funding to assess controls on primary productivity along an elevational gradient. The control plots (CP), fertilized plots (FP) and plots where only leaf litter (ll) was removed at El Verde were survey and all ferns present in the plots listed, mapped and measured in Fall of 1995, several years after the initial fertilization and leaf litter treatment had been applied. The objective was to determine the extent to which the fern flora had been affected by the treatments. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Long-Term Elevation Plots (LTEP) (Altitudinal transects vegetation data along three rivers in the Luquillo Experimental Forest)
The composition of plant communities changes with elevation in the Luquillo Experimental Forest (LEF). The goal of this project is to document the patterns of these changes, and in particular, to determine whether the distributions of individual species are independent of one another, or whether they are related, in either a congruent or a hierarchical manner. Thirty-two permanent vegetation plots, each 50m by 20m are being established in the LEF, with 5 plots along the Icacos river, 11 along the Mamayes river and 16 along the Sonadora stream. The plots were established at every 100m in elevation, starting at 200m above sea level. All woody, free-standing stems greater than 1cm dbh were marked, identified and mapped into 5x5 subquadrats. We anticipated that gradient analysis will show whether the distributions of species are coincident or independent, enabling us to evaluate whether separate, genuine plant communities exist in the LEF. Because the plots are permanent, we also expected that they allow us to better evaluate how different vegetation types, at different elevations, respond to large scale disturbances, especially hurricanes. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Ferns surveys of individuals of terrestrial ferns in Canopy Trimming Experiment (CTE) plots document changes in species richness and abundance over time in response to canopy opening and/or debris deposition
Whole plot surveys of Canopy Triming Experiment (CTE) plots were done to detect changes in the number of terrestrial fern species and individuals in response to canopy opening and debris deposition. Surveys were conducted annually prior to and after treatments. A count of all terrestrial ferns, identified to species on the CTE plots was recorded for each subplot in January during CTE1 (2002-2010) and in the fall during CTE2 (2014-present). The surveys document losses of individuals of shade tolerant fern species and the appearance of open canopy ferns such as the tree fern Cyathea arborea. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Revegetation of landslides, vegetation <0.1m (Small landslide plots at the Luquillo Experimental Forest)
The purpose of this study is to document the recovery of vegetation on new landslides in the Luquillo Experimental Forest, in particular seedlings less then 1m tall. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Canopy Trimming Experiment (CTE) Plot Treatments
This data set is updated every time a trim is performed on the plots. The last trim was in 2014. The Luquillo Experimental Forest LTER program in Puerto Rico was initially focused on the understanding of the effects that two major hurricanes, Hugo in 1989 and George in 1998, had on the structure and function of a tropical mountain forest and how the biota responded to these disturbances. This focus provided insights into the key characteristics of disturbance that alter forest function over long time scales. After several years of research through the LEF-LTER program, it became clear that one primary effect of disturbances associated with the impact of a hurricane is to redistribute organic matter from live biomass compartments to the detrital pool. Then a combination of biotic and abiotic processes, all modified by the disturbance, contributes to the decomposition of detritus and to the subsequent fate of associated C and nutrients. These critical regulating processes define detrital dynamics and play a central role in the recovery of forest structure and function by regulating decomposition and therefore carbon and nutrient storage and flow. Our understanding of hurricane impacts comes from measurements of the effects of naturally occurring hurricanes on tabonuco forest and comparisons with similar disturbances in other forests (Walker et al. 1991, 1996a). Base on the evaluation of long-term measurements after the impact of hurricane Hugo and George it becomes clear that the two primary effects of hurricane disturbance are changes in microclimate and redistribution of biomass, and that the interaction of both factors propagate through the system in complex ways. These measurements are informative but cannot tease apart the effects of various aspects of hurricane disturbance and suffer from the lack of a control or reference condition. From this assessment the LUQ-LTER principal investigators jointly identified the need for an experimental manipulation to decouple
Chemistry of soil solution collected from tension lysimeters in the Canopy Trimming Experiment (CTE) plots
Soil solution chemistry: Soil solution was collected monthly from tension lysimeters installed in the CTE plots. Sampling began prior to cutting the canopy and continue to the present. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Flooded forest plot sampling in Ecuador
