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3,788 results for “indices”
CMS: Fire Weather Indices for Interior Alaska, 2001-2010
This dataset provides daily fire weather indices for interior Alaska during the active fire seasons from 2001 to 2010. Data are gridded at 60-m resolution. The active fire season is defined as May 24-September 18 (days of the year 144-261) in this dataset. Fire weather is the use of meteorological parameters such as relative humidity, wind speed and direction, cloud cover, mixing heights, and soil moisture to determine whether conditions are favorable for fire growth and smoke dispersion. The six indices provided in this dataset are defined and produced following the methodology of the Canadian Forest Fire Weather Index System: Fine Fuel Moisture Code, Duff Moisture Code, Drought Code, Initial Spread Index, Buildup Index, Fire Weather Index. The dataset was developed following point source data interpolation from weather station observations.
G-LiHT Hyperspectral Vegetative Indices V001
Goddard’s LiDAR, Hyperspectral, and Thermal Imager ([G-LiHT](https://gliht.gsfc.nasa.gov/)) mission is a portable, airborne imaging system that aims to simultaneously map the composition, structure, and function of terrestrial ecosystems. G-LiHT primarily focuses on a broad diversity of forest communities and ecoregions in North America, mapping aerial swaths over the Conterminous United States (CONUS), Alaska, Puerto Rico, and Mexico.The purpose of G-LiHT’s Hyperspectral Vegetative Indices data product (GLHYVI) is to provide vegetative, stress, and other index data in 44 science dataset layers. Included in the product are vegetative indices such as Normalized Difference Vegetation Index (NDVI), Triangular Vegetation Index (TVI), Renormalized Difference Vegetation Index (RDVI), Modified Triangular Vegetation Index (MTVI), and Difference Vegetation Index (DVI). Stress indices include, but are not limited to, Carter Stress, Gitelson and Merzlyac Stress, Maccioni Stress, and Vogelmann Stress.GLHYVI data are processed as a raster data product (GeoTIFF) at 1 meter spatial resolution over locally defined areas. A browse image displaying NDVI is also included.
Vegetation Index and Phenology (VIP) Vegetation Indices Daily Global 0.05Deg CMG V004
The NASA Making Earth System Data Records for Use in Research Environments ([MEaSUREs](https://earthdata.nasa.gov/about/competitive-programs/measures)) Vegetation Index and Phenology (VIP) global datasets were created using Advanced Very High Resolution Radiometer (AVHRR) N07, N09, N11, and N14 datasets (1981 - 1999) and Moderate Resolution Imaging Spectroradiometer (MODIS)/Terra MOD09 surface reflectance data (2000 - 2014). The VIP Vegetation Index (VI) product was developed to provide consistent measurements of the Normalized Difference Vegetation Index (NDVI) and modified Enhanced Vegetation Index (EVI2) spanning more than 30 years of data from multiple sensors. The EVI2 is a backward extension of AVHRR. Vegetation indices such as NDVI and EVI2 are useful for assessing the biophysical properties of the land surface, and are used to characterize vegetation phenology. Phenology tracks the seasonal life cycle of vegetation, and provides information on the biotic response to environmental changes. The VIP01 VI data product is a daily global file at 0.05 degree (5600 meter (m)) spatial resolution in geographic (Lat/Lon) grid format. The data are stored in Hierarchical Data Format-Earth Observing System (HDF-EOS) file format. The VIP01 VI product contains 11 Science Datasets (SDS), which includes the calculated VIs (NDVI and EVI2) as well as information on the quality assurance/pixel reliability, the input Visible/Near Infrared (VNIR) surface reflectance data, and viewing geometry. The Blue and Middle Infrared (MIR) surface reflectance data are only available for the MODIS era (2000 - 2014). Gaps in the daily product are filled using long term mean VI records derived from the more than 30 year time series of data, and are indicated as gap-filled in the Pixel Reliability SDS. A low resolution browse image showing NDVI as a color map is also available.Known Issues* The Relative Azimuth Angle (RAA) for the input MODIS data is computed based on absolute values of the finer resolution pixels resulting in positive values and has minor usefulness.* The RAA for the input AVHRR data contain values in the -360° to 360° range. The routine to restrict the values in the -180° to 180° range was accidentally missed and can be corrected using the following routine described in Section 4.2.1 of the User Guide and Algorithm Theoretical Basis Document: * SinRelativeAz=sin(RAA) * CosRelativeAz=cos(RAA) * Correct-RAA = atan2(SinRelativeAz,CosRelativeAz)
MODIS/Terra Vegetation Indices 16-Day L3 Global 0.05Deg CMG V061
The Terra Moderate Resolution Imaging Spectroradiometer (MODIS) Vegetation Indices 16-Day (MOD13C1) Version 6.1 product provides a Vegetation Index (VI) value at a per pixel basis. There are two primary vegetation layers. The first is the Normalized Difference Vegetation Index (NDVI) which is referred to as the continuity index to the existing National Oceanic and Atmospheric Administration-Advanced Very High Resolution Radiometer (NOAA-AVHRR) derived NDVI. The second vegetation layer is the Enhanced Vegetation Index (EVI), which has improved sensitivity over high biomass regions.The Climate Modeling Grid (CMG) consists 3,600 rows and 7,200 columns of 5,600 meter (m) pixels. Global MOD13C1 data are cloud-free spatial composites of the gridded 16-day 1 kilometer [MOD13A2](https://doi.org/10.5067/MODIS/MOD13A2.061) data, and are provided as a Level 3 product projected on a 0.05 degree (5,600 m) geographic CMG. The MOD13C1 has data fields for NDVI, EVI, VI QA, reflectance data, angular information, and spatial statistics such as mean, standard deviation, and number of used input pixels at the 0.05 degree CMG resolution. Known Issues* For complete information about known issues please refer to the [MODIS/VIIRS Land Quality Assessment website](https://landweb.modaps.eosdis.nasa.gov/knownissue?sensor=MODIS&sat=Terra&as=61).Improvements/Changes from Previous Versions* The Version 6.1 Level-1B (L1B) products have been improved by undergoing various calibration changes that include: changes to the response-versus-scan angle (RVS) approach that affects reflectance bands for Aqua and Terra MODIS, corrections to adjust for the optical crosstalk in Terra MODIS infrared (IR) bands, and corrections to the Terra MODIS forward look-up table (LUT) update for the period 2012 - 2017.* A polarization correction has been applied to the L1B Reflective Solar Bands (RSB).
VIIRS/JPSS1 Vegetation Indices 16-Day L3 Global 500m SIN Grid V002
The NOAA-20 Visible Infrared Imaging Radiometer Suite (VIIRS) Vegetation Indices (VJ113A1) Version 2 data product provides vegetation indices by a process of selecting the best available pixel over a 16-day acquisition period at 500 meter (m) resolution. The VJ113 data products are designed after the Moderate Resolution Imaging Spectroradiometer (MODIS) Terra and Aqua Vegetation Indices product suite to promote the continuity of the Earth Observation System (EOS) mission.The VJ113 algorithm process produces three vegetation indices: Normalized Difference Vegetation Index (NDVI), the Enhanced Vegetation Index (EVI), and Enhanced Vegetation Index-2 (EVI2). NDVI is one of the longest continual remotely sensed time series observations, using both the red and near-infrared (NIR) bands. EVI is a slightly different vegetation index that is more sensitive to canopy cover, while NDVI is more sensitive to chlorophyll. EVI2 is a reformation of the standard 3-band EVI, using the red band and NIR band. This reformation addresses arising issues when comparing VIIRS EVI to other EVI models that do not include a blue band. EVI2 will eventually become the standard EVI. Along with the three Vegetation Indices layers, this product also includes layers for NIR reflectance; three shortwave infrared (SWIR) reflectance; red, blue, and green reflectance; composite day of year; pixel reliability; relative azimuth, view, and sun angles; and a quality layer. Two low resolution browse images are also available for each VJ113A1 product: EVI and NDVI.Known Issues* Due to missing critical inputs, this product lacks coverage for tiles h33v07 and h18v14, which are located over water.* For complete information about known issues please refer to the [MODIS/VIIRS Land Quality Assessment website](https://landweb.modaps.eosdis.nasa.gov/knownissue?sensor=VIIRS) and the User Guide and ATBD.Improvements/Changes from Previous Version* Improved calibration algorithm and coefficients for entire NOAA-20 mission.* Improved geolocation accuracy and applied updates to fix outliers around maneuver periods.* Corrected the aerosol quantity flag (low, average, high) mainly over brighter surfaces in the mid- to high-latitudes such as desert and tropical vegetation areas. This has an impact on the retrieval of other downstream data products such as VNP13 Vegetation Indices and VNP43 Bidirectional Reflectance Distribution Function (BRDF)/Albedo.* Improved cloud mask input product for corrections along coastlines and artifacts from use of coarse resolution climatology data. * Replaced the land/water mask input product with the eight-class land/water mask from the VNP03 geolocation product that better aligns with MODIS.* Modified QA VI Usefulness bits to ignore BRDF flag.* Implemented VI specific land/water mask.* More details can be found in this [VIIRS Land V2 Changes document](https://landweb.modaps.eosdis.nasa.gov/data/userguide/VIIRS_Land_C2_Changes_09152022.pdf).
HLS Operational Land Imager Vegetation Indices Daily Global 30 m V2.0
The Harmonized Landsat and Sentinel-2 (HLS) project provides consistent data products from the Operational Land Imager (OLI) aboard the joint NASA/USGS Landsat 8 and Landsat 9 satellites and the Multi-Spectral Instrument (MSI) aboard Europe’s Copernicus Sentinel-2A, Sentinel-2B, and Sentinel-2C satellites. The combined measurement enables global observations of the land every 2–3 days at 30 meter (m) spatial resolution. The HLSL30 Vegetation Indices (HLSL30_VI) product is derived from Landsat 8 and Landsat 9 OLI data products. Vegetation indices combine specific bands of satellite data to quantify various aspects of vegetation. Analysis of vegetation indices allows for tracking changes in vegetation over time, identifying areas of stress or deforestation, and assessing crop health. Vegetation indices provide a reliable and efficient means of understanding the complex dynamics of vegetation health. The HLSS30_VI and HLSL30_VI products are gridded to the same resolution and Military Grid Reference System ([MGRS](https://hls.gsfc.nasa.gov/products-description/tiling-system/)) tiling system and thus are “stackable” for time series analysis.The HLSL30_VI product is provided in Cloud Optimized GeoTIFF (COG) format, and each variable is distributed as a separate file. Nine indicators of vegetation health are included in the HLSL30_VI product: Normalized Difference Vegetation Index (NDVI), Enhanced Vegetation Index (EVI), Soil Adjusted Vegetation Index (SAVI), Modified Soil Adjusted Vegetation Index (MSAVI), Normalized Difference Moisture Index (NDMI), Normalized Difference Water Index (NDWI), Normalized Burn Ratio (NBR), Normalized Burn Ratio 2 (NBR2), and Triangular Vegetation Index (TVI). See the User Guide for a more detailed description of the individual vegetation health variables provided in the HLSL30_VI product.
Integrative genomic, transcriptomic and RNAi analysis indicates a potential oncogenic role for FAM110B in castration-resistant prostate cancer.
GEO Series GSE28403. Homo sapiens. 47 samples. Type: Expression profiling by array; Genome variation profiling by genome tiling array.
In vitro pigmentation of human iPSC-derived retinal pigment epithelium cells is not indicative of their quality for cell transplantation
GEO Series GSE242184. Homo sapiens. 4022 samples. Type: Expression profiling by high throughput sequencing.
Identification of NOTCH-driven matrisome-associated genes as prognostic indicators of multiple myeloma patient survival
GEO Series GSE221038. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Tumor Heterogeneity in Metastatic Potential is Indicated by Adhesion Strength
GEO Series GSE135515. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis between single-cell RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise
GEO Series GSE263194. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Uncharged tRNAGln as an indicator of intracellular amino acid level upregulates UBC expression to maintain its charging level VI
GEO Series GSE188861. Homo sapiens. 20 samples. Type: Non-coding RNA profiling by high throughput sequencing.
CD271/p75NTR is a novel diagnostic marker, prognostic indicator and therapeutic target in SHH medulloblastoma
GEO Series GSE107701. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Granulosa cell-derived serum TNF-α mediates inflammation and apoptosis in renal tubular cells through NF-κB signaling and indicates PCOS-related kidney injury.
GEO Series GSE229106. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Uncharged tRNAGln as an indicator of intracellular amino acid level upregulates UBC expression to maintain its charging level III
GEO Series GSE188858. Homo sapiens. 8 samples. Type: Other.
PFKFB3 overexpression in monocytes of patients with colon but not rectal cancer programs pro-tumor macrophages and is indicative for higher risk of tumor relapse [GeoMx]
GEO Series GSE221924. Homo sapiens; synthetic construct. 99 samples. Type: Other.
Extracellular vesicles as prospective biological indicators for midgestational placental complications in the mouse
GEO Series GSE301046. Mus musculus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptome analyses of 7-day-old zebrafish larvae possessing a familial Alzheimer’s disease-like mutation in psen1 indicate effects on oxidative phosphorylation, mcm functions, and iron homeostasis
GEO Series GSE148631. Danio rerio. 24 samples. Type: Expression profiling by high throughput sequencing.
A genome-wide microRNA profiling indicates miR-424-5p and miR-503-5p as regulators of ALK expression in neuroblastoma(NB Samples)
GEO Series GSE86652. Homo sapiens. 20 samples. Type: Non-coding RNA profiling by array.
Alcohol-Induced Alterations in Sperm Noncoding RNAs Persist After One Month Cessation and Correlate with Indicators of Epididymal Mitochondrial Dysfunction II
GEO Series GSE270836. Mus musculus. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.