Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Bacterial single-cell RNA sequencing captures biofilm transcriptional heterogeneity and differential responses to immune pressure
GEO Series GSE270986. Staphylococcus aureus. 2 samples. Type: Expression profiling by high throughput sequencing.
DMSO cryopreservation: the method of choice for droplet-based single-cell RNA sequencing of preserved cells [Drop-Seq]
GEO Series GSE127246. Homo sapiens; Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Systematic investigation of cytokine signaling activity at the tissue and single-cell levels
GEO Series GSE174686. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing.
Low-Cell-Number, Single-Tube Amplification (STA) of RNAs Revealed miRNA Changes from Pluripotency to Endothelium
GEO Series GSE93672. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Single Cell RNA sequence data from a human ovarian cancer sample
GEO Series GSE123476. Homo sapiens. 93 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic profiling of corneal epithelium of diabetic non-human primates reveals that FOXO3 regulates ROS by reprogramming glucose metabolism
GEO Series GSE197745. Homo sapiens; Macaca fascicularis. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic analysis (InDrops) of mouse CD4+ T cells isolated from colon
GEO Series GSE132573. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Microfluidics-free single-cell genomics reveals complex central-peripheral immune crosstalk in the mouse brain during peripheral inflammation
GEO Series GSE245309. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Dynamic changes of lung homeostasis from development-to-aging single-cell atlas
GEO Series GSE260769. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell mRNA sequencing of TAC-model mouse heart tissue
GEO Series GSE120064. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
High-resolution, noninvasive single-cell lineage tracing in mice and humans based on DNA methylation epimutations [LK_RNAseq; transcriptome of single cells]
GEO Series GSE262219. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of cardiac CD45+ immune cells 24 hours after ischemia-reperfusion injury in mice with or without splenectomy
GEO Series GSE282100. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals differentiation hierarchy of normal human bone marrow and a distinct transcriptome signature of aneuploid cells
GEO Series GSE99095. Homo sapiens. 1202 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing to Decipher the Immunogenicity of ChAdOx1 nCoV-19/AZD1222 and mRNA-1273 Vaccines in Patients with Autoimmune Rheumatic Diseases
GEO Series GSE203081. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects (ICELL8)
GEO Series GSE133541. Canis lupus familiaris; Mus musculus; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Neonatal and adult human testis defined at the single-cell level
GEO Series GSE124263. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level of immune cells from ileum of ArpC5 mutant and control mice
GEO Series GSE298330. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from GM12878 (ENCSR000AJH)
GEO Series GSE78313. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level of sclerotome-derived fibroblasts from 52 hours post fertilization (hpf) transgenic zebrafish trunks.
GEO Series GSE229939. Danio rerio. 1 samples. Type: Expression profiling by high throughput sequencing.
Deciphering the molecular mechanism of flight loss in mulberry silkworm through the integration of single-cell and spatial transcriptomics [stRNA-seq]
GEO Series GSE253665. Bombyx mandarina; Bombyx mori. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.