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4,144 results for “ITS barcode”
Supplementary material 6 from: Mahima K, Umapathy S, Sudhakar JV, Sathishkumar R (2021) Systematic reinstatement of highly sacred Ficus krishnae based on differences in morphology and DNA barcoding from Ficus benghalensis (Moraceae). PhytoKeys 186: 121-138. https://doi.org/10.3897/phytokeys.186.74086
Figure S1. Multiple sequence alignment of ITS2 in Ficus krishnae and Ficus benghalensis
Supplementary material 1 from: Mahima K, Umapathy S, Sudhakar JV, Sathishkumar R (2021) Systematic reinstatement of highly sacred Ficus krishnae based on differences in morphology and DNA barcoding from Ficus benghalensis (Moraceae). PhytoKeys 186: 121-138. https://doi.org/10.3897/phytokeys.186.74086
Table S1. The PCR reaction conditions for the barcoding loci
Supplementary material 5 from: Mahima K, Umapathy S, Sudhakar JV, Sathishkumar R (2021) Systematic reinstatement of highly sacred Ficus krishnae based on differences in morphology and DNA barcoding from Ficus benghalensis (Moraceae). PhytoKeys 186: 121-138. https://doi.org/10.3897/phytokeys.186.74086
Table S5. The data matrix of vegetative and floral characters
Supplementary material 1 from: Radulovici AE, Vieira PE, Duarte S, Teixeira MAL, Borges LMS, Deagle BE, Majaneva S, Redmond N, Schultz JA, Costa FO (2021) Revision and annotation of DNA barcode records for marine invertebrates: report of the 8 th iBOL conference hackathon. Metabarcoding and Metagenomics 5: e67862. https://doi.org/10.3897/mbmg.5.67862
Figure S1 and Tables S1–S10
Supplementary material 1 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Table S1. Genetic distances between COI sequences of Oxyscelio from southern China
Figure 5 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 5 Oxyscelio stenos Mo & Chen, sp. nov., holotype, female (SCAU 3049080) A dorsal habitus B lateral habitus C head and mesosoma, dorsal view D head and mesosoma, lateral view E head, anterior view F antenna G metasoma, dorsal view H metasoma, ventral view.
Figure 4 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 4 Oxyscelio latheticus Mo & Chen, sp. nov., holotype, female (SCAU 3049073) A dorsal habitus B lateral habitus C head and mesosoma, dorsal view D head and mesosoma, lateral view E head, anterior view F antenna G metasoma, dorsal view H metasoma, ventral view.
Figure 1 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 1 Maximum likelihood tree demonstrating the clustering of OxyscelioCOI barcodes. Bootstraps values of 50 and above are indicated.
Figure 3 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 3 Oxyscelio apheles Mo & Chen, sp. nov., holotype, female (SCAU 3049046) A dorsal habitus B lateral habitus C head and mesosoma, dorsal view D head and mesosoma, lateral view E head, anterior view F Antenna G metasoma, dorsal view H metasoma, ventral view.
Figure 6 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 6 Oxyscelio striae Mo & Chen, sp. nov., holotype, female (SCAU 3048667) A dorsal habitus B lateral habitus C head and mesosoma, dorsal view D head and mesosoma, lateral view E head, anterior view F antenna G metasoma, dorsal view H metasoma, ventral view.
Figure 2 from: Mo W-h, Chen H-y, Pang H, Liu J-x (2021) DNA barcoding for molecular identification of the genus Oxyscelio (Hymenoptera, Scelionidae) from southern China, with descriptions of five new species. In: Lahey Z, Talamas E (Eds) Advances in the Systematics of Platygastroidea III. Journal of Hymenoptera Research 87: 613-633. https://doi.org/10.3897/jhr.87.71912
Figure 2 Oxyscelio amalocarina Mo & Chen, sp. nov., holotype, female (SCAU 3049046) A dorsal habitus B lateral habitus C head and mesosoma, dorsal view D head and mesosoma, lateral view E head, anterior view F antenna G metasoma, dorsal view H metasoma, ventral view.
