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Data from: New populations of the black-flanked rock-wallaby (Petrogale lateralis) from the Little Sandy Desert and Murchison, Western Australia
During two independent fauna surveys, rock-wallaby (Petrogale) scats were recorded from caves located outside the current known Petrogale distribution. Scats collected from Desert Queen Baths (Little Sandy Desert, Western Australia, 2012), and the Barr Smith Range (Murchison, Western Australia, 2015) were genetically analysed and a follow-up motion camera survey confirmed an extant rock-wallaby population at Desert Queen Baths. The combination of sampling techniques overcame the detection difficulties associated with rare and cryptic taxa, and together were important in establishing the presence of Petrogale lateralis from regions where the species has been poorly documented. At both locations, P. lateralis scats were recorded from deep caves situated close to permanent water, reflecting the species' physiological constraints in the arid zone. These records represent significant range extensions of a highly threatened macropod.
Data from: Positive selection of deleterious alleles through interaction with a sex-ratio suppressor gene in African buffalo: a plausible new mechanism for a high frequency anomaly
Although generally rare, deleterious alleles can become common through genetic drift, hitchhiking or reductions in selective constraints. Here we present a possible new mechanism that explains the attainment of high frequencies of deleterious alleles in the African buffalo (Syncerus caffer) population of Kruger National Park, through positive selection of these alleles that is ultimately driven by a sex-ratio suppressor. We have previously shown that one in four Kruger buffalo has a Y-chromosome profile that, despite being associated with low body condition, appears to impart a relative reproductive advantage, and which is stably maintained through a sex-ratio suppressor. Apparently, this sex-ratio suppressor prevents fertility reduction that generally accompanies sex-ratio distortion. We hypothesize that this body-condition-associated reproductive advantage increases the fitness of alleles that negatively affect male body condition, causing genome-wide positive selection of these alleles. To investigate this we genotyped 459 buffalo using 17 autosomal microsatellites. By correlating heterozygosity with body condition (heterozygosity-fitness correlations), we found that most microsatellites were associated with one of two gene types: one with elevated frequencies of deleterious alleles that have a negative effect on body condition, irrespective of sex; the other with elevated frequencies of sexually antagonistic alleles that are negative for male body condition but positive for female body condition. Positive selection and a direct association with a Y-chromosomal sex-ratio suppressor are indicated, respectively, by allele clines and by relatively high numbers of homozygous deleterious alleles among sex-ratio suppressor carriers. This study, which employs novel statistical techniques to analyse heterozygosity-fitness correlations, is the first to demonstrate the abundance of sexually-antagonistic genes in a natural mammal population. It also has important implications for our understanding not only of the evolutionary and ecological dynamics of sex-ratio distorters and suppressors, but also of the functioning of deleterious and sexually-antagonistic alleles, and their impact on population viability.
Data from: A revision of the concept of Mago O. Pickard-Cambridge, 1882, and proposal of a new genus (Araneae: Salticidae: Amycini)
In this paper we redescribe the type species of Mago O. Pickard-Cambridge, M. intentus O. Pickard-Cambridge, and describe Mago brimodes Ruiz & Maddison sp. nov. from Ecuador. Based on both morphological features and the 16SND1 gene region, we concluded that the larger spiders traditionally identified as Mago, such as Mago acutidens Simon and related species, are not closely related to the small dark M. intentus (type species) and M. brimodes. Matinta Ruiz & Maddison gen. nov. is therefore proposed to hold most species previously included in Mago. The following species are transferred from Mago to the new genus: Matinta acutidens (Simon, 1900) comb. nov. (type species), Matinta apophysis (Costa & Ruiz, 2017) comb. nov., Matinta balbina (Patello & Ruiz, 2014) comb. nov., Matinta chickeringi (Caporiacco, 1954) comb. nov., Matinta delicata (Patello & Ruiz, 2014) comb. nov., Matinta fasciata (Mello-Leitão, 1940) comb. nov., Matinta fonsecai (Soares & Camargo, 1948) comb. nov., Matinta furcata (Costa & Ruiz, 2017) comb. nov., Matinta jurutiensis (Patello & Ruiz, 2014) comb. nov., Matinta longidens (Simon, 1900) comb. nov., Matinta mimica (Costa & Ruiz, 2017) comb. nov., Matinta opiparis (Simon, 1900) comb. nov., Matinta pardo (Costa & Ruiz, 2017) comb. nov., Matinta procax (Simon, 1900) comb. nov., Matinta saperda (Simon, 1900) comb. nov., Matinta silvae (Crane, 1943) comb. nov., Matinta similis (Patello & Ruiz, 2014) comb. nov., Matinta steindachneri (Taczanowski, 1878) comb. nov. and Matinta vicana (Simon, 1900) comb. nov. Mago dentichelis Crane, 1949 is transferred to Noegus Simon.
