Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
3,508
datasets available to search
ShareScore release 0.9.0
Dataset results
3,508 results for “reprogramming”
Genome-Wide DNA Methylation Encodes Cardiac Transcriptional Reprogramming in Human Ischemic Heart Failure [DNA Methylation]
GEO Series GSE109096. Homo sapiens. 11 samples. Type: Methylation profiling by genome tiling array.
Mitohormesis reprograms macrophage metabolism to enforce tolerance [BMDM_ChIPseq]
GEO Series GSE169729. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CCL3-Mediated Inflammatory Reprogramming of the Hepatocellular Carcinoma Microenvironment Enhances Macrophage Antigen Presentation and Adaptive Immune Response (RNA-Seq)
GEO Series GSE277065. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Metabolic reprogramming of Kaposi’s sarcoma associated herpes virus infected B-cells in hypoxia
GEO Series GSE114625. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [WGBS_Mm]
GEO Series GSE87062. Mus musculus. 15 samples. Type: Methylation profiling by high throughput sequencing.
Chemical reprogramming of fibroblasts into functional retinal pigment epithelium cells (scRNA-seq)
GEO Series GSE287517. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Human oocytes reprogram somatic cells to a pluripotent state
GEO Series GSE28024. Homo sapiens. 37 samples. Type: Expression profiling by array.
Precision targeting of beta-catenin induces tumor reprogramming and immunity in hepatocellular cancers [Bulk RNA-seq CTNNB1/MET/IRF2]
GEO Series GSE270415. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
In vivo reprogramming drives Kras-induced cancer development [expression]
GEO Series GSE100840. Mus musculus. 8 samples. Type: Expression profiling by array.
Aberrant non-canonical NF-κB signalling reprograms the epigenome landscape to drive oncogenic transcriptomes in multiple myeloma [ATAC-seq]
GEO Series GSE230277. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CIRCADIAN RHYTHM REPROGRAMMING DURING LUNG INFLAMMATION
GEO Series GSE59444. Mus musculus. 192 samples. Type: Expression profiling by array.
SIRT3 opposes metabolic reprogramming of cancer cells through HIF1a destabilization
GEO Series GSE27309. Mus musculus. 10 samples. Type: Expression profiling by array.
Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis
Plants are primary producers of food and oxygen on Earth and will likewise be indispensable to the establishment of large-scale sustainable ecosystems and human survival in space. To contribute to the understanding of how plants respond to spaceflight stresses, we examined the relevance of the unfolded protein response (UPR), a conserved signaling cascade that responds to a number of unfavorable environmental stresses, in the model plant species Arabidopsis thaliana. To do so, we compared the transcriptional responses of wild type and UPR-defective seedlings to spaceflight during the SpaceX-CRS12 mission to the International Space Station. We established that orbital culture substantially altered the expression of hundreds of stress related genes compared to ground control conditions. Although many of these genes were differentially regulated in the UPR mutants in the ground control conditions compared to wild type, their expression was largely equalized in all genotypes by flight. Our results have yielded new information on how plants respond to growth in orbit and support the hypothesis that spaceflight induces the activation of signaling pathways that compensate for the loss of UPR regulators in the control of downstream transcriptional regulatory networks.
Development of gene expression signatures for identifying novel factors that can overcome age-associated reprogramming barriers
GEO Series GSE79747. Mus musculus. 3 samples. Type: Expression profiling by array.
A miRNA Cassette Reprograms Smooth Muscle Cells into Endothelial Cells
GEO Series GSE181925. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
R-loops Function as a Balance during Somatic Cell Reprogramming
GEO Series GSE125644. Mus musculus. 82 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genetic stability in FA cells before and after gene editing and cell reprogramming.
GEO Series GSE56790. Homo sapiens. 4 samples. Type: Genome variation profiling by array.
Notch inhibition in microRNA-mediated neuronal reprogramming promotes neurite extension
GEO Series GSE252626. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Species-specific metabolic reprogramming in human and mouse microglia during inflammatory pathway induction
GEO Series GSE221013. Homo sapiens; Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
Alternate high fat diet aggravates atherosclerosis through an IL1b-dependent reprogramming of neutrophil progenitors
GEO Series GSE252604. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.