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2,848 results for “sequence data”
Data Deposit for "Ligation-based Assay for Variant-Typing without Sequencing: Application to SARS-CoV-2 Variants of Concern"
<p>No description provided.</p>
The non-reference sequence data and the gene annotation information of chicken linear pan-genome
Open the record for dataset details and reuse information.
Transcriptome sequencing and proteome sequencing data of Hela cells transfected with Cas13d
<p>Transcriptome sequencing and proteome sequencing data of Hela cells transfected with Cas13d.</p>
RNA SEQUENCING DATA OF VANCOMYCIN TREATED HTB172 LUNG CANCER CELL LINE AND CONTROL,
GEO Series GSE248676. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Adaptive local false discovery rate procedures for highly spiky data and their application to RNA sequencing data of yeast SET4 deletion mutants
GEO Series GSE173653. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing.
The small RNA sequencing data of EcoHIV-infected mouse brain tissue derived extracellular vesicles
GEO Series GSE182743. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide bisulfite sequencing (Xmal-RRBS) of 50 breast cancer samples for jointly using with NGS and chromosomal microarray data
GEO Series GSE190126. Homo sapiens. 50 samples. Type: Methylation profiling by high throughput sequencing.
Next-generation RNA-sequencing data of models of Ewing sarcoma with modulated expression of the lncRNA HOTAIR
GEO Series GSE109483. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing data of microglia isolated from brains of WT, Hexb-tdTomato, Hexb-CreERT2 and Hexb-KO mice.
GEO Series GSE148413. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
SPECtre: a spectral coherence-based classifier of actively translated transcripts from ribosome profiling sequence data
GEO Series GSE75947. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Re-sequencing data used for calling CNVs
GEO Series GSE123857. Sus scrofa. 1 samples. Type: Other.
Characterizing the properties of bisulfite sequencing data: maximizing power and sensitivity to identify differences in DNA methylation
GEO Series GSE169235. Mus musculus; Homo sapiens; Rattus norvegicus. 205 samples. Type: Methylation profiling by genome tiling array; Methylation profiling by high throughput sequencing.
The CRISPR Screen sequencing raw data
GEO Series GSE217997. Homo sapiens. 10 samples. Type: Other.
Bulk RNA sequencing data of rice roots protoplasted for 2.5 hours and 3 hours, as well as rice roots grown in gel, non-compacted soil and compacted soil conditions
GEO Series GSE283428. Oryza sativa. 15 samples. Type: Expression profiling by high throughput sequencing.
sequencing data in multiple cell lines
GEO Series GSE206145. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Data for the paper "Rapid hippocampal plasticity supports motor sequence learning"
<p>Data for the paper "Rapid hippocampal plasticity supports motor sequence learning"</p>
Data associated with a sequence of publications on polysaccharide/gelatin edible films incorporated with astaxanthin
<p>This repository contains the dataset needed for the papers concerning polysaccharide/gelatin edible films incorporated with increasing concentrations of synthetic water-soluble AstaSana astaxanthin. This dataset contains physicochemical, release, and antioxidant properties of binary (75/25) carboxymethyl cellulose/ gelatin, octenyl succinic anhydride starch/ gelatin, gum Arabic/gelatin, and water-soluble soy polysaccharide/gelatin blend films supplemented with increasing concentrations (0, 0.25, 0.5, 1%) of astaxanthin. The database has been developed within the National Science Centre (Poland)-funded project number 2019/35/N/NZ9/01795.</p>
Supplementary Data for "Phosphorus variations in volcanic sequences reveal the linkage between regional tectonics and terrestrial biota evolution" in G-Cubed.
<p>Supplementary data tables for Ma et al. (2022) associated with the paper entitled "Phosphorus variations in volcanic sequences reveal the linkage between regional tectonics and terrestrial biota evolution" published in <em>G-Cubed</em>.</p>
Ligation-based Assay for Variant-Typing without Sequencing: Application to SARS-CoV-2 Variants of Concern [Data Deposit]
<p>Data analyzed for the results of the original research article "<strong>Ligation-based Assay for Variant-Typing without Sequencing: Application to SARS-CoV-2 Variants of Concern</strong>".</p>
RNA sequencing data from breast precancerous and cancerous cells - Part1/3
<p>RNA sequencing data (fastq files) from breast precancerous and cancerous cell lines (total of 12 cell lines) as described in the paper entitled "CD56 expression in breast cancer induces sensitivity to natural killer-mediated cytotoxicity by enhancing the formation of cytotoxic immunological synapse" by Taouk et al.</p> <p>The file name is "sample number_replicate number_overall sample number_read direction_001", where:</p> <p>- Sample number: represents the cell line (can be determined from supplementary figures 1, 3 and 5 of the above mentioned paper).</p> <p>- Replicate number: RNA from two independent experiments for each cell line (1 is for first replicate and 2 for the second replicate).</p> <p>- Overall sample number: random numbers given for all samples</p> <p>- Read direction: R1 (forward), R2 (reverse)</p> <p>This dataset (part1/3) contains fastq files for samples 1 to 4.</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.