In order to better understand how flooding and gap formation affect Amazonian rainforests, I set up plots both in three major forest types that differed by flooding duration (referred to here as dry, wet, very wet) and in their respective gaps. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Bird abundance-mist nets in the Luquillo Forest Dynamics Plot and Nora Devoe Cut Plots in the Luquillos Experimental Forest
This project seeks to measure long-term trends and variability in bird populations in tabonuco forest at El Verde. Repeated measures of bird populations using mist nets are conducted annually in the Luquillo Forest Dynamics Plot. For each bird caught, I obtain physical measurements (weight, length of wing, length of tail), and estimates of fat, age, and breeding condition. Captured birds are marked to estimate mortality and longevity. Data on canopy openness are also collected annually at each mist net as part of this project. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
LFDP phenology plot seedlings-16 ha plot
These data on temporal and spatial patterns of seedling recruitment in conjunction with data on flower and seed rain production allow tests of hypotheses concerning causes of inter-annual variation and roles of different mechanisms in facilitating species coexistence. The data are being used to, among other things 1) quantify seasonal and inter-annual variation in reproductive output in tropical plant populations and communities; 2) analyze relationships between reproduction and a variety of hypothesized local and regional climate drivers; 3) evaluate evidence for long-term directional trends which could reflect responses to anthropogenic global change; 4) quantify spatiotemporal variation in seed arrival and seedling recruitment of individual species; 5) analyze associated evidence of recruitment limitation, life history trade-offs, density dependent recruitment and regeneration niche partitioning; and 6) evaluate how these processes interact with inter-annual variation in climate and plant reproduction. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Revegetation of landslides, vegetation > 1.0m (Large landslide plots at the Luquillo Experimental Forest)
Here we use permanent plot data sampled from 16 landslide to documents temporal successional pathways in landslide patches (without the use of a chronosequence, cf. Guariguata 1990) and address the following questions: (1) What are the successional pathways of landslide and what species define them? How much pathway variation of individual plots is there within these landslides? (2) How similar are pathways among landslide? Is there any evidence that, with time, landslides either converge to a common vegetative enpoint or slow in the rate of successional change? The purpose of this study is to document the recovery of vegetation on new landslides in the Luquillo Experimental Forest. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Plots_Klawinski Plots KML shapefile and coordinates
The coordinates and shapefile (kml) of the Paul Klawinsky plots near El Verde Field Station Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Luquillo Forest Dynamics Plot (LFDP) Liana Data
Liana demographic data from the 16-Ha Big Grid (LFDP) over time: These data contain liana and tree data for two demographic censuses (summer 2001 and summer 2015) from 20 randomly selected quadrats within the LFDP (10 in the northern LFDP -cover classes 1-3 sensu Thompson et al. 2002) and 10 in the southern LFDP (cover class 4 sensu Thompson et al. 2002). Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Riparian and upland understory vegetation lifeforms and leaf-litterfall ordination analyses in the Luquillo Forest Dynamics Plot
Riparian areas are proportionally a small component of the forested landscape, they are significant contributors to ecosystem process, terrestrial and aquatic linkages, plant community composition, as well to basal energy resources for aquatic fauna. We describe vegetation and leaf-litterfall composition in relation to past land use in riparian and upland locations in tropical wet forest, Luquillo Forest Dynamics Plot (LFDP), Luquillo Experimental Forest, Puerto Rico. Data collected from 2003 to 2005. Stratified sampling was conducted in riparian and upland areas of LFDP with high and low past land use. Understory vegetation life-form composition were sampled in plots. \<para\> Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.\</para\>
Howard T. Odum Radiation Plot shapefile and coordinates
The coordinates and shapefile (kml) of the Howard T. Odum's Atomic Energy Commission (AEC) The Rain Forest Project, 1963-1967 near El Verde Field Station Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Regeneration after Hurricane Hugo, woody species > 10 cm tall (9Ha grid, El Verde) (9Ha Plots Small Data Set)
The purpose of this data set is to document vegetation damage and recovery following Hurricane Hugo, a borderline category 3-4 hurricane with winds from 130 to 160mph (110kts) and a pressure of 945 to 946.1 mb, which hit Puerto Rico in September 18th, 1989 Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Frog population plots (El Verde and Bisley)
Population records were compiled for the tropical frog, Eleutherodactylus coqui, by conducting four-night censuses of four 20 X 20 m long-term study plots in the Luquillo Experimental Forest of Puerto Rico between 1987 and 2017. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Elevation at grid points on the Luquillo Forest Dynamics Plot (LFDP)
This file contains data that describe the physical and environmental attributes of the LFDP. The attributes include elevation, topography type, and percentage slope. All data are given for the 20 m by 20 m quadrat scale. Information on soils are taken form an interpolation of the soil map produced by the Natural Resources Conservation Service, US Department of Agriculture (Soil Survey 1995). Other information from the elevation of each of the corner posts defining the quadrats. The National Science Foundation requires that data from projects it funds are posted on the web two years after any data set has been organized and "cleaned". The data from each census of the LFDP will be updated at intervals as each survey of the LFDP shows errors in the previous data collection. After posting on the web, researchers who are not part of the project are then welcome to use the data. Given the enormous amount of time, effort and resources required to manage the LFDP, obtain these data, and ensure data accuracy, LFDP Principal Investigators request that researchers intending to use this data comply with the requests below. Through complying with these requests we can ensure that the data are interpreted correctly, analyses are not repeated unnecessarily, beneficial collaboration between users is promoted and the Principle Investigators investment in this project is protected. Submit to the LFDP PIs a short (1 page) description of how you intend to use the data; · Invite LFDP PIs to be co-authors on any publication that uses the data in a substantial way (some PIs may decline and other LFDP scientists may need to be included); If the LFDP PIs are not co-authors, send the PIs a draft of any paper using LFDP data, so that the PIs may comment upon it; In the methods section of any publication using LFDP data, describe that data as coming from the "Luquillo Forest Dynamics Plot, part of the Luquillo Experimental Forest Long-Term Ecological Research Program"; Acknowledge in any pu
Physical environment of the Luquillo Forest Dynamics Plot (LFDP), Puerto Rico
This file contains data that describe the physical and environmental attributes of the LFDP. The attributes include elevation, topography type, and percentage slope. All data are given for the 20 m by 20 m quadrat scale. Information on soils are taken form an interpolation of the soil map produced by the Natural Resources Conservation Service, US Department of Agriculture (Soil Survey 1995). Other information from the elevation of each of the corner posts defining the quadrats.The National Science Foundation requires that data from projects it funds are posted on the web two years after any data set has been organized and “cleanedâ€. The data from each census of the LFDP will be updated at intervals as each survey of the LFDP shows errors in the previous data collection. After posting on the web, researchers who are not part of the project are then welcome to use the data. Given the enormous amount of time, effort and resources required to manage the LFDP, obtain these data, and ensure data accuracy, LFDP Principal Investigators request that researchers intending to use this data comply with the requests below. Through complying with these requests we can ensure that the data are interpreted correctly, analyses are not repeated unnecessarily, beneficial collaboration between users is promoted and the Principle Investigators investment in this project is protected. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Tree damage by Hurricane Hugo on the Luquillo Forest Dynamics Plot (LFDP), Puerto Rico
Hurricane Hugo struck the Caribbean national forest in September 1989. Files LFDP_HURRDAM.TXT and LFDP_HURRDAMa.TXT contain data on the damage to trees caused by the hurricane collected by Mr. R. DeLeon between August 1990 and September 1991. Mr. DeLeon walked throughout the plot to find stems >= 10 cm diameter that had apparently been damaged or killed by the hurricane in an effort to collect information before the damaged stems rotted. The information on these stems was later combined with the results of the first census to reconstruct the forest, as it would have appeared, at the time of Hurricane Hugo. This file contains the hurricane damage data collected for stems damaged by Hurricane Hugo combined with data for the stems recorded subsequently in the first complete LFDP census starting in 1990. Some stems that were measured in Census 1 survey 2 and survey 3 or Census 2 that were believed to have been missed in Census 1 survey 1, are also included (see census history above) and are assumed to have been undamaged by Hurricane Hugo. The structure of the data files is the same for both files LFDP_HURRDAM.TXT and LFDP_HURRDAMa.TXT but the diameter of the trees in LFDP_HURRDAMa.TXT have been calculated by extrapolating diameters backwards from subsequent measurements to the time of the Census 1 survey 1. Diameters in file LFDP_HURRDAMa.TXT can not be used for growth measurements. For our publications we treat files LFDP_HURRDAM.TXT and LFDP_HURRDAMa.TXT as one data set. The National Science Foundation requires that data from projects it funds are posted on the web two years after any data set has been organized and "cleaned". The data from each census of the LFDP will be updated at intervals as each survey of the LFDP shows errors in the previous data collection. After posting on the web, researchers who are not part of the project are then welcome to use the data. Given the enormous amount of time, effort and resources required to manage the LFDP, obtain these d
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.