Figure 3 from: Linh NN, Hang PLB, Hue HTT, Ha NH, Hanh HH, Ton ND, Hien LTT (2022) Species discrimination of novel chloroplast DNA barcodes and their application for identification of Panax (Aralioideae, Araliaceae). PhytoKeys 188: 1-18. https://doi.org/10.3897/phytokeys.188.75937
Figure 3 Successful identification rates among analyzed barcodes by Best Match and Best Close Match function.
Figure 2 from: Linh NN, Hang PLB, Hue HTT, Ha NH, Hanh HH, Ton ND, Hien LTT (2022) Species discrimination of novel chloroplast DNA barcodes and their application for identification of Panax (Aralioideae, Araliaceae). PhytoKeys 188: 1-18. https://doi.org/10.3897/phytokeys.188.75937
Figure 2 Percent relative abundance in distribution of intra/interspecific K2P pairwise distances estimated for markers.
Figure 5 from: Linh NN, Hang PLB, Hue HTT, Ha NH, Hanh HH, Ton ND, Hien LTT (2022) Species discrimination of novel chloroplast DNA barcodes and their application for identification of Panax (Aralioideae, Araliaceae). PhytoKeys 188: 1-18. https://doi.org/10.3897/phytokeys.188.75937
Figure 5 Percentage of variable sites, mean pairwise distances, and correct classification percentages of all markers and combinations
Figure 4 from: Linh NN, Hang PLB, Hue HTT, Ha NH, Hanh HH, Ton ND, Hien LTT (2022) Species discrimination of novel chloroplast DNA barcodes and their application for identification of Panax (Aralioideae, Araliaceae). PhytoKeys 188: 1-18. https://doi.org/10.3897/phytokeys.188.75937
Figure 4 Results of mPTP species delimitation analysis for several markers based on ML trees A Species delimitation for marker trnQ-rps16B Species delimitation for the combination of markers 1+3+4. Bootstrap values are displayed on the branches. The red branches represent supported species delimitations. Sequences highlighted in orange originate from this study.
Figure 1 from: Linh NN, Hang PLB, Hue HTT, Ha NH, Hanh HH, Ton ND, Hien LTT (2022) Species discrimination of novel chloroplast DNA barcodes and their application for identification of Panax (Aralioideae, Araliaceae). PhytoKeys 188: 1-18. https://doi.org/10.3897/phytokeys.188.75937
Figure 1 Distribution of Panax in Vietnam and sample locations. P. vietnamensis (green) collected in Quang Nam and Kon Tum Provinces. P. vietnamensis var. fuscidiscus (brown) collected in Lai Chau Province. Panax sp. Puxailaileng (pink) collected in Nghe An Province. P. bipinnatifidus (blue) and P. stipuleanatus (yellow) collected in Lao Cai Province. The natural distribution of P. vietnamensis, P. vietnamensis var. fuscidiscus, and Panax sp. are marked as green, brown, and pink, respectively. The wild habitat for P. bipinnatifidus and P. stipuleanatus is shown in yellow, and the purple area represents the distribution region of P. vietnamensis var. langbiangensis (not included in this study).
Supplementary material 2 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Neighbor-joining topology
Supplementary material 1 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Barcode analysis using the BOLD workbench
Figure 1 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Figure 1 Various woodlouse species of Germany AOniscus asellus Linnaeus, 1758 BArmadillidium nasatum Budde-Lund, 1885 CTrachelipus ratzeburgii (Brandt, 1833) DMesonicus alpicola (Heller, 1858) EPhiloscia muscorum (Scopoli, 1763) FHaplophthalmus mariae Strouhal, 1953 GArmadillidium opacum (C. Koch, 1841) HPlatyarthrus hoffmannseggii Brandt, 1833. Scale bar: 1 mm. Photograph credits: A–G Jörg Spelda H Armin Rose.
Supplementary material 3 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Neighbor-joining topology of the BOLD workbench including BIN analysis
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
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The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
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