Data from: A lower jaw of Palaeoxonodon from the Middle Jurassic of the Isle of Skye, Scotland, sheds new light on the diversity of British stem therians
The Middle Jurassic was a key interval of mammalian evolutionary history that witnessed the diversification of the therian stem-group. Great Britain has yielded a significant record of mammalian fossils from this interval, represented by numerous isolated jaws and teeth from the Bathonian of Oxfordshire and the Isle of Skye. This record captures a key period in early cladotherian evolution, with amphitheriids, peramurans and "stem zatherians" displaying intermediate talonid morphologies that document the evolutionary assembly of tribosphenic molars. We present a mandible with near-complete dentition from the late Bathonian (ca. 167.4–166.5 Ma) Kilmaluag Formation, near Elgol, Skye, representing the amphitheriid Palaeoxonodon ooliticus, previously known only from isolated teeth. The specimen sheds new light on the taxonomic diversity of British Middle Jurassic stem therians, as the morphological variation within the preserved tooth row encompasses that previously ascribed to three distinct species within two genera: Palaeoxonodon ooliticus, P. freemani, and Kennetheridium leesi. Thus, both P. freemani and Kennetheridium leesi are subjective junior synonyms of P. ooliticus. The dental formula of P. ooliticus (i4:c1:p5:m5) is intermediate between the primitively larger postcanine count (p5:m6-7) of Amphitherium and the reduced number in peramurans and tribosphenidans (p5:m3). Phylogenetic analyses of P. ooliticus generally confirm a close affinity with Amphitherium, but highlight the lack of strong empirical support for hypothesized patterns of divergences among early cladotherians.
Data from: A second New World hover fly, Toxomerus floralis (Fabricius) (Diptera: Syrphidae), recorded from the Old World, with description of larval pollen-feeding ecology
Recently (2013–2014), several hoverfly specimens from two localities in Benin and Cameroon (West and Central Africa) were caught from a species that we could not identify using existing identification keys for Afrotropical Syrphidae. Specific identification as Toxomerus floralis (Fabricius) was accomplished using morphology and various Neotropical identification keys. Corroboration of this identification was made by sequencing of the standard COI barcode region and a subsequent BLAST-IDS in BOLD that revealed a 100% sequence similarity with Toxomerus floralis from Suriname (South America). Species identification was further supported by sequencing parts of the nuclear 18S and 28S rRNA genes. The species is widespread in Togo, Benin, Nigeria and Cameroon, and eggs, larvae and adults are abundant at several localities. Yet, the full extent of its geographic distribution within tropical Africa remains to be determined. This is only the second known established introduction of a non-African hoverfly species in the Afrotropics. Interestingly, the larvae of the species have been reported as predators of Aphididae and Delphacidae but we found them to be pollenivorous, which is a rare feeding mode within the subfamily Syrphinae. Moreover, it is the only known Syrphinae species of which the larvae feed on pollen from two plant species from different families (Cyperaceae and Orobranchaceae). This example illustrates how DNA barcoding may allow a fast and accurate identification of introduced species.
Data from: Phylogeography of western Mediterranean Cymbalaria (Plantaginaceae) reveals two independent long-distance dispersals and entails new taxonomic circumscriptions
The Balearic Islands, Corsica and Sardinia (BCS) constitute biodiversity hotspots in the western Mediterranean Basin. Oligocene connections and long distance dispersal events have been suggested to cause presence of BCS shared endemic species. One of them is Cymbalaria aequitriloba, which, together with three additional species, constitute a polyploid clade endemic to BCS. Combining amplified fragment length polymorphism (AFLP) fingerprinting, plastid DNA sequences and morphometrics, we inferred the phylogeography of the group and evaluated the species' current taxonomic circumscriptions. Based on morphometric and AFLP data we propose a new circumscription for C. fragilis to additionally comprise a group of populations with intermediate morphological characters previously included in C. aequitriloba. Consequently, we suggest to change the IUCN category of C. fragilis from critically endangered (CR) to near threatened (NT). Both morphology and AFLP data support the current taxonomy of the single island endemics C. hepaticifolia and C. muelleri. The four species had a common origin in Corsica-Sardinia, and two long-distance dispersal events to the Balearic Islands were inferred. Finally, plastid DNA data suggest that interspecific gene flow took place where two species co-occur.
Data from: Faberia pinnatifida (Asteraceae; Cichorieae), a new species from Sichuan, China
Faberia pinnatifida (Asteraceae; Cichorieae), a species occurring at high altitudes in Muli and Yanyuan Xian, Sichuan, China, is described as new based on morphological, palynological and molecular phylogenetic data. The ITS data indicate that F. pinnatifida is closely related to F. glaucescens and F. thibetica, but it is easily distinguished from F. glaucescens by its scapigerous stem with only one or two leaves, and from F. thibetica in its much taller stature and elliptic to oblanceolate leaf blade. Faberia pinnatifida somewhat resembles F. ceterach in the scapigerous stem and pinnatifid leaves, but readily differs in its corymbiform synflorescence and nodding capitula bearing ca. 30 florets.
Data from: Tisaniba, a new genus of marpissoid jumping spiders from Borneo (Araneae: Salticidae)
Six new species of marpissoid jumping spiders from Sarawak, Borneo, are described in the new genus Tisaniba Zhang & Maddison. They are the type species, T. mulu Zhang & Maddison sp. nov., as well as the species T. bijibijan Zhang & Maddison sp. nov., T. dik Zhang & Maddison sp. nov., T. kubah Zhang & Maddison sp. nov., T. selan Zhang & Maddison sp. nov., and T. selasi Zhang & Maddison sp. nov. The spiders are small and brown to black, living in leaf litter in the tropical forest. Phylogenetic analyses based on 28s and 16sND1 genes indicate that they are a distinctive group within the marpissoids. Diagnostic illustrations and photographs of living spiders are provided for all species.
Data from: Elasmobranch bycatch in the demersal prawn trawl fishery in the Gulf of Papua, Papua New Guinea
The elasmobranch bycatch of the Gulf of Papua Prawn Fishery is investigated in detail for the first time. Fisheries observers collected data on the elasmobranch bycatch from a total of 403 trawl sets (1,273 hrs) in the Gulf of Papua. A total of 40 species of elasmobranchs were recorded ranging in size from a 12 cm disc width stingray to a 350 cm total length sawfish. High mortality rates were recorded (>80%), attributed to the long trawl durations (up to 4 hours). The future inclusion of bycatch reduction devices would likely reduce the number of larger elasmobranchs being caught and is being investigation by the PNG National Fisheries Authority. Differences in catch compositions were detected across the management zones as well as between the two monsoonal seasons (SE Monsoon and NW Monsoon). Increased monitoring and additional research is required and management plans should address the elasmobranch bycatch and in particular their high mortality rate.
Data from: Dental status of New Caledonian children: is there a need for a new oral health promotion programme?
Background: Before implementing a new oral health promotion program in the French overseas territory of Nouvelle Calédonie, the health authorities needed recent data about dental status of the New Caledonian child population. Objectives: This study aimed to describe the dental status of 6, 9 and 12-yr-old New Caledonian children and to investigate the environmental and behavioural risk factors related to oral health. Methods: A randomly selected sample of 2734 children (744 6-yr-olds, 789 9-yr-olds, and 1201 12-yr-olds) was examined clinically by seven calibrated investigators and participants responded to a questionnaire. The main variables were objective criteria about dental status and subjective criteria about experience of dental care, dental fear, self-perception of oral health, cultural or ethnic identity and environmental and behavioural risk factors. Results: Overall, most of the children had infectious oral diseases: more than 50% had gingivitis, and 60% of 6- and 9 yr-olds had at least one deciduous or permanent tooth with untreated caries. The mean 12-yr-old number of decayed missing and filled teeth (DMFT) was 2.09±2.82. The number of carious lesions was related to the unfavourable lifestyle, deprived social status and no preventive dental care. Kanak, Polynesians and Caledonians (respectively 27%, 18% and 45% of the study sample) were more affected by caries than metropolitan French and Asian children. Children with many untreated carious lesions had negative perceptions of their oral health; they complained of chewing difficulty and had higher scores for dental anxiety. Conclusion: This study highlights the need for new strategies aimed at improving oral health and at reducing inequalities in New Caledonia. An oral health promotion program would need to be developed in connection with other health programmes using the common risk factor approach within the context of the local environment.
Data from: Analyses of phenotypic differentiations among South Georgian Diving Petrel (Pelecanoides georgicus) populations reveal an undescribed and highly endangered species from New Zealand
Unresolved taxonomy of threatened species is problematic for conservation as the field relies on species being distinct taxonomic units. Differences in breeding habitat and results from a preliminary molecular analysis indicated that the New Zealand population of the South Georgian Diving Petrel (Pelecanoides georgicus) was a distinct, yet undescribed, species. We measured 11 biometric characters and scored eight plumage characters in 143 live birds and 64 study skins originating from most populations of P. georgicus, to assess their taxonomic relationships. We analysed differences with principal component analyses (PCA), factorial ANOVAs, and Kruskal-Wallis rank sum tests. Results show that individuals from New Zealand differ significantly from P. georgicus from all other populations as following: 1) longer wings, 2) longer outer tail feathers, 3) deeper bills, 4) longer heads, 5) longer tarsi, 6) limited collar extent, 7) greater extent of contrasting scapulars, 8) larger contrasting markings on the secondaries, 9) paler ear coverts, 10) paler collars, and 11) paler flanks. Furthermore, we used a species delimitation test with quantitative phenotypic criteria; results reveal that the New Zealand population of P. georgicus indeed merits species status. We hereby name this new species Pelecanoides whenuahouensis sp. nov. Due to severe reductions in its range and the very low number of remaining birds (~150 individuals limited to a single breeding colony on Codfish Island/Whenua Hou) the species warrants listing as 'Critically Endangered'.
Data from: Invasion of two tick-borne diseases across New England: harnessing human surveillance data to capture underlying ecological invasion processes
Modelling the spatial spread of vector-borne zoonotic pathogens maintained in enzootic transmission cycles remains a major challenge. The best available spatio-temporal data on pathogen spread often take the form of human disease surveillance data. By applying a classic ecological approach—occupancy modelling—to an epidemiological question of disease spread, we used surveillance data to examine the latent ecological invasion of tick-borne pathogens. Over the last half-century, previously undescribed tick-borne pathogens including the agents of Lyme disease and human babesiosis have rapidly spread across the northeast United States. Despite their epidemiological importance, the mechanisms of tick-borne pathogen invasion and drivers underlying the distinct invasion trajectories of the co-vectored pathogens remain unresolved. Our approach allowed us to estimate the unobserved ecological processes underlying pathogen spread while accounting for imperfect detection of human cases. Our model predicts that tick-borne diseases spread in a diffusion-like manner with occasional long-distance dispersal and that babesiosis spread exhibits strong dependence on Lyme disease.
Data from: Cryptotermes colombianus a new drywood termite and distribution record of Cryptotermes in Colombia
A new species of drywood termite (Kalotermitidae), Cryptotermes colombianus, is described and new records for Cryptotermes cylindroceps and Cryptotermes mangoldi are presented from the Caribbean coast of Colombia. C. colombianus is described from two soldiers and genetic sequences. This unusual species differs noticeably from other regional Cryptotermes species for its weak and inconspicuous definition of the frontal and genal horns and its acute angle of the frons with respect to the vertex. C. colombianus clustered with species from the Ethiopian and Oriental region and it is closely related to Cryptotermes havilandi. C. cylindroceps is widely distributed along the Colombian Caribbean coast, commonly associated with dead wood in mangrove habitats. It also is commonly found in wooden furniture, constituting an important household pest. C. mangoldi is reported from the Caribbean mainland for the first time. With these new records, there are now five Cryptotermes species for Colombia, including the pest species Cryptotermes brevis and Cryptotermes dudleyi. This new description raises the numbers of Neotropical Cryptotermes to a total of 34 species, of which 2 are fossils, 4 introduced, and 28 endemic.
Data from: The Wisdom of Fools: new molecular and morphological insights into the North American apodetiate species of Cladonia
The taxonomy of the North American apodetiate and superficially apodetiate species of Cladonia with persistent, primarily squamulose thalli (viz., C. apodocarpa, C. caespiticia, and C. petrophila) is revised using morphological, chemical, and ecological data in combination with molecular phylogenetic analyses of ITS1, 5.8S, and ITS2 sequence data. The results of this approach confirm some established taxonomic concepts in the group and raise doubts about others. The taxon known as C. apodocarpa is well supported by likelihood- and parsimony-based molecular phylogenetic inferences as well as morphology, chemistry, and ecology. However, molecular evidence gives an equivocal answer to the question of whether C. petrophila is a distinct monophyletic entity or if C. apodocarpa is nested within it. In addition, no phylogenetic structure is detected for the chemical races of C. petrophila with and without fumarprotocetraric acid, based on the markers used in these analyses. However, C. petrophila does remain well supported as a taxon by chemistry (i.e., the presence of sphaerophorin), morphology, and ecology. A morphologically and ecologically distinct new taxon is described as C. stipitata. We confirm the distant relationship of these taxa (C. apodocarpa, C. petrophila, and C. stipitata) to C. caespiticia, a species with stipitate or pseudopodetiate (vs. sessile) apothecia. A treatment of the North American apodetiate species of Cladonia including distribution maps, cited specimens, and illustrations is presented. A key to the taxa that includes unrelated, frequently sterile species of Cladonia found in eastern North America is also provided.
Data from: Moorean and Tahitian Partula tree snail survival after a mass extinction: new genomic insights using museum specimens
Natural history museum collections provide a biodiversity window into the past and are of particular importance to the study of extinction-impacted clades such as the Pacific Island tree snail family Partulidae. Deliberate introduction of the predatory rosy wolf snail Euglandina rosea in the late 20th century led to the extinction/extirpation of 55/61 Society Island Partulidae species. In this study, we phylogenomically investigated the inter-relationships of the three surviving Society Island valley Partula species: P. taeniata (Moorea), P. clara and P. hyalina (Tahiti). All three formed a distinct clade in earlier mitochondrial phylogenies. Using Next Generation Sequencing (NGS) double digested Restriction Associated DNA sequencing (ddRADseq), we found that 46-year-old lyophilized museum specimens produced similar numbers of reads, sequencing depth, and loci as 10-year old ethanol-preserved collections. Phylogenomic trees indicated that Tahitian P. clara and P. hyalina are the result of a single founding lineage from Moorea, contrasting previous mitochondrial results and clarifying the enigmatic taxonomic status of P. c. incrassa. Our study highlights the utility and viability of NGS techniques for museum specimens and their increased resolution of evolutionary patterns. Sampling will be expanded to include the remaining Society Island partulid taxa to further explore the evolutionary history of this radiation.
Data from: Diversification in continental island archipelagos: new evidence on the roles of fragmentation, colonization and gene flow on the genetic divergence of Aegean Nigella (Ranunculaceae)
Background and Aims: Disentangling the relative roles of past fragmentation (vicariance), colonization (dispersal) and post-divergence gene flow in the genetic divergence of continental island organisms remains a formidable challenge. Amplified fragment length polymorphisms (AFLPs) were used to (1) gain further insights into the biogeographical processes underlying the Pleistocene diversification of the Aegean Nigella arvensis complex; (2) evaluate the role of potential key factors driving patterns of population genetic variability (mating system, geographical isolation and historical contingencies); and (3) test the robustness of conclusions previously drawn from chloroplast (cp) DNA. Methods: Genetic diversity was analysed for 235 AFLP markers from 48 populations (497 individuals) representing 11 taxa of the complex using population genetic methods and Bayesian assignment tests. Key Results: Most designated taxa are identifiable as genetically distinct units. Both fragmentation and dispersal-driven diversification processes occurred at different geological time scales, from Early to Late Pleistocene, specifically (1) sea barrier-induced vicariant speciation in the Cyclades, the Western Cretan Strait and Ikaria; and (2) bi-regional colonizations of the 'Southern Aegean Island Arc' from the Western vs. Eastern Aegean mainland, followed by allopatric divergences in Crete vs. Rhodos and Karpathos/Kasos. Outcrossing island taxa experienced drift-related demographic processes that are magnified in the two insular selfing species. Population genetic differentiation on the mainland seems largely driven by dispersal limitation, while in the Central Aegean it may still be influenced by historical events (island fragmentation and sporadic long-distance colonization). Conclusions: The biogeographical history of Aegean Nigella is more complex than expected for a strictly allopatric vicariant model of divergence. Nonetheless, the major phylogeographical boundaries of this radiation are largely congruent with the geography and history of islands, with little evidence for ongoing gene exchange between divergent taxa. The present results emphasize the need to investigate further biological and landscape features and contemporary vs. historical processes in driving population divergence and taxon diversification in Aegean plant radiations.
Data from: Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation
Domestication and selective breeding has resulted in over 1000 extant cattle breeds. Many of these breeds do not excel in important traits but are adapted to local environments. These adaptations are a valuable source of genetic material for efforts to improve commercial breeds. As a step toward this goal we identified candidate regions to be under selection in genomes of nine Russian native cattle breeds adapted to survive in harsh climates. After comparing our data to other breeds of European and Asian origins we found known and novel candidate genes that could potentially be related to domestication, economically important traits and environmental adaptations in cattle. The Russian cattle breed genomes contained regions under putative selection with genes that may be related to adaptations to harsh environments (e.g., AQP5, RAD50, and RETREG1). We found genomic signatures of selective sweeps near key genes related to economically important traits, such as the milk production (e.g., DGAT1, ABCG2), growth (e.g., XKR4), and reproduction (e.g., CSF2). Our data point to candidate genes which should be included in future studies attempting to identify genes to improve the extant breeds and facilitate generation of commercial breeds that fit better into the environments of Russia and other countries with similar climates.
Data from: A new ophiocistioid with soft-tissue preservation from the Silurian Herefordshire Lagerstätte, and the evolution of the holothurian body plan
Reconstructing the evolutionary assembly of animal body plans is challenging when there are large morphological gaps between extant sister taxa, as in the case of echinozoans (echinoids and holothurians). However, the inclusion of extinct taxa can help bridge these gaps. Here we describe a new species of echinozoan, Sollasina cthulhu, from the Silurian Herefordshire Lagerstätte, UK. S. cthulhu belongs to the ophiocistioids, an extinct group that shares characters with both echinoids and holothurians. Using physical-optical tomography and computer reconstruction, we visualize the internal anatomy of S. cthulhu in three dimensions, revealing inner soft tissues that we interpret as the ring canal, a key part of the water vascular system that was previously unknown in fossil echinozoans. Phylogenetic analyses strongly suggest that Sollasina and other ophiocistioids represent a paraphyletic group of stem holothurians, as previously hypothesized. This allows us to reconstruct the stepwise reduction of the skeleton during the assembly of the holothurian body plan, which may have been controlled by changes in the expression of biomineralization genes.
Data from: Multiple micronutrient status and predictors of anemia in young children aged 12-23 months living in New Delhi, India
Anemia has been identified as a severe public health concern among young children in India, however, information on the prevalence of anemia attributed to micronutrient deficiencies is lacking. We aimed to assess multiple micronutrient status (iron, zinc, selenium, vitamin A, vitamin D, folate and vitamin B12) in young Indian children and to investigate the role of these seven micronutrients and other non-nutritional factors on hemoglobin concentrations and anemia. One-hundred and twenty children aged 12 to 23 months were included in a cross-sectional nutritional assessment survey, of which 77 children provided a blood sample. Hemoglobin (Hb), serum ferritin, soluble transferrin receptor (sTfR), total body iron, zinc, selenium, retinol binding protein (RBP), folate, vitamin B12 and 25-hydroxyvitamin D (25(OH)D) were measured, and adjusted for inflammation using C-reactive protein (CRP) and α-1-acid glycoprotein (AGP), where appropriate. Predictors for hemoglobin and anemia were identified in multiple regression models. Most of the children were classified as anemic, of which 86 to 93% was associated with iron deficiency depending on the indicator applied. Deficiencies of folate (37%), and notably vitamin D (74%) were also common; fewer children were classified with deficiencies of vitamin B12 (29%), zinc (25%), and vitamin A (17%) and selenium deficiency was nearly absent. Multiple micronutrient deficiencies were common with over half (57%) deficient in three or more micronutrients, and less than 10% of children were classified with adequate status for all the micronutrients measured. Iron status was found to be the only nutritional factor statistically significantly inversely associated with anemia (P = 0.003) in multivariate analysis after controlling for sex. A coordinated multi-micronutrient program is urgently needed to combat the co-existing micronutrient deficiencies in these young children to improve micronutrient status and reduce the high burden of childhood anemia.
Data from: New suspension-feeding radiodont suggests evolution of microplanktivory in Cambrian macronekton
The rapid diversification of metazoans and their organisation in modern-style marine ecosystems during the Cambrian profoundly transformed the biosphere. What initially sparked this Cambrian explosion remains passionately debated, but the establishment of a coupling between pelagic and benthic realms, a key characteristic of modern-day oceans, might represent a primary ecological cause. By allowing the transfer of biomass and energy from the euphotic zone—the locus of primary production—to the sea floor, this biological pump would have boosted diversification within the emerging metazoan-dominated benthic communities. However, little is known about Cambrian pelagic organisms and their trophic interactions. Here we describe a filter-feeding Cambrian radiodont exhibiting morphological characters that likely enabled the capture of microplankton-sized particles, including large phytoplankton. This description of a large free-swimming suspension-feeder potentially engaged in primary consumption suggests a more direct involvement of nekton in the establishment of an oceanic pelagic-benthic coupling in the Cambrian.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.