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3,109
datasets available to search
ShareScore release 0.9.0
Dataset results
3,109 results for “sequence analysis”
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and OsAFB6 overexpression mutant Transcriptomes
GEO Series GSE106954. Oryza sativa. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of E. coli MukB distribution using ChIP-sequencing
GEO Series GSE67221. Escherichia coli K-12. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Quantitative Analysis of Cerebral Cortex Transcriptomes of BrapcKO Mice and their Wildtype-like Control Mice by Next-Generation Sequencing
GEO Series GSE183383. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of Lactic acid Treated Human Treg cells Transcriptomes
GEO Series GSE276640. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing Analysis of Human Embryonic Stem Cell-Derived Neural Organoids
GEO Series GSE218457. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of Osteoblast Mineralization Transcriptomes
GEO Series GSE148203. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Medulloblastoma exome sequence analysis
Medulloblastomas are the most common malignant brain tumors in children. Identifying and understanding the genetic events that drive these tumors is critical for the development of more effective diagnostic, prognostic and therapeutic strategies. Recently, our group and others described distinct molecular subtypes of medulloblastoma based on transcriptional and copy number profiles. Here, we utilized whole exome hybrid capture and Illumina sequencing to identify somatic mutations across the coding regions of 92 primary medulloblastoma/normal pairs.
RNA-sequencing analysis of gilt blood gene expression during Porcine Reproductive and Respiratory Syndrom Virus infection
GEO Series GSE75304. Sus scrofa. 48 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of hepatic macrophages Transcriptomes in dnTGFβRII(TG) cholangitis model
GEO Series GSE186712. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of Dura macrophage Transcriptomes post adoptive T cell reconstitution of RAG-1 deficient mice II
GEO Series GSE120485. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of WT and WT+CXCL14 mouse endothelial cells' Transcriptomes in mammary gland
GEO Series GSE207137. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Discovery and verification of liver cancer marker genes and variable scission based on second-generation sequencing data analysis
GEO Series GSE136846. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and OsPEP1 Ri1 transgenic line in response to exogenous PEP1 Transcriptomes
GEO Series GSE173487. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Analysis of the effect of exogenous auxin on the regulatory relationship between miRNA and its target genes in rose using high-throughput sequencing [RNA-seq]
GEO Series GSE225991. Rosa hybrid cultivar. 10 samples. Type: Expression profiling by high throughput sequencing.
RNA-Sequencing quantitative analysis of transcriptomes changes between veh., and glutamate with or without P.edulis extracts treated mouse hippocampal HT-22 cells
GEO Series GSE184358. Hippocampus. 4 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing facilitates quantitative analysis of U118-NC and U118-SPNS2 transcriptomes
GEO Series GSE237314. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
The effect of WB436B or siRNA towards STAT3 on the whole-transcriptome analysis with total RNA sequencing (RNA-Seq) in BxPC3 cells
GEO Series GSE217399. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of WT and HY5 mutant Transcriptomes
GEO Series GSE154416. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA-Sequencing Analysis of of heart tissue from murine model of endotoxemia
GEO Series GSE215131. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis of 43 distinct RNA modifications by nanopore tRNA sequencing - RNA004 data
<p>This project focuses on nanopore direct tRNA sequencing method refinement and benchmarking of RNA modification detection between Oxford Nanopore's previous direct RNA sequencing chemistry, RNA002, and the RNA004 chemistry released in November 2023. The majority of the data was collected during a December 2023 tRNA sequencing workshop sponsored by the Hesselberth lab at the University of Colorado, in which participants prepared matched sequencing libraries using both chemistries from tRNA isolated from six different species.</p> <p>Fastq data has been submitted to the SRA (GSE272876); here we are hosting the raw POD5 data from all libraries prepared with RNA004 chemistry as well as select libraries prepared with the deprecated RNA002 chemistry for signal reanalysis